LOCUS BC038227 6618 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens adenosine deaminase, RNA-specific, mRNA (cDNA clone MGC:45112 IMAGE:5497548), complete cds. ACCESSION BC038227 VERSION BC038227.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6618) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 6618) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 69 Row: f Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 70166851. FEATURES Location/Qualifiers source 1..6618 /db_xref="H-InvDB:HIT000052003" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:45112 IMAGE:5497548" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_85" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..6618 /gene="ADAR" /gene_synonym="ADAR1" /gene_synonym="DRADA" /gene_synonym="DSH" /gene_synonym="DSRAD" /gene_synonym="K88dsRBP" /gene_synonym="p136" /db_xref="GeneID:103" /db_xref="HGNC:HGNC:225" /db_xref="MIM:601059" CDS 170..3850 /gene="ADAR" /gene_synonym="ADAR1" /gene_synonym="DRADA" /gene_synonym="DSH" /gene_synonym="DSRAD" /gene_synonym="K88dsRBP" /gene_synonym="p136" /codon_start=1 /product="adenosine deaminase, RNA-specific" /protein_id="AAH38227.1" /db_xref="GeneID:103" /db_xref="HGNC:HGNC:225" /db_xref="MIM:601059" /translation="MNPRQGYSLSGYYTHPFQGYEHRQLRYQQPGPGSSPSSFLLKQI EFLKGQLPEAPVIGKQTPSLPPSLPGLRPRFPVLLASSTRGRQVDIRGVPRGVHLGSQ GLQRGFQHPSPRGRSLPQRGVDCLSSHFQELSIYQDQEQRILKFLEELGEGKATTAHD LSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIAVSTQAWNQHSGVVRPDGHSQ GAPNSDPSLEPEDRNSTSVSEDLLEPFIAVSAQAWNQHSGVVRPDSHSQGSPNSDPGL EPEDSNSTSALEDPLEFLDMAEIKEKICDYLFNVSDSSALNLAKNIGLTKARDINAVL IDMERQGDVYRQGTTPPIWHLTDKKRERMQIKRNTNSVPETAPAAIPETKRNAEFLTC NIPTSNASNNMVTTEKVENGQEPVIKLENRQEARPEPARLKPPVHYNGPSKAGYVDFE NGQWATDDIPDDLNSIRAAPGEFRAIMEMPSFYSHGLPRCSPYKKLTECQLKNPISGL LEYAQFASQTCEFNMIEQSGPPHEPRFKFQVVINGREFPPAEAGSKKVAKQDAAMKAM TILLEEAKAKDSGKSEESSHYSTEKESEKTAESQTPTPSATSFFSGKSPVTTLLECMH KLGNSCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSVSAPSKKVAKQMAAEEAMKALHG EATNSMASDNQPEGMISESLDNLESMMPNKVRKIGELVRYLNTNPVGGLLEYARSHGF AAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEK AERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHRCFNTLT NSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEII SRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTVSFHLYISTAPCGDGALF DKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGER LRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGYLFSQGHLTRAICCRVTRDG SAFEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDLEILDGTRGTV DGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLRLSYGEAKKAARDYETAKNYFKKGLK DMGYGNWISKPQEEKNFYLCPV" BASE COUNT 1736 a 1679 c 1625 g 1578 t ORIGIN 1 ccacgcgtcc gggcgcgcag acccgcggag tttcccgtgc cgacgccccg gggccacttc 61 cagtgcggag tagcggaggc gtgggggcct cgaggggctg gcgcggccca gcggtcgggc 121 cagggtcgtg ccgccggcgg gtcgggccgg gcaatgcctc gcgggcgcaa tgaatccgcg 181 gcaggggtat tccctcagcg gatactacac ccatccattt caaggctatg agcacagaca 241 gctcagatac cagcagcctg ggccaggatc ttcccccagt agtttcctgc ttaagcaaat 301 agaatttctc aaggggcagc tcccagaagc accggtgatt ggaaagcaga caccgtcact 361 gccaccttcc ctcccaggac tccggccaag gtttccagta ctacttgcct ccagtaccag 421 aggcaggcaa gtggacatca ggggtgtccc caggggcgtg catctcggaa gtcaggggct 481 ccagagaggg ttccagcatc cttcaccacg tggcaggagt ctgccacaga gaggtgttga 541 ttgcctttcc tcacatttcc aggaactgag tatctaccaa gatcaggaac aaaggatctt 601 aaagttcctg gaagagcttg gggaagggaa ggccaccaca gcacatgatc tgtctgggaa 661 acttgggact ccgaagaaag aaatcaatcg agttttatac tccctggcaa agaagggcaa 721 gctacagaaa gaggcaggaa cacccccttt gtggaaaatc gcggtctcca ctcaggcttg 781 gaaccagcac agcggagtgg taagaccaga cggtcatagc caaggagccc caaactcaga 841 cccgagtttg gaaccggaag acagaaactc cacatctgtc tcagaagatc ttcttgagcc 901 ttttattgca gtctcagctc aggcttggaa ccagcacagc ggagtggtaa gaccagacag 961 tcatagccaa ggatccccaa actcagaccc aggtttggaa cctgaagaca gcaactccac 1021 atctgccttg gaagatcctc ttgagttttt agacatggcc gagatcaagg agaaaatctg 1081 cgactatctc ttcaatgtgt ctgactcctc tgccctgaat ttggctaaaa atattggcct 1141 taccaaggcc cgagatataa atgctgtgct aattgacatg gaaaggcagg gggatgtcta 1201 tagacaaggg acaacccctc ccatatggca tttgacagac aagaagcgag agaggatgca 1261 aatcaagaga aatacgaaca gtgttcctga aaccgctcca gctgcaatcc ctgagaccaa 1321 aagaaacgca gagttcctca cctgtaatat acccacatca aatgcctcaa ataacatggt 1381 aaccacagaa aaagtggaga atgggcagga acctgtcata aagttagaaa acaggcaaga 1441 ggccagacca gaaccagcaa gactgaaacc acctgttcat tacaatggcc cctcaaaagc 1501 agggtatgtt gactttgaaa atggccagtg ggccacagat gacatcccag atgacttgaa 1561 tagtatccgc gcagcaccag gtgagtttcg agccatcatg gagatgccct ccttctacag 1621 tcatggcttg ccacggtgtt caccctacaa gaaactgaca gagtgccagc tgaagaaccc 1681 catcagcggg ctgttagaat atgcccagtt cgctagtcaa acctgtgagt tcaacatgat 1741 agagcagagt ggaccacccc atgaacctcg atttaaattc caggttgtca tcaatggccg 1801 agagtttccc ccagctgaag ctggaagcaa gaaagtggcc aagcaggatg cagctatgaa 1861 agccatgaca attctgctag aggaagccaa agccaaggac agtggaaaat cagaagaatc 1921 atcccactat tccacagaga aagaatcaga gaagactgca gagtcccaga cccccacccc 1981 ttcagccaca tccttctttt ctgggaagag ccccgtcacc acactgcttg agtgtatgca 2041 caaattgggg aactcctgcg aattccgtct cctgtccaaa gaaggccctg cccatgaacc 2101 caagttccaa tactgtgttg cagtgggagc ccaaactttc cccagtgtga gtgctcccag 2161 caagaaagtg gcaaagcaga tggccgcaga ggaagccatg aaggccctgc atggggaggc 2221 gaccaactcc atggcttctg ataaccagcc tgaaggtatg atctcagagt cacttgataa 2281 cttggaatcc atgatgccca acaaggtcag gaagattggc gagctcgtga gatacctgaa 2341 caccaaccct gtgggtggcc ttttggagta cgcccgctcc catggctttg ctgctgaatt 2401 caagttggtc gaccagtccg gacctcctca cgagcccaag ttcgtttacc aagcaaaagt 2461 tgggggtcgc tggttcccag ccgtctgcgc acacagcaag aagcaaggca agcaggaagc 2521 agcagatgcg gctctccgtg tcttgattgg ggagaacgag aaggcagaac gcatgggttt 2581 cacagaggta accccagtga caggggccag tctcagaaga actatgctcc tcctctcaag 2641 gtccccagaa gcacagccaa agacactccc tctcactggc agcaccttcc atgaccagat 2701 agccatgctg agccaccggt gcttcaacac tctgactaac agcttccagc cctccttgct 2761 cggccgcaag attctggccg ccatcattat gaaaaaagac tctgaggaca tgggtgtcgt 2821 cgtcagcttg ggaacaggga atcgctgtgt aaaaggagat tctctcagcc taaaaggaga 2881 aactgtcaat gactgccatg cagaaataat ctcccggaga ggcttcatca ggtttctcta 2941 cagtgagtta atgaaataca actcccagac tgcgaaggat agtatatttg aacctgctaa 3001 gggaggagaa aagctccaaa taaaaaagac tgtgtcattc catctgtata tcagcactgc 3061 tccgtgtgga gatggcgccc tctttgacaa gtcctgcagc gaccgtgcta tggaaagcac 3121 agaatcccgc cactaccctg tcttcgagaa tcccaaacaa ggaaagctcc gcaccaaggt 3181 ggagaacgga gaaggcacaa tccctgtgga atccagtgac attgtgccta cgtgggatgg 3241 cattcggctc ggggagagac tccgtaccat gtcctgtagt gacaaaatcc tacgctggaa 3301 cgtgctgggc ctgcaagggg cactgttgac ccacttcctg cagcccattt atctcaaatc 3361 tgtcacattg ggttaccttt tcagccaagg gcatctgacc cgtgctattt gctgtcgtgt 3421 gacaagagat gggagtgcat ttgaggatgg actacgacat ccctttattg tcaaccaccc 3481 caaggttggc agagtcagca tatatgattc caaaaggcaa tccgggaaga ctaaggagac 3541 aagcgtcaac tggtgtctgg ctgatggcta tgacctggag atcctggacg gtaccagagg 3601 cactgtggat gggccacgga atgaattgtc ccgggtctcc aaaaagaaca tttttcttct 3661 atttaagaag ctctgctcct tccgttaccg cagggatcta ctgagactct cctatggtga 3721 ggccaagaaa gctgcccgtg actacgagac ggccaagaac tacttcaaaa aaggcctgaa 3781 ggatatgggc tatgggaact ggattagcaa accccaggag gaaaagaact tttatctctg 3841 cccagtatag tatgctccag tgacagatgg attagggtgt gtcatactag ggtgtgagag 3901 aggtaggtcg tagcattcct catcacatgg tcaggggatt ttttttttct cctttttttt 3961 tctttttaag ccataattgg tgatactgaa aactttgggt tcccatttat cctgctttct 4021 ttgggattgc taggcaaggt ctggccaggc cccccttttt tcccccaagt gaagaggcag 4081 aaacctaaga agttatcttt tctttctacc caaagcatac atagtcactg agcacctgcg 4141 gtccatttcc tcttaaaagt tttgttttga tttgtttcca tttcctttcc ctttgtgttt 4201 gctacactga cctcttgcgg tcttgattag gtttcagtca actctggatc atgtcaggga 4261 ctgataattt catttgtgga ttacgcagac ccctctactt cccctctttc ccttctgaga 4321 ttctttcctt gtgatctgaa tgtctccttt tccccctcag agggcaaagg tgaacataaa 4381 ggatttggtg aaacatttgt aagggtagga gttgaaaact gcagttccca gtgccacgga 4441 agtgtgattg gagcctgcag ataatgccca gccatcctcc catcctgcac tttagccagc 4501 tgcagggcgg gcaaggcaag gaaagctgct tccctggaag tgtatcactt tctccggcag 4561 ctgggaagtc tagaaccagc cagactgggt taagggagct gctcaagcaa tagcagaggt 4621 ttcacccggc aggatgacac agaccacttc ccagggagca cgggcatgcc ttggaatatt 4681 gccaagcttc cagctgcctc ttctcctaaa gcattcctag gaatattttc cccgccaatg 4741 ctgggcgtac accctagcca acgggacaaa tcctagaggg tataaaatca tatctgctca 4801 gataatcatg acttagcaag aataagggca aaaaatcctg ttggcttaac gtcactgttc 4861 cacccggtgt aatatctctc atgacagtga caccaaggga agttgactaa gtcacatgta 4921 aattaggagt gttttaaaga atgccataga tgttgattct taactgctac agataacctg 4981 taattgagca gatttaaaat tcaggcatac ttttccattt atccaagtgc tttcattttt 5041 ccagatggct tcagaagtag gctcgtgggc agggcgcaga cctgatcttt ctagggttga 5101 catagaaagc agtagttgtg ggtgaaaggg caggttgtct tcaaactctg tgaggtagaa 5161 tcctttgtct atacctccat gaacattgac tcgtgtgttc agagcctttg gcctctctgt 5221 ggagtctggc tctctggctc ctgtgcattc cttgaatagt cactcgtaaa aactgtcagt 5281 gcttgaaact gtttccttta ctcatgttga agggactttg ttggctttta gagtgttggt 5341 catgactcca agagcagagc agggaagagc ccaagcatag acttggtgcc gtggtgatgg 5401 ctgcagtcca gttttgtgat gctgctttta cgtgtccctc gataacagtc agctagacac 5461 actcaggagg actactgagg ctctgcgacc ttcaggagct gagcctgcct ctctccttta 5521 gatgacagac cttcatctgg gaacgtgctg agccagcacc ctcagatgat ttccctccaa 5581 actgctgact aggtcatcct ctgtctggta gagacattca catctttgct tttattctat 5641 gctctctgta cttttgacca aaaattgacc aaagtaagaa aatgcaagtt ctaaaaatag 5701 actaaggatg cctttgcaga acaccaaagc atcccaagga actggtaggg aagtggcgcc 5761 tgtctcctgg agtggaagag gcctgctccc tggctctggg tctgctgggg gcacagtaaa 5821 tcagtcttgg cacccacatc cagggcagag aggtctgtgg ttctcagcat cagaaggcag 5881 cgcagcccct ctcctcttca ggctacaggg ttgtcacctg ctgagtcctc aggttgtttg 5941 gcctctctgg tccatcttgg gcattaggtt ctccagcaga gctctggcca gctgcctctt 6001 ctttaactgg gaacacaggc tctcacaaga tcagaacccc cactcacccc caagatctta 6061 tctagcaagc ctgtagtatt cagtttctgt tgtaggaaga gagcgaggca tccctgaatt 6121 ccacgcatct gctggaaacg agccgtgtca gatcgcacat ccctgcgccc ccatgccccc 6181 atgcccctct gagtcacaca ggacagagga ggcagagctt ctgcccactg ttatcttcac 6241 tttctttgtc cagtcttttg tttttaataa gcagtgaccc tccctactct tctttttaat 6301 gatttttgta gttgatttgt ctgaactgtg gctactgtgc attccttgaa taatcacttg 6361 taaaaattgt cagtgcttga agctgtttcc tttactcaca ttgaagggac ttcgttggtt 6421 ttttggagtc ttggttgtga ctccaagagc agagtgagga agacccccaa gcatagactc 6481 gggtactgtg atgatggctg cagtccagtt ttatgattct gcttttatgt gtcccttgat 6541 aacagtgact taacaatata cattcctcat aaataaaaaa aaaacaagaa tctgaaaaaa 6601 aaaaaaaaaa aaaaaaaa //