LOCUS BC038237 4042 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens integrin, alpha X (complement component 3 receptor 4
subunit), mRNA (cDNA clone MGC:46124 IMAGE:5745308), complete cds.
ACCESSION BC038237
VERSION BC038237.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4042)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4042)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34452172.
FEATURES Location/Qualifiers
source 1..4042
/db_xref="H-InvDB:HIT000052009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46124 IMAGE:5745308"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4042
/gene="ITGAX"
/db_xref="GeneID:3687"
/db_xref="HGNC:HGNC:6152"
/db_xref="MIM:151510"
CDS 34..3543
/gene="ITGAX"
/codon_start=1
/product="ITGAX protein"
/protein_id="AAH38237.1"
/db_xref="GeneID:3687"
/db_xref="HGNC:HGNC:6152"
/db_xref="MIM:151510"
/translation="MTRTRAALLLFTALATSLGFNLDTEELTAFRVDSAGFGDSVVQY
ANSWVVVGAPQKITAANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSP
SQLLACGPTVHHECGRNMYLTGLCFLLGPTQLTQRLPVSRQECPRQEQDIVFLIDGSG
SISSRNFATMMNFVRAVISQFQRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLAS
VHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMA
DAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIF
AIEGTETTSSSSFELEMAQEGFSAVFTPDGPVLGAVGSFTWSGGAFLYPPNMSPTFIN
MSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVT
GTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDA
VLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEKENRGAVYLFHGVLGPSISP
SHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRTRPVLWVGVS
MQFIPAEIPRSAFECREQVVSEQTLVQSNICLYIDKRSKNLLGSRDLQSSVTLDLALD
PGRLSPRATFQETKNRSLSRVRVLGLKAHCENFNLLLPSCVEDSVTPITLRLNFTLVG
KPLLAFRNLRPMLAADAQRYFTASLPFEKNCGADHICQDNLGISFSFPGLKSLLVGSN
LELNAEVMVWNDGEDSYGTTVTFSHPAGLSYRYVAEGQKQGQLRSLHLTCDSAPVGSQ
GTWSTSCRINHLIFRGGAQITFLATFDVSPKAVLGDRLLLTANVSSENNTPRTSKTTF
QLELPVKYAVYTVVSSHEQFTKYLNFSESEEKESHVAMHRYQVNNLGQRDLPVSINFW
VPVELNQEAVWMDVEVSHPQNPSLRCSSEKIAPPASDFLAHIQKNPVLDCSIAGCLRF
RCDVPSFSVQEELDFTLKGNLSFGWVRQILQKKVSVVSVAEITFDTSVYSQLPGQEAF
MRAQTTTVLEKYKVHNPTPLIVGSSIGGLLLLALITAVLYKVGFFKRQYKEMMEEANG
QIAPENGTQTPSPPTPHYPQDNV"
BASE COUNT 925 a 1176 c 1111 g 830 t
ORIGIN
1 ggagctcaga gctccacatc tgaccttcta gtcatgacca ggaccagggc agcactcctc
61 ctgttcacag ccttagcaac ttctctaggt ttcaacttgg acacagagga gctgacagcc
121 ttccgtgtgg acagcgctgg gtttggagac agcgtggtcc agtatgccaa ctcctgggtg
181 gtggttggag ccccccaaaa gataacagct gccaaccaaa cgggtggcct ctaccagtgt
241 ggctacagca ctggtgcctg tgagcccatc ggcctgcagg tgcccccgga ggccgtgaac
301 atgtccctgg gcctgtccct ggcgtctacc accagccctt cccagctgct ggcctgcggc
361 cccaccgtgc accacgagtg cgggaggaac atgtacctca ccggactctg cttcctcctg
421 ggccccaccc agctcaccca gaggctcccg gtgtccaggc aggagtgccc aagacaggag
481 caggacattg tgttcctgat cgatggctca ggcagcatct cctcccgcaa ctttgccacg
541 atgatgaact tcgtgagagc tgtgataagc cagttccaga gacccagcac ccagttttcc
601 ctgatgcagt tctccaacaa attccaaaca cacttcactt tcgaggaatt caggcgcagc
661 tcaaaccccc tcagcctgtt ggcttctgtt caccagctgc aagggtttac atacacggcc
721 accgccatcc aaaatgtcgt gcaccgattg ttccatgcct catatggggc ccgtagggat
781 gccgccaaaa ttctcattgt catcactgat gggaagaaag aaggcgacag cctggattat
841 aaggatgtca tccccatggc tgatgcagca ggcatcatcc gctatgcaat tggggttgga
901 ttagcttttc aaaacagaaa ttcttggaaa gaattaaatg acattgcatc gaagccctcc
961 caggaacaca tatttaaagt ggaggacttt gatgctctga aagatattca aaaccaactg
1021 aaggagaaga tctttgccat tgagggtacg gagaccacaa gcagtagctc cttcgaattg
1081 gagatggcac aggagggctt cagcgctgtg ttcacacctg atggccccgt tctgggggct
1141 gtggggagct tcacctggtc tggaggtgcc ttcctgtacc ccccaaatat gagccctacc
1201 ttcatcaaca tgtctcagga gaatgtggac atgagggact cttacctggg ttactccacc
1261 gagctggccc tctggaaagg ggtgcagagc ctggtcctgg gggccccccg ctaccagcac
1321 accgggaagg ctgtcatctt cacccaggtg tccaggcaat ggaggatgaa ggccgaagtc
1381 acggggactc agatcggctc ctacttcggg gcctccctct gctccgtgga cgtagacagc
1441 gacggcagca ccgacctggt cctcatcggg gccccccatt actacgagca gacccgaggg
1501 ggccaggtgt ctgtgtgtcc cttgcccagg gggtggagaa ggtggtggtg tgatgctgtt
1561 ctctacgggg agcagggcca cccctggggt cgctttgggg cggctctgac agtgctgggg
1621 gatgtgaatg gggacaagct gacagacgtg gtcatcgggg ccccaggaga gaaggagaac
1681 cggggtgctg tctacctgtt tcacggagtc ttgggaccca gcatcagccc ctcccacagc
1741 cagcggatcg cgggctccca gctctcctcc aggctgcagt attttgggca ggcactgagc
1801 gggggtcaag acctcaccca ggatggactg gtggacctgg ctgtgggggc ccggggccag
1861 gtgctcctgc tcaggaccag acctgtgctc tgggtggggg tgagcatgca gttcatacct
1921 gccgagatcc ccaggtctgc gtttgagtgt cgggagcagg tggtctctga gcagaccctg
1981 gtacagtcca acatctgcct ttacattgac aaacgttcta agaacctgct tgggagccgt
2041 gacctccaaa gctctgtgac cttggacctg gccctcgacc ctggccgcct gagtccccgt
2101 gccaccttcc aggaaacaaa gaaccggagt ctgagccgag tccgagtcct cgggctgaag
2161 gcacactgtg aaaacttcaa cctgctgctc ccgagctgcg tggaggactc tgtgaccccc
2221 attaccttgc gtctgaactt cacgctggtg ggcaagcccc tccttgcctt cagaaacctg
2281 cggcctatgc tggccgccga tgctcagaga tacttcacgg cctccctacc ctttgagaag
2341 aactgtggag ccgaccatat ctgccaggac aatctcggca tctccttcag cttcccaggc
2401 ttgaagtccc tgctggtggg gagtaacctg gagctgaacg cagaagtgat ggtgtggaat
2461 gacggggaag actcctacgg aaccaccgtc accttctccc accccgcagg actgtcctac
2521 cgctacgtgg cagagggcca gaaacaaggg cagctgcgtt ccctgcacct gacatgtgac
2581 agcgccccag ttgggagcca gggcacctgg agcaccagct gcagaatcaa ccacctcatc
2641 ttccgtggcg gcgcccagat caccttcttg gctacctttg acgtctcccc caaggctgtc
2701 ctgggagacc ggctgcttct gacagccaat gtgagcagtg agaacaacac tcccaggacc
2761 agcaagacca ccttccagct ggagctcccg gtgaagtatg ctgtctacac tgtggttagc
2821 agccacgaac aattcaccaa atacctcaac ttctcagagt ctgaggagaa ggaaagccat
2881 gtggccatgc acagatacca ggtcaataac ctgggacaga gggacctgcc tgtcagcatc
2941 aacttctggg tgcctgtgga gctgaaccag gaggctgtgt ggatggatgt ggaggtctcc
3001 cacccccaga acccatccct tcggtgctcc tcagagaaaa tcgcaccccc agcatctgac
3061 ttcctggcgc acattcagaa gaatcccgtg ctggactgct ccattgctgg ctgcctgcgg
3121 ttccgctgtg acgtcccctc cttcagcgtc caggaggagc tggatttcac cctgaagggc
3181 aacctcagct ttggctgggt ccgccagata ttgcagaaga aggtgtcggt cgtgagtgtg
3241 gctgaaatta cgttcgacac atccgtgtac tcccagcttc caggacagga ggcatttatg
3301 agagctcaga cgacaacggt gctggagaag tacaaggtcc acaaccccac ccccctcatc
3361 gtaggcagct ccattggggg tctgttgctg ctggcactca tcacagcggt actgtacaaa
3421 gttggcttct tcaagcgtca gtacaaggaa atgatggagg aggcaaatgg acaaattgcc
3481 ccagaaaacg ggacacagac ccccagcccg cccactcccc attaccctca ggacaatgtc
3541 tgaactctcc agcttcgcgt gagaagtccc cttccatccc agagggtggg cttcagggcg
3601 cacagcatga gaggctctgt gcccccatca ccctcgtttc cagtgaatta gtgtcatgtc
3661 agcatcagct cagggcttca tcgtggggct ctcagttccg atttcccagg ctgaattggg
3721 agtgagatgc ctgcatgctg ggttctgcac agctggcctc ccgcgttggg caacattgct
3781 ggctggaagg gaggagcgcc ctctagggag ggacatggcc ccggtgcggc tgcagctcac
3841 ccagccccag gggcagaaga gacccaacca cttctatttt ttgaggctat gaatatagta
3901 cctggaaaaa tgccaagaca tgattatttt tttaaaaagc gtactttaaa tgtttgtgtt
3961 aataaattaa aacatgcaca aaaagatgca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4021 aaaaaaaaaa aaaaaaaaaa aa
//