LOCUS BC038583 1020 bp mRNA linear HUM 29-JUL-2008 DEFINITION Homo sapiens family with sequence similarity 178, member B, mRNA (cDNA clone IMAGE:5229455), complete cds. ACCESSION BC038583 VERSION BC038583.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1020) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1020) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-OCT-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: b Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31745175 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1020 /db_xref="H-InvDB:HIT000095292" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5229455" /tissue_type="Pancreas, Spleen, adult pooled" /clone_lib="NIH_MGC_120" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1020 /gene="FAM178B" /db_xref="GeneID:51252" /db_xref="HGNC:HGNC:28036" CDS 212..571 /gene="FAM178B" /codon_start=1 /product="family with sequence similarity 178, member B" /protein_id="AAH38583.3" /db_xref="GeneID:51252" /db_xref="HGNC:HGNC:28036" /translation="MRPSSLRQYLDSVPLPPCQEQQPKASAELDHKACYLCHSLLMLA GVVVSCQDITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKDLATQTYIRWQEL LTHCQPQAQYFSPWKDI" BASE COUNT 251 a 333 c 254 g 182 t ORIGIN 1 ctggggctgg atctgggcac agcaatttgc agggcactgc tgggcaggag tccctgatgg 61 ccaagctgct gggctctgta tctcccacaa gctgcagcgg aggccccatg gagcaggagc 121 agaagcacac gttggagaac tgaacttgaa ggacaggact tacagcattg aggtcacaca 181 gctgtcctcg ctcagccggc tcctgggcct catgaggcca tcatctctca ggcaatacct 241 ggactctgtg cccttgccac cctgccagga gcaacagcca aaggctagtg ccgagctaga 301 ccacaaggcc tgctacctgt gccacagctt gctgatgctg gccggggtag ttgttagctg 361 ccaggacatc actccagacc agtggggcga gctgcagctg ctgtgcatgc agttggaccg 421 ccacatcagc acgcagatcc gggagagccc ccaggccatg caccgcacca tgctcaagga 481 cctggctacc cagacctaca tccgttggca ggagctgctg acccactgcc agccccaggc 541 ccagtatttc agcccctgga aagacatcta aagggacagg gtcagggcag cccagggctc 601 ctggcttcag caggaagtga acaggctcag ggaactggag gaagcgaagc atcaaggcca 661 gaggaggcca catgctgacc agcctgatga ggcaagagcc tgcccctgcc accgccccga 721 cccctctcct ctctgcaaga gcctgcctct gccaccgccc cgaccccctc tcctctcagc 781 aagggatggg cctctctgcc tcgcccaccc ctcagccctc ctcccagcca tctcctcttc 841 cctaaggcct ctgtctccat agctctggtt tccctgggcc tcagtcctcc ccaccctcct 901 tcctctgtct ccctgtcact aatgtgaggt ttctttgtgc acattaaagt cttctttcag 961 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //