LOCUS BC038191 989 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens chromosome 9 open reading frame 142, mRNA (cDNA clone IMAGE:3873974), partial cds. ACCESSION BC038191 VERSION BC038191.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 989) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 989) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 87 Row: b Column: 23. FEATURES Location/Qualifiers source 1..989 /db_xref="H-InvDB:HIT000095113" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3873974" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..989 /gene="C9orf142" /db_xref="GeneID:286257" /db_xref="HGNC:HGNC:27849" CDS <1..274 /gene="C9orf142" /codon_start=2 /product="C9orf142 protein" /protein_id="AAH38191.1" /db_xref="GeneID:286257" /db_xref="HGNC:HGNC:27849" /translation="PPRFVCYCEGEESGEGDRGGFNLYVTDAAELWSTCFTPDSLAAL VGNWAGLGAATPLLAVQIVYGATDIWDSPEGSDTLCPPCSCSPPIG" BASE COUNT 204 a 311 c 310 g 164 t ORIGIN 1 gccgccccgc ttcgtgtgct actgcgaagg ggaggaaagc ggggaggggg accgcggcgg 61 cttcaacctc tacgtgaccg acgccgcgga gctttggagc acctgcttca cgccggacag 121 cctggcggcc ctcgtgggta actgggcggg tctgggagcc gccacacccc tccttgcagt 181 gcagatcgtc tatggggcga cagacatctg ggattcccca gaaggctctg acaccctctg 241 cccgccctgt agctgtagtc ctcccattgg ctagggctct ggggtcgggc aggtttcggg 301 tgcccccagt gggcctcggg ttccaggcag ctcgtgacaa gcccctgtgc tctctagaaa 361 gcccgttttg gcctgagtgc ggctgaggac atcacccccc ggttcagggc agcctgtgag 421 cagcaagctg tggctctgac tctgcaggag gacagagcat ccctgacgct ttcagggggg 481 ccctcggcac tggcctttga cctctccaag gtaccaggcc cagaggcagc ccccaggctg 541 cgggcgctga cactgggcct ggcaaaacgc gtgtggagcc tggagcggcg actggcagct 601 gcagaagaga cagctgtcag cccgaggaag agcccccggc ctgcagggcc tcagctcttc 661 ttaccagacc cagatcccca gagaggtggc cctggacctg gagtcaggag gcggtgtcca 721 ggagagtcgc tcatcaaccc cgggttcaag agtaagaaac cagctggtgg cgtggacttc 781 gatgagacct gaaggtgcag cacaagcgtg gccccgcggg gagtccgcct atgaggggag 841 aggcagtctt tgaggccccc atcagagacc ccccgccacc acctccacct gcctgtcctg 901 ggccaggact aacacggctc ctcaaattcc ttccctgtca aataaacagc tcccttggaa 961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //