LOCUS BC038668 1745 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens RAB, member RAS oncogene family-like 5, mRNA (cDNA
clone MGC:41787 IMAGE:5261016), complete cds.
ACCESSION BC038668
VERSION BC038668.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 12232462.
FEATURES Location/Qualifiers
source 1..1745
/db_xref="H-InvDB:HIT000095303"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41787 IMAGE:5261016"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1745
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/db_xref="GeneID:64792"
CDS 1056..1382
/gene="RABL5"
/gene_synonym="DKFZp761N0823"
/gene_synonym="FLJ13225"
/gene_synonym="FLJ14117"
/codon_start=1
/product="RABL5 protein"
/protein_id="AAH38668.1"
/db_xref="GeneID:64792"
/translation="MKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIA
HHKPGSGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDRE
EMSIMT"
BASE COUNT 423 a 446 c 446 g 430 t
ORIGIN
1 aaaacgaaag cggccaagta gagctccgtc ctgacgcgcc gcctcccgtg ggctccggcc
61 ggctaagccg cggcggacaa ctatgctgaa agccaagatc ctcttcgtgg ggccttgcga
121 gagtggaaaa actgttttgg ccaactttct gacagaatct tctgacatca ctgaatacag
181 cccaacccaa ggagtgaggt gagccctgac aaatctgtgt cccagagtgt ccaactggct
241 cggcagggag gctcattcct ctagtcccgg tgctctggga ggtcaaggcg ggaggatcgc
301 ctgaggcctg ggcaatatgg ggagaccccg tctcaactag aaatagaaca ttagccgggt
361 gtgttggcgt gtgtctgtgg tctcagctac atgttaggtt gaagcagaag gattgtttga
421 ggccgggagt tggaggctgc agtgagctgt gatcgtgcca ctgcactcca gcctgggtga
481 cagagtgaga ccctgtctca aaacaaaatt aataataaaa caattttaaa agactgccca
541 gccatcaccc acttcctact tttgttgctg ttggcattcc aaaagtgtaa tgcagcctca
601 ttattggtgc tgctactgtt cgtctttttt ttttgggatg gagtctcgtc ctgtcgctga
661 ggctggagtg tggtggcacg atctcagctc actgcagtct ccgcctcccg ggttcaagcg
721 attctcctgc cttggcctcc acagtggctg agatcacggg tgcacgccat catgcccggc
781 taattctttt gtttttggtg tagcaggggt ttcaccatgt tggccaggct ggtctcgaac
841 tcctgacctc aggtgatctg cccgccttgg cctcccagac tgctgagatt acaggcgtga
901 gccactgcac ccagcctact gctcttcttt ttccttttag gatcctagaa tttgagaacc
961 cgcatgttac cagcaacaac aaaggcacgg gctgtgaatt cgagctatgg gactgtggtg
1021 gcgatgctaa gtttgagtcc tgctggccgg ccctgatgaa ggatgctcat ggagtggtga
1081 tcgtcttcaa tgctgacatc ccaagccacc ggaaggaaat ggagatgtgg tattcctgct
1141 ttgtccaaca gccgtcctta caggacacac agtgtatgct aattgcacac cacaaaccag
1201 gctctggaga tgataaagga agcctgtctt tgtcgccacc cttgaacaag ctgaagctgg
1261 tgcactcaaa cctggaagat gaccctgagg agatccggat ggaattcata aagtatttaa
1321 aaagcataat caactccatg tctgagagca gagacaggga ggagatgtca attatgacct
1381 agccagcctt cacctgggac tgccacatcc ccagtgaaat cagcatgttt ctcggtgcag
1441 atctgaaatc acatccagct cctgatgttt tcttctccct ctgactgcag aggaagtgtt
1501 cctacctgca ggaaggcacc tgtcacacag ggcgttcact cagaccatct gtgctctgcc
1561 ctgagttcag ttgagaaaat cctattatca aatttggatt tcctggcccc agaacttccc
1621 aaagacctgt aaaatggagg gatttaccac ctcacatatg tccagttaaa cagtttgtgg
1681 acttgtaacc gtcgcagccc aatgatacaa cagtagttta atcacgtgca aaaaaaaaaa
1741 aaaaa
//