LOCUS BC038667 3906 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens KIAA1712, mRNA (cDNA clone MGC:33587 IMAGE:4823994),
complete cds.
ACCESSION BC038667
VERSION BC038667.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3906)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3906)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: l Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30794213
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..3906
/db_xref="H-InvDB:HIT000052058"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33587 IMAGE:4823994"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3906
/gene="KIAA1712"
/gene_synonym="PS1TP3"
/db_xref="GeneID:80817"
/db_xref="HGNC:HGNC:29356"
CDS 306..1478
/gene="KIAA1712"
/gene_synonym="PS1TP3"
/codon_start=1
/product="KIAA1712 protein"
/protein_id="AAH38667.1"
/db_xref="GeneID:80817"
/db_xref="HGNC:HGNC:29356"
/translation="MATGDLKRSLRNLEQVLRLLNYPEEVDCVGLIKGDPAASLPIIS
YSFTSYSPYVTELIMESNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFA
EWKIQIVCDILNCVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDI
SGRFMTSGKKKAVVIRHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKV
PEIKAEQQDVNVNPEITALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTW
TNLLSRVTLLETEMLLSKKNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPL
SSGYSTASSDSTPRASTVNYCGLNEISEETTIQKMERMKKMFEETAELLKCPNHYL"
BASE COUNT 1205 a 696 c 799 g 1206 t
ORIGIN
1 agagcacaga gaagctccca gctttgaagg tcttgcggtg gtgcgtggcg ggcaggaacc
61 cacaattcca aatacaaacg gtcggcgcga gaagcgcttc tgggcgcagg cgcctggctg
121 tagcgactgg ttgcgggagg ctggactctg gtgactgtaa gcatcaagtg tacctgattt
181 gtgaacctat cttgcttcag ttggtttcct cctaaatatt aggcagatgg gattggctgg
241 tctgtgctct gctaggtgaa aaattagacg atttcaagaa ttggagctga atctgatgtt
301 aagtaatggc aacaggtgac ttaaaaagaa gcttacggaa cctagaacag gtgctccgct
361 tgctaaatta tcctgaagag gtggactgtg taggtttgat aaagggagac ccagcagcat
421 ctttgcccat catcagctat tcttttacct catactcacc ttatgtaaca gaacttataa
481 tggaatccaa tgtagagctc atagcaaaaa atgacttgcg ctttatagat gctgtctata
541 agcttcttcg tgatcaattt aattataaac caattttgac aaaaaagcag tttatccaat
601 gtgggtttgc agaatggaaa atccaaattg tttgtgatat tttgaattgt gtgatgaaaa
661 agcacaagga attaagcagt cttcagaaga ttccatcaca acaaagaaag aaaatcagtt
721 ctggtaagtc agaacctcct ttgggcaatg agaaaatatc tgcagaggct gttggcgttg
781 atatcagtgg caggtttatg acctcaggaa agaagaaagc tgtggtgatt cgtcacttgt
841 ataatgaaga taatgttgac atttctgagg atacattaag tccaataaca gatgttaatg
901 aagcagttga tgtgtctgac ttaaatgcta ctgaaataaa gatgcctgaa gtaaaggttc
961 ctgaaatcaa ggctgagcaa caggatgtaa atgttaatcc tgagattact gcactacaaa
1021 ctatgcttgc tgaatgccaa gaaaatctta agaaactgac ttcgatagag aaaaggttag
1081 actgtttgga acaaaaaatg aaaggaaaag tgatggtaga tgaaaacacc tggactaatc
1141 ttcttagtcg tgtcactctt cttgaaacag aaatgctttt gtctaaaaag aatgatgaat
1201 ttatagagtt taatgaagtt agtgaagact acgcttcttg tagtgacatg gaccttctga
1261 atcctcacag aaaaagcgaa gtagagaggc cagcaagtat tcctctgtcc tctggctata
1321 gtacagcatc atcagattca actcccagag cctctactgt taattactgt ggtttgaatg
1381 agatttcaga ggaaacaaca atccagaaaa tggaaaggat gaaaaaaatg tttgaagaaa
1441 ctgcagagtt actgaaatgt ccaaatcact acttgtagga ttttctacat gaactttttt
1501 ctaggacttt ggttactata catattgtat attttaagaa ttctttatac aattttaata
1561 tactgcaata ctgcagtttt tgacaatttg gattccattt ggtatatgaa tttttgcatt
1621 cattattgaa taactctttt aatatttttg agcaatgatt atactgcttt accttgtgtc
1681 actttttttt tttttaggaa aaactcatgt tccagtatat ttctcttaca gagtgaagtc
1741 attacagcac tgtatttctg tgttgacatt tgttggcagt gtgctaagta atgtttttta
1801 aagcacaggc ttaaggacta tggtttacat cctgttggaa acattccaaa tgggacttgt
1861 gtattatacc caggaggctc tcatatatac catcttggca tctgtactga tgaataagtt
1921 ataatgaaca gttaaaaatg ctcattgaaa attaaataaa acaaaaaggc agttatttca
1981 tgcttggtca aaaacatcaa tacctttcca attaacactg agaaattaag gttaagattc
2041 tccttttgta ctgggaaaca ggctggagga ctatggtcct caagtttaga ccaagaggac
2101 tatggtctca aggttcacca tgagaaatgt gttgaacatt ttagtatgct ctattgtata
2161 atttttttgg agggggggat ggagtttcgc tgttgttgcc caggctggag tgcaatagca
2221 cgatcttggc tcaccgcaac ctctgcctac cgggttcaag tgattcttgt gcctcagcct
2281 cctgagtagc tgggattata ggcatgcacc accatgccca gctaattttg tatttttatt
2341 agagacaggg tttctccgtg ttggtcaggc tggtctcaaa ctcctgacct caggtgatct
2401 gcctgtcttg gcctccggcg taacactttt taagaccagt gtaacagaaa gagaatgtag
2461 ccattctagc caccgttaaa agatacacag tgaggtgttg tgttttgttt ttttaatgat
2521 gaaaagttac acattttttg gagagaaaag tcttagctga aggtaaatca atggaaaaat
2581 gaaatttatt tttaatatta ctactatatg aattatcttt ttttaaactt gtagataaaa
2641 gtgttccagt aatcagaaaa tcctcaagaa aattgacttc attatttgga aggaaaatta
2701 gtattttttt taatattata tggaccatct gattatattt tatttattca tctatttatg
2761 ggtctcactc tattgcccag gctggagtgc actggcgtga tctcggctca ctgcaccttc
2821 tgcctaccga gttcaagcga ttcttgtgct tcagcctcct gagtagctgg gactataggc
2881 ctgtaccgtc atgcctggct aatttttgta tttttgtaga gacagggttt caccatgttg
2941 cccagtctgt tctcaaactc gtgagctaaa gctactcgcc cacctggatg tcccaaagtg
3001 ctagattcca tggaattttc ctgcatggag tgctacatcc tcttgttcca gtctcagctg
3061 gctgctccgt gggcatactt catacctttc atcacagagc tttgcttggc ctctctcctg
3121 tgtgtaatct ctgtttcttg gatcctgtgc ttaccttttc ctgctgtact ctgatgtttc
3181 agtgaagctc atccacgaag tccagaattc tgcctggaaa ccagcttcct cctcagctcc
3241 agctctttta atgggcatat caaaactgat gactttttcc ttcctgctac atgggtaaca
3301 cttagttgtt tgtctaattt ctattttcca gaaatttctc aaaatgtctg ctgatagccc
3361 ctcactcata tttttcatgt gggtttatag ctttcatatt tctttattat tgtaaatggg
3421 ggctgtggaa ggtgagaaaa cacatgcttt cttaaaacag aagctctctc cttcattaat
3481 ttaaatattt ttatcggctc tagaaaatgc ataaggttag tacaagatca gtagagagaa
3541 agtcaaagat tacagaagtg ctgaagcaga ccattcttcc tttcttccca atgtctatta
3601 agatcacaca taggtaaact gttacaaatc cagaatggtg aaagagtcca acaatggctg
3661 agggaagtag aggttaagat atagctcaac agtgaaagta gcagggaaag agctgggcaa
3721 ggccaagacc atcttttgta ccgttggtac agtaggctaa aggtacggtg ttccatatta
3781 aatacagcaa tatgaagaaa aataaattaa gtcccttata cctaaaaaaa aaaaaaaaaa
3841 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa ggaaaaaaaa
3901 aaaaaa
//