LOCUS BC038350 1588 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:4537875, with apparent retained
intron.
ACCESSION BC038350
VERSION BC038350.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1588)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1588)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: i Column: 8
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1588
/db_xref="H-InvDB:HIT000095165"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4537875"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 547 a 265 c 334 g 442 t
ORIGIN
1 gtaaaccagc ccttagtttc aggattcctg gagcagtaca gagctcattt tgatctctgt
61 atttagatag cccagatagc atctgtgaat ttccttggtc ttcctcagtg gcagggctcc
121 gcatctgcca tgcctcatcc ttggatgttt atttttagta agttgcagtg agctcacttc
181 tgactgcttc atttcccgca gccatcctgg gccatgggtg gtgagttctg ttacttgctg
241 cttggcagca gagctagttt gtctcgtagt attcttgcat tgttaatcct atcttgacag
301 tgccaagatc cataagaact tgggaccaag gggattttga ttcctaactt acagaattaa
361 aaacaaagta tattataatt ttaaagctat gccatgcaaa gataagtagt aatacgctaa
421 taaatactaa gccaagtagg agataacagg attaaggtag ttcatctaaa acttcagtgt
481 cactgcccac tgctgtcgtg gctgcttgct cagatgaggt tttttggggc caactgattc
541 ctaacaaatt tgagagcttc tgtagcagtg tatctattag tgcagcttct ttctgagtat
601 tgaagacaaa aagagaaaag tgagaaaatt gaaattactg ctaatagtgg agtaaaaaaa
661 gtaccaaaga tttttaaaaa attagtaaat gtaaagatac tatttcttta ataatttgca
721 gtcaggcatt ggagtgtttc cactaatggt tgcgagccaa ctatttatag gacaatggct
781 atagaatatt atgtagtctt ataaattggg tttcctagga agatagctgg cagagctttt
841 gaaactaata aagggaatat gatactgtgc attataaatt atgtcagccc gtcatcttag
901 gggcagttac agtggagctt tcccagtgat ataacagcat gctagtttat cttttagtta
961 cctaccttaa gcgactttct ttcttttcca aaggccatga gaatggccga aacgaaaaga
1021 ttaattacca caagtaccat caagatgaca ctggtgagga tcagaaaggt gcccaggact
1081 gggtctaaag cgaaaacctg ggaaaacaat aagaacactt gcagtgactg acaatttagt
1141 ttatacttta caaacataag ctatatgcta gtgtttggga tcttatcaga agaaaagctt
1201 atccgaagga aacttaggga gagagtcaaa agataataag aaggaaaata cttttaaatg
1261 gacagaagag caggaatgac tcattttaag gaggttaaga taattgtgac tgcagggctt
1321 tcacaagaaa acaggtgagt tgcagtggaa ttggaaatga ttcaaatgtc acatgagttt
1381 tggcaaaaaa tacatctaat catggaagct aaaagtggga ggggggtaag caaacactga
1441 aagattaaat gcataccaga aatgagaatg cacactgtct ctgccatatc aagaaactac
1501 aaccctaaac acaggagcat tccaataaaa gttaacaggt tggccacaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//