LOCUS BC038236 3611 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens phosphatidylinositol glycan anchor biosynthesis, class
A, mRNA (cDNA clone MGC:46038 IMAGE:5733899), complete cds.
ACCESSION BC038236
VERSION BC038236.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3611)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3611)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: j Column: 20.
FEATURES Location/Qualifiers
source 1..3611
/db_xref="H-InvDB:HIT000052008"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46038 IMAGE:5733899"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3611
/gene="PIGA"
/gene_synonym="GPI3"
/gene_synonym="PIG-A"
/db_xref="GeneID:5277"
/db_xref="HGNC:HGNC:8957"
/db_xref="MIM:311770"
CDS 74..1528
/gene="PIGA"
/gene_synonym="GPI3"
/gene_synonym="PIG-A"
/codon_start=1
/product="phosphatidylinositol glycan anchor biosynthesis,
class A"
/protein_id="AAH38236.1"
/db_xref="GeneID:5277"
/db_xref="HGNC:HGNC:8957"
/db_xref="MIM:311770"
/translation="MACRGGAGNGHRASATLSRVSPGSLYTCRTRTHNICMVSDFFYP
NMGGVESHIYQLSQCLIERGHKVIIVTHAYGNRKGIRYLTSGLKVYYLPLKVMYNQST
ATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAHDALFHAKTMGLQTVFTDHSLFGFA
DVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPD
PFRRHDSITIVVVSRLVYRKGIDLLSGIIPELCQKYPDLNFIIGGEGPKRIILEEVRE
RYQLHDRVRLLGALEHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTRVG
GIPEVLPENLIILCEPSVKSLCEGLEKAIFQLKSGTLPAPENIHNIVKTFYTWRNVAE
RTEKVYDRVSVEAVLPMDKRLDRLISHCGPVTGYIFALLAVFNFLFLIFLRWMTPDSI
IDVAIDATGPRGAWTNNYSHSKRGGENNEISETR"
BASE COUNT 1088 a 645 c 706 g 1172 t
ORIGIN
1 ggaactcacc ggtaatagag gacacatctc ttaactgggt tgctctaaga actgatgtct
61 aaaccgtctc agcatggcct gtagaggagg agctgggaat ggccaccgtg cctcagctac
121 actctctcgg gttagccctg gaagtcttta cacatgtaga acccgtaccc ataatatatg
181 catggtatct gactttttct acccaaatat gggaggcgtg gaaagccaca tttaccagct
241 ctctcagtgc ctgattgaaa gagggcataa ggttataatt gtcacccatg cttatggaaa
301 tcgaaaaggc atccgttacc tcaccagtgg cctcaaagtc tattacttgc ctctgaaagt
361 catgtacaac cagtctacag ccacgaccct ctttcacagt ctgccattgc tcaggtacat
421 atttgttcgg gagagagtca cgataatcca ttcacatagt tctttttctg ctatggccca
481 tgatgctctc ttccacgcca agacaatggg gcttcagaca gtcttcacgg accattccct
541 ttttggattt gctgatgtca gctcggtgct tacaaacaag cttctaaccg tgtctctttg
601 tgatacaaac cacatcattt gtgtgtctta tactagtaag gaaaatactg tactaagagc
661 agcactgaat cctgaaatag tgtccgtcat tcctaatgct gtagatccta ctgacttcac
721 tccagaccca tttagaaggc atgatagtat aactattgtt gttgtcagca gacttgttta
781 cagaaaaggg atcgatttgc ttagtggtat aatacctgaa ctctgtcaga aatatccaga
841 tttaaatttc ataattggag gagagggacc aaagagaatc attttggaag aagttcggga
901 aagataccag ctgcatgaca gggtgcgtct tttgggagct ttagaacaca aggatgttag
961 aaatgtctta gttcaaggac atatttttct gaatacctcc cttactgaag cattctgcat
1021 ggcgatcgtg gaagcagcca gttgtggttt acaggttgta agtaccagag ttggtggaat
1081 tcctgaggtg cttccagaaa accttattat tttatgtgag ccttcagtaa aatctttgtg
1141 tgaaggattg gaaaaggcta ttttccaact gaagtcaggg acattgccag ctccagaaaa
1201 catccataac atagtaaaga ctttctacac ctggaggaat gttgcagaaa gaactgaaaa
1261 ggtatatgac cgggtatcag tggaagctgt gttgccaatg gacaaacgac tggacagact
1321 tatttctcac tgcggcccag taacaggcta catctttgct ttgttggcag ttttcaactt
1381 cctcttcctc attttcttga gatggatgac tccagattct atcattgatg ttgcaataga
1441 tgccactggg ccacggggtg cctggactaa taactattct cacagtaaaa gagggggtga
1501 gaataatgag atatctgaaa ccaggtagaa ggaagcctag attgtaagat tttaaacatt
1561 tgtaatagtt ctataaagac tatggaaaat aaccttgctt ttggggggtt tttgtttttt
1621 tagagttaat ttagtaagtt atgctacctc tatatcattc aatattttct gttgaggaaa
1681 gataaaaatg tatgcaattc ctgagtgtag aaacttcttg cacttattta aaatttagga
1741 gagaacattt aagccactca ggtatgcaat ttttcagact actgaaatcc ctgtagcaga
1801 gatgttttaa cattatattt tgagagcttt gggtgctgaa gggccaaacg ttttctgggc
1861 attttttggc cagtttttaa tgtaacacca ttagacactc accagatgtt tacaagtttt
1921 ctttagggga actacaacaa ttatatgaac tgttttatat catgttcata tacatttatt
1981 aggaatctaa atcatgtctt tgaacattta ttaggttcac tcagtaggtg ttacatgtaa
2041 ttaacaggtt ccttgagtaa gatagtccat cagttaccag cacattttga acccctgctc
2101 tgtgtagaat gttgaactag atgcttcccg ccattaagga ccaggggtgc attcactctt
2161 tgtttaccat tcaaatggct tacttcatca taattgtggt tgatatgaga tcaatatcca
2221 acatgccaaa aatgctcatg ccagttaatg ccaggaaaaa aatcaccgac acactactag
2281 tactttgttc ctgttgtatg cattctccta ggtagagcct ccatcttcag ttgtgtttgt
2341 gaaggtattt tttgcttttt aaatactggg gaccgatatc actgttgata gtgcagagaa
2401 accctccaca tttttcagtg cataattgag ttttctataa atgccttcgt gttttctgag
2461 cagaatgtac gaggtgtgcc atcccaaaac cagctgctac cctgtccttt taatgtaagt
2521 cactcccctt cactgtggcc tcgctgatgt ctgataagta ttgtcagtgt gcaaaaggct
2581 ttacttcaga atggtttatt tatagcaaac taagttgaaa attttagaaa cagtctttgt
2641 gggtggatgt tattaactgt cattgttgtt gcccagagcc atgggttttt taaccccaaa
2701 ttatccacat ggtgtgtatt atgaattctt tgaactctta aggtttttgt gagaaaagga
2761 ctgtgaattc aaaacaataa ggcacttgtg ggtgcactac atagattctg acagtgttgt
2821 gattctgtat aggattttta aaaatgacaa cattcacaaa atttattact ttttaaaaaa
2881 taacatgcct attaactggt tgcactgata taaaagaaat atatttgtgt tttgtttgta
2941 ctaaaatgca aaagcaagag tgcaattttt aaaatctaga agttaggggt tttgttggag
3001 aaaaatggac tgatctttaa actattcagt cttactggga tttttatgca tagaaactca
3061 catataaaca tgaaataaac agtgccagta ttcataggaa agtgagaaac tgtaatattt
3121 ggccattatt ctattcaaca ggttttagag gcacgccacc attttttcct tatatttttg
3181 cttaattttt ttaaattgtc atttaattct taaactgtca tttatttgag atggaaataa
3241 gatctaaagt tagttgcctt tgcctgtaaa acaagtgatt tgcaaattat tatttttctt
3301 ttttttaaca aatggaagta aatttgtttc acgtaaatct taattttcaa cctttctgga
3361 taccttaatt gtaactgtca gtttgcactg gtcggtatat ggaaacacat tgctctaccc
3421 tgctacttag ttgattttaa agtgaattta cagtgatgag aaatttgtga aaaatatatt
3481 gtatttcttt tgatgtttca aaaggttgcc tatgaaaaac tgatttgtta aaacatgcta
3541 cgtgtccaaa aataaagacc agaatgacat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa a
//