LOCUS BC038711 1730 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens UDP-glucose ceramide glucosyltransferase, mRNA (cDNA
clone MGC:33797 IMAGE:5295561), complete cds.
ACCESSION BC038711
VERSION BC038711.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507810.
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000052063"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33797 IMAGE:5295561"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1730
/gene="UGCG"
/gene_synonym="GCS"
/db_xref="GeneID:7357"
/db_xref="HGNC:HGNC:12524"
/db_xref="MIM:602874"
CDS 452..1636
/gene="UGCG"
/gene_synonym="GCS"
/codon_start=1
/product="UDP-glucose ceramide glucosyltransferase"
/protein_id="AAH38711.1"
/db_xref="GeneID:7357"
/db_xref="HGNC:HGNC:12524"
/db_xref="MIM:602874"
/translation="MALLDLALEGMAVFGFVLFLVLWLMHFMAIIYTRLHLNKKATDK
QPYSKLPGVSLLKPLKGVDPNLINNLETFFELDYPKYEVLLCVQDHDDPAIDVCKKLL
GKYPNVDARLFIGGKKVGINPKINNLMPGYEVAKYDLIWICDSGIRVIPDTLTDMVNQ
MTEKVGLVHGLPYVADRQGFAATLEQVYFGTSHPRYYISANVTGFKCVTGMSCLMRKD
VLDQAGGLIAFAQYIAEDYFMAKAIADRGWRFAMSTQVAMQNSGSYSISQFQSRMIRW
TKLRINMLPATIICEPISECFVASLIIGWAAHHVFRWDIMVFFMCHCLAWFIFDYIQL
RGVQGGTLCFSKLDYAVAWFIRESMTIYIFLSALWDPTISWRTGRYRLRCGGTAEEIL
DV"
BASE COUNT 428 a 408 c 464 g 430 t
ORIGIN
1 gggggcggga cgcgccgagg agtggggcgc gagccgccgg ttttgattag tgcgcggagc
61 tgcggcggtg gagctgctcg gccgggagcc cggcggcgag acggagaggc ggcggaggtg
121 cccgcgcgca gggtctggtg ggcggccgcg aggctcggga gaggcgaacc ggagcgcggg
181 cccgcggtcg ccccgaccag agccgggaga ccgcagcacc cgcagccgcc cgcgagcgcg
241 ccgaagacag cgcgcaggcg agagcgcgcg ggcgggggcg cgcaggccct gcccgcccct
301 tccgtcccca ccccccctcc gccctttcct ctccccgcct tcctctcgcc tcccgcgccc
361 ccgcaccggg cgcccaccct gtcctcctcc tgcgggagcg ttgtccgtgt tggcggccgc
421 agcgggccgg gccggtccgg cgggccgggg gatggcgctg ctggacctgg ccttggaggg
481 aatggccgtc ttcgggttcg tcctcttctt ggtgctgtgg ctgatgcatt tcatggctat
541 catctacacc cgattacacc tcaacaagaa ggcaactgac aaacagcctt atagcaagct
601 cccaggtgtc tctcttctga aaccactgaa aggggtagat cctaacttaa tcaacaacct
661 ggaaacattc tttgaattgg attatcccaa atatgaagtg ctcctttgtg tacaagatca
721 tgatgatcca gccattgatg tatgtaagaa gcttcttgga aaatatccaa atgttgatgc
781 tagattgttt ataggtggca aaaaagttgg cattaatcct aaaattaata atttaatgcc
841 aggatatgaa gttgcaaagt atgatcttat atggatttgt gatagtggaa taagagtaat
901 tccagataca cttactgaca tggtgaatca aatgacagaa aaagtaggct tggttcacgg
961 gctgccttac gtagcagaca gacagggctt tgctgccacc ttagagcagg tatattttgg
1021 aacttcacat ccaagatact atatctctgc caatgtaact ggtttcaaat gtgtgacagg
1081 aatgtcttgt ttaatgagaa aagatgtgtt ggatcaagca ggaggactta tagcttttgc
1141 tcagtacatt gccgaagatt actttatggc caaagcgata gctgaccgag gttggaggtt
1201 tgcaatgtcc actcaagttg caatgcaaaa ctctggctca tattcaattt ctcagtttca
1261 atccagaatg atcaggtgga ccaaactacg aattaacatg cttcctgcta caataatttg
1321 tgagccaatt tcagaatgct ttgttgccag tttaattatt ggatgggcag cccaccatgt
1381 gttcagatgg gatattatgg tatttttcat gtgtcattgc ctggcatggt ttatatttga
1441 ctacattcaa ctcaggggtg tccagggtgg cacactgtgt ttttcaaaac ttgattatgc
1501 agtcgcctgg ttcatccgcg aatccatgac aatatacatt tttttgtctg cattatggga
1561 cccaactata agctggagaa ctggtcgcta cagattacgc tgtgggggta cagcagagga
1621 aatcctagat gtataactac agctttgtga ctgtatataa aggaaaaaag agaagtatta
1681 taaattatgt ttatataaat gcttttaaaa atctaaaaaa aaaaaaaaaa
//