LOCUS BC038590 1711 bp mRNA linear HUM 24-JUL-2006 DEFINITION Homo sapiens SRY (sex determining region Y)-box 18, mRNA (cDNA clone MGC:46062 IMAGE:5589289), complete cds. ACCESSION BC038590 VERSION BC038590.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1711) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1711) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-OCT-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: f Column: 18. FEATURES Location/Qualifiers source 1..1711 /db_xref="H-InvDB:HIT000052054" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46062 IMAGE:5589289" /tissue_type="Ovary, pooled from 3 adults" /clone_lib="NIH_MGC_125" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1711 /gene="SOX18" /gene_synonym="HLTS" /db_xref="GeneID:54345" /db_xref="HGNC:HGNC:11194" /db_xref="MIM:601618" CDS 113..1267 /gene="SOX18" /gene_synonym="HLTS" /codon_start=1 /product="SRY (sex determining region Y)-box 18" /protein_id="AAH38590.1" /db_xref="GeneID:54345" /db_xref="HGNC:HGNC:11194" /db_xref="MIM:601618" /translation="MQRSPPGYGAQDDPPARRDCAWAPGHGAAADTRGLAAGPAALAA PAAPASPPSPQRSPPRSPEPGRYGLSPAGRGERQAADESRIRRPMNAFMVWAKDERKR LAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRVQHLRDHPNYKYRPRRKK QARKARRLEPGLLLPGLAPPQPPPEPFPAASGSARAFRELPPLGAEFDGLGLPTPERS PLDGLEPGEAAFFPPPAAPEDCALRPFRAPYAPTELSRDPGGCYGAPLAEALRTAPPA APLAGLYYGTLGTPGPYPGPLSPPPEAPPLESAEPLGPAADLWADVDLTEFDQYLNCS RTRPDAPGLPYHVALAKLGPRAMSCPEESSLISALSDASSAVYYSACISG" BASE COUNT 256 a 682 c 521 g 252 t ORIGIN 1 caccgccatc cgccctcccg gcctggcctg cccttgcgcc cggctcccca gtgcccgccg 61 cccgcccacc gcgctcccgc gctccgttcc gcccaggccg cgcccagctg gaatgcagag 121 atcgccgccc ggctacggcg cacaggacga cccgcccgcc cgccgcgact gtgcatgggc 181 cccgggacac ggggccgccg ctgacacgcg cggcctcgcc gccggccccg ccgccctcgc 241 cgcgcccgcc gcgcccgcct cgccgcccag cccgcagcgc agtcccccgc gcagccccga 301 gccggggcgc tatggcctca gcccggccgg ccgcggggaa cgccaggcgg cagacgagtc 361 gcgcatccgg cggcccatga acgccttcat ggtgtgggca aaggacgagc gcaagcggct 421 ggctcagcag aacccggacc tgcacaacgc ggtgctcagc aagatgctgg gcaaagcgtg 481 gaaggagctg aacgcggcgg agaagcggcc cttcgtggag gaagccgaac ggctgcgcgt 541 gcagcacttg cgcgaccacc ccaactacaa gtaccggccg cgccgcaaga agcaggcgcg 601 caaggcccgg cggctggagc ccggcctcct gctcccggga ttagcgcccc cgcagccacc 661 gcccgagcct ttccccgcgg cgtctggctc ggctcgcgcc ttccgcgagc tgcccccgct 721 gggcgccgag ttcgacggcc tggggctgcc cacgcccgag cgctcgcctc tggacggcct 781 ggagcccggc gaggctgcct tcttcccacc gcccgcggcg cccgaggact gcgcgctgcg 841 gcccttccgc gcgccctacg cgcccaccga gttgtcgcgg gaccccggcg gttgctacgg 901 ggctcccctg gcggaggcgc tcaggaccgc gccccccgcg gcgccgctcg ctggcctgta 961 ctacggcacc ctgggcacgc ccggcccgta ccccggcccg ctgtcgccgc cgcccgaggc 1021 cccgccgctg gagagcgccg agccgctggg gcccgccgcc gatctgtggg ccgacgtgga 1081 cctcaccgag ttcgaccagt acctcaactg cagccggact cggcccgacg cccccgggct 1141 cccgtaccac gtggcactgg ccaaactggg cccgcgcgcc atgtcctgcc cagaggagag 1201 cagcctgatc tccgcgctgt cggacgccag cagcgcggtc tattacagcg cgtgcatctc 1261 cggctaggcc gccggcgccg cccgggtccc tgcagcgctt cctcccgcag cccccgcgac 1321 cgatccgacc gcgtcgctgc cgctctgctc tctcatacgc gtgtatgttt ggttccatgt 1381 cacagccccc taggagccag tgatgctcgg ccttgcgccc gttccacctc ccaggccacc 1441 cttcctgggc ttctgggcca cctgccctcg gggggcccct gcgagggtgc ctggagttcc 1501 cacgtgtccc ggggcttttc caggaagccc gagcccagga cctgttggca gagttgccag 1561 ggttacattt ttgaagcacc tgctcctttt cttgcagtgt attttctaca accagattgt 1621 attaatattt tttactttgc ccttttaaaa aatataccta atacaatata tttaattttt 1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //