LOCUS BC038298 5529 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:5265156, containing frame-shift
errors.
ACCESSION BC038298
VERSION BC038298.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5529)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5529)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32189360
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..5529
/db_xref="H-InvDB:HIT000095160_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5265156"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1720 a 986 c 1119 g 1704 t
ORIGIN
1 agcggagtgc tacatgatcc gaatactaag cagagcgagt gccgggctga gtgtaagaca
61 ctgaagacac tgcagagcaa ggtgcttatt ccagaggcgt tacaaaacat ggagattaaa
121 gaccagggag cccaaatgga gccgctgctg cctacgagaa atgatgaaga agcagttgtg
181 gatagaggtg gaactcgttc tattctcaaa acacactttg agaaagaaga tttagaaggt
241 catcgaacac tatttattgg agtacatgtg cccttgggag gaagaaaaag ccatcgacgt
301 cacaggcatc gtggtcataa acacagaaag agagacagag aaagagattc aggattagag
361 gatggaaggg agtcaccttc ttttgacacc ccatcacaga gggtacagtt tattcttgga
421 accgaggatg atgacgagga acacattcct catgaccttt tcacagaact ggatgagatt
481 tgttggcgtg aaggtgagga cgctgagtgg cgagaaacag ccaggtggtt gaagtttgaa
541 gaagatgtgg aagatggagg agaaaggtgg agcaagcctt atgtggctac tctttcattg
601 cacagcttgt ttgaattgag aagttgtatt ctgaatggaa ctgtgttgct ggacatgcat
661 gccaacactt tagaagaaat tgcagatatg gttcttgacc aacaagtgag ctcaggtcag
721 ctgaatgaag atgtacgcca tagggtccat gaggcattga tgaaacagca tcatcatcag
781 aatcagaaaa aactcaccaa caggattccc attgttcgtt cctttgctga tattggcaag
841 aaacagtcag aaccaaattc catggacaaa aatgcaggtc aggttgtttc tcctcagtct
901 gctccagcct gtgttgaaaa taaaaatgat gttagcagag aaaacagcac tgttgacttt
961 agcaaggttg atctgcattt tatgaaaaag attcctccag gtgctgaagc atcgaacatc
1021 ttagtgggag aactggagtt cttggatcga acagtagttg cgtttgtcag gttgtctcca
1081 gctgtattgc ttcaaggact ggctgaagtc ccaatcccaa ccagattttt gttcattctt
1141 ctgggacccc tgggaaaggg tcaacagtac catgagattg gcagatcaat tgcaacccta
1201 atgacagatg aggtatttca tgatgttgcc tataaagcta aagatcgtaa tgacttggta
1261 tcaggaattg atgagtttct ggatcaggtt actgttctcc ctcctggaga atgggatcca
1321 agcattcgaa tagagcctcc caaaaatgtt ccttcccagg agaagaggaa gattcctgct
1381 gtaccaaatg gaacagcagc tcatggggaa gcagagcccc acggaggaca tagtggacct
1441 gaactccagc gaactggaag gatttttggg ggacttattt tagatatcaa aagaaaagct
1501 ccatacttct ggagtgactt cagagatgct ttcagcctgc agtgcttagc atcttttcta
1561 tttctctact gcgcgtgtat gtctcctgtc atcacgtttg gaggactgct gggagaagca
1621 actgaagggc gtataagtgc aattgaatct ctctttggag catccatgac cgggatagcc
1681 tattctctct ttggtggaca gcctcttacc atattaggca gtacaggacc agttttggtg
1741 tttgaaaaga ttttgtttaa attttgcaaa gaatatgggc tgtcatacct atctttaaga
1801 gctagcattg gactttggac tgcaactcta tgtatcatac ttgtggccac agatgctagt
1861 tcccttgtct gctacatcac tcggtttact gaagaagctt ttgcttccct gatttgcatc
1921 attttcattt atgaggccct ggagaagttg tttgaactca gtgaagcata tccaatcaac
1981 atgcataatg atctggaact gctgacacaa tactcgtgta actgtgtgga accgcataat
2041 cccggcaatg gcacattgaa ggaatggagg gaatccaata tttctgcctc tgacataatt
2101 tgggagaacc taactgtgtc agaatgcaaa tcattgcatg gagagtatgt tggacgggcc
2161 tgtggccatg atcacccata tgttccagat gttctatttt ggtctgtgat cctgttcttt
2221 tccacagtta ctctgtcagc caccctgaag cagttcaaga ctagcagata ttttccaacc
2281 aaggttcgat ccatagtgag tgactttgct gtctttctta caattccgtg tatggtttta
2341 attgactatg ccattgggat cccatctcca aaactacaag taccaagtgt tttcaagccc
2401 actagagatg atcgtggctg gtttgttacg cctttaggtc caaacccatg gtggacagta
2461 atagctgcta taattccagc tctgctttgt actattctaa tttttatgga ccaacagatt
2521 acagctgtca tcatcaacag gaaagagcat aagctaaaga aaggttgtgg gtaccatctg
2581 gacctattaa tggtggctgt catgctcggt gtatgctcca tcatgggcct gccatggttt
2641 gtggctgcca cagtcctctc catcactcat gtcaatagcc taaaactgga atcagaatgc
2701 tcagctcagg agaacaaccc aaatttctcg gcattcggga gcaaagggtt actgggctta
2761 tgatttttat tcttatgggt tcatcagtct ttatgaccag tattctgaag tttattccca
2821 tgccagtgct atatggagtg tttctttata tgggtgcttc atctctaaag ggaattcagt
2881 tctttgatag gataaagctc ttctggatgc cggcaaaaca tcaaccagat tttatatacc
2941 taaggcacgt accgcttcga aaagtgcatc tcttcacaat tattcagatg agttgccttg
3001 gcctttgtgg ataataaaag tttcaagagc tgctattgtc tttcccatga tggtgttagc
3061 cctggtattt gtaagaaagt tgatggactt gttgttcacg aagcgggaac tcagctggtt
3121 ggatgatttg atgcccgaga gtaagaaaaa gaaactggaa gatgctgaaa aagaagaaga
3181 acaaagtatg ctagctatgg aagatgaggg cacagtacaa ctcccattgg aagggcacta
3241 tagagatgat ccatctgtga tcaatatatc tgatgaaatg tcaaagactg ccttgtggag
3301 gaaccttctg attactgccg ataactcaaa agataaggag tcaagctttc cttccaaaag
3361 ctccccttcc taatcactct agaagctgat tccccaaagc attgaaagcc gaaaagagaa
3421 gaaagctgac tcagggaaag gtgttgacag ggagacttgt ctatgactcg atcttcaatt
3481 tattttttac atatatatga gaagagtgtc acaattatta ataaaactgc tttgatcatg
3541 tattgtaaat tctgtccctc aacccaaatc caccttcata ctgtaagtag tgcaatactt
3601 gtttcatttc tgtgtttaaa cttctgagca gtgagacatc cctgtgagca gatacaatag
3661 ccaatgcaag aatctgtgtg ttccttgctg tacgttagac atttgtaaac tggattctga
3721 ttgtcagttt tatgagagca atagcttcct taaagagata agtcatattt acctagtttg
3781 tattttcata ctttagtgac ctgaagatgc ctgataattt cattcagaag aatttttgaa
3841 aggtagtctt acttcttttt agtttttata gcttagcatt agtgacttat ttcaaaagac
3901 ccaaatcaaa aagttagttt gaaagcattt tttaataatt gtatttatgc atttccttga
3961 tttaatatga taaatttaat acttaacaat ttatatgtaa ctaaaactta aagtcatttg
4021 aaaaatatat agaaacctat ttacaacttg ttaaggacaa tcagacataa tgcagagtta
4081 agtagtattt gcttaaaatt caagttgtga ctaatgatca aatactaggc ttgtacgaaa
4141 tgctttagaa aaactttgta acagttttgt gggatttttc aatataaacc tttatcagaa
4201 atatactaag tttgtctccc actgacaaca gatgttttcc aaataaacat attctataca
4261 tacttgtgga atgccacatg gtgaatcatt gtatatgaaa ttccactcct gtacagttac
4321 tctgcagcta atggtcatgc actgcttaat gctggtcctg aatcatgttc tcatgttaga
4381 ccaacagctc tccaattgtc attttttttc tgcagagttt tttttttcca cttttaaatt
4441 aaatgcatgt tgtggaaaaa cagtctttta aaatgaaatt tcagattcca tttgagaagg
4501 ttctgtagat atttcagtcc atataaaata atacatcttt actaaactta tataagggga
4561 gagaaagtta tgaagttttg gacattacta aaagtacagt atttgatttc actttcaatg
4621 aatgtgaagt taataaaact aaatctcata atgctcttgg ttcctaagaa tgagtagtaa
4681 tcatcaactt tataatactc caatattccg ctttataata attcagagcc ctgtggcttt
4741 tacacaccgt taattatgta ctctgttgga agtgcacatg aaaagtgaag aaaagttcct
4801 cttgtgatta aactaatggg aggaaataaa tcaacaaagt ctccattaag ttctacattt
4861 tgagaccttt taaaaattcc cctcacaatt ctttaaggag cccccctttt tatggaacat
4921 gagcctaaaa attatagaaa gaagaatttt aagttaataa agtttgtatt tataaatgct
4981 gaaaaaatac agaaactttc tgttccaaat gtgttgcctt tgtgtatttt ataatacaga
5041 tactacattg taaacatttc cattgtttta tgatttagcc agtgattccc caaagcagcc
5101 tcttagtgtt ttaatatatt aataactgtt ttgttaaaaa tgatcatagt gaatttaaat
5161 cttcacatga tcacctattt gaataagcaa tcatatccaa tgaaattctg tatttctgag
5221 tatttttata gtcattttgt tcttgtgtga attttaaagc tatccctatg ttaatcctaa
5281 tattttgaaa tcatataaaa tataataaaa atgtagtatt atatatttac ttctaatttc
5341 agattcctgg tcaaaattac taaatatctt gaatgtaatt tagtgccaag tttaaataat
5401 gtgtaaatgt gactaggata ttgtgttttt cacaattaag aaatgttatg tggaaataaa
5461 tatttatcct aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aagaaaaaaa
5521 aaaaaaaaa
//