LOCUS BC038390 2663 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens family with sequence similarity 108, member B1, mRNA
(cDNA clone MGC:21098 IMAGE:4748883), complete cds.
ACCESSION BC038390
VERSION BC038390.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2663)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2663)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: n Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 71051599.
FEATURES Location/Qualifiers
source 1..2663
/db_xref="H-InvDB:HIT000095188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21098 IMAGE:4748883"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2663
/gene="FAM108B1"
/gene_synonym="CGI-67"
/gene_synonym="RP11-409O11.2"
/db_xref="GeneID:51104"
/db_xref="HGNC:HGNC:24278"
CDS 113..979
/gene="FAM108B1"
/gene_synonym="CGI-67"
/gene_synonym="RP11-409O11.2"
/codon_start=1
/product="family with sequence similarity 108, member B1"
/protein_id="AAH38390.2"
/db_xref="GeneID:51104"
/db_xref="HGNC:HGNC:24278"
/translation="MNNLSFSELCCLFCCPPCPGKIASKLAFLPPDPTYTLMCDESGS
RWTLHLSERADWQYSSREKDAIECFMTRTSKGNRIACMFVRCSPNAKYTLLFSHGNAV
DLGQMSSFYIGLGSRINCNIFSYDYSGYGASSGKPTEKNLYADIEAAWLALRTRYGIR
PENVIIYGQSIGTVPSVDLAARYESAAVILHSPLTSGMRVAFPDTKKTYCFDAFPNID
KISKITSPVLIIHGTEDEVIDFSHGLALFERCQRPVEPLWVEGAGHNDVELYGQYLER
LKQFVSQELVNL"
BASE COUNT 821 a 474 c 507 g 861 t
ORIGIN
1 cggacggcgc ccggagcgcg gatctcgcct tgtggaggac agcgcgtcgg ctgcggttct
61 ctctcgaccc cttctgcccg gcgcttcggc ccgggccgct caggtgcaga gcatgaataa
121 tctttcattt agtgagctat gttgcctctt ctgctgtcca ccttgtccag ggaagattgc
181 ttcaaaatta gcgtttttgc cacctgatcc aacttacaca ctgatgtgtg atgaaagcgg
241 aagccgttgg actttacatc tgtctgaacg agcagactgg cagtattctt ctagagaaaa
301 agatgctatt gagtgtttca tgactagaac cagtaaaggc aacagaattg cttgtatgtt
361 tgtacgttgt tcacccaatg cgaaatacac tttactcttc tcacatggaa atgctgttga
421 tcttggtcaa atgagcagct tttacatagg actaggatca cggattaatt gtaatatatt
481 ctcatatgat tattctggat atggtgccag ttccgggaaa cccacagaga agaacctcta
541 tgcagacatt gaagctgctt ggcttgctct taggacaaga tatggcattc gccctgaaaa
601 tgtgattata tatggccaaa gtatagggac agtaccgtct gtggatcttg ctgctcgata
661 tgagagtgct gctgttattc ttcattctcc tctgacttcg ggaatgcgag ttgcctttcc
721 tgataccaag aagacctact gttttgatgc attcccaaac attgacaaaa tctctaagat
781 aacctctcca gtattaataa ttcatgggac tgaagatgaa gtcattgact tttcacatgg
841 cctcgcattg tttgaacgtt gccaaagacc tgtggagcct ctctgggttg aaggagcagg
901 tcacaatgat gtggaacttt atggacagta tcttgaaagg ttgaaacagt ttgtgtcaca
961 ggaactggta aatttgtaaa atattctgta aatttgctac tgggttttcc tttcttgctg
1021 aactgcactc tttggtaaat aacataaaac ctgaaggttt tgtttgcaaa tcatgtcagt
1081 tgccttcata aatgtacagg taatgatttg ttaacagact taatgaaggt tttaattacc
1141 agaactaaaa actggaaata acagtaccgt gcagtcaggc tgtgtaattt atattttttc
1201 tgtgaatttt tttttaacat caagatgagt actgtatgag attttaattc tataaaatca
1261 aatgctgtaa aagtattgcc aaatgctttt gcatactaga aacaaattta taaatatttt
1321 taaaacatct caatatatta aatcttatcc tggaatacaa ctgtaatatt ttgaaaaaag
1381 ctatgtatct aaagcaattt aagtactcat aatggaatga actgtaaaag agatttaaaa
1441 ccatgcaagt tcactagaat taacctaaac cctgttgtac agggatagag gtttaaagtt
1501 attttattgt aaaatacatt gaattttctg tatactctga ttacatacat ttatccttta
1561 aaaaagatgt aaatcttaat ttttatgcca tctattaatt taccaatgag ttaccttgta
1621 aatgagaagt catgatagca ctgaatttta actagttttg acttctaagt ttggtactgt
1681 gaggcaagta cttaaaattt tcatgctggt tacttaaaag gcatttagag atttcaagaa
1741 tgattttgta tacgatgttt taaattttga ctgatctcat agtcttcata gaattgcagt
1801 agtcttcatt gtatgaaatc ccgaaagtcc atgagttgat cttaaagacc actaacagac
1861 tggctatcag atcccttttc actttggcta tttttttcat tttttgagat ggagtcttgc
1921 tgtgtcactg aggctggagt gcagtggcgc gatcttgact cactgcaacc tctgcctccc
1981 aggatcaagt gattctcctg cctcagcctc ctgagtagct ggtattacag atgcttgcca
2041 ccacgcctgg ctaatttttg tatttttagt agagacaggg ttttgccatg ttgatcaggc
2101 tggtcttgaa ctcctgacct catgatctgc ccttggcctc ccaaagtgtc ggaattacag
2161 gcatgagcca ctgcgcctgg cccactttag ctatttttaa aaataggacc tattgttttg
2221 gattactatc tgagaatttc atggattcac tcctgggtat aggagataag aatacgttta
2281 attcataact tttatattaa ccaatatagt aaaaaaataa agctcacaca tacaaaaact
2341 aagttgcctt tccttgaatg aaccctgtct gaataaaaca atgaaaaata aaaataaaat
2401 taatggtatg tagtctaatt tgtaaatgaa tgaatatgga aataatacac actgtggata
2461 tattttaagg ccttatgtag ttttaattgt tctgctcgtt ccgtggttat gtttaagact
2521 atagtatatg actctcttca aagtatatca agtattgtga atgctttggt tcagatgtgt
2581 caaattaaca gtaaaacaac aaatatacca ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaa
//