LOCUS       BC038102                5142 bp    mRNA    linear   HUM 17-JUL-2006
DEFINITION  Homo sapiens nischarin, mRNA (cDNA clone MGC:33070 IMAGE:5268247),
            complete cds.
ACCESSION   BC038102
VERSION     BC038102.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5142)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 5142)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-SEP-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Sep 16, 2003 this sequence version replaced BC038102.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
            cDNA Library Preparation: Michael J. Brownstein (NHGRI) &  Shiraki
            Toshiyuki and Piero Carninci (RIKEN)
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 47 Row: m Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 66472381.
FEATURES             Location/Qualifiers
     source          1..5142
                     /db_xref="H-InvDB:HIT000095097"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:33070 IMAGE:5268247"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_97"
                     /lab_host="DH10B"
                     /note="Vector: pBluescriptR"
     gene            1..5142
                     /gene="NISCH"
                     /gene_synonym="I-1"
                     /gene_synonym="IRAS"
                     /gene_synonym="KIAA0975"
                     /db_xref="GeneID:11188"
                     /db_xref="HGNC:HGNC:18006"
     CDS             39..4553
                     /gene="NISCH"
                     /gene_synonym="I-1"
                     /gene_synonym="IRAS"
                     /gene_synonym="KIAA0975"
                     /codon_start=1
                     /product="nischarin"
                     /protein_id="AAH38102.1"
                     /db_xref="GeneID:11188"
                     /db_xref="HGNC:HGNC:18006"
                     /translation="MATARTFGPEREAEPAKEARVVGSELVDTYTVYIIQVTDGSHEW
                     TVKHRYSDFHDLHEKLVAERKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQKLLAA
                     FPGVTPRVLAHFLHFHFYEINGITAALAEELFEKGEQLLGAGEVFAIGPLQLYAVTEQ
                     LQQGKPTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKS
                     LHQVEISHCDAKHIRGLVASKPTLATLSVRFSATSMKEVLVPEASEFDEWEPEGTTLE
                     GPVTAVIPTWQALTTLDLSHNSISEIDESVKLIPKIEFLDLSHNGLLVVDNLQHLYNL
                     VHLDLSYNKLSSLEGLHTKLGNIKTLNLAGNLLESLSGLHKLYSLVNLDLRDNRIEQM
                     EEVRSIGSLPCLEHVSLLNNPLSIIPDYRTKVLAQFGERASEVCLDDTVTTEKELDTV
                     EVLKAIQKAKEVKSKLSNPEKKGGEDSRLSAAPCIRPSSSPPTVAPASASLPQPILSN
                     QGIMFVQEEALASSLSSTDSLTPEHQPIAQGCSDSLESIPAGQAASDDLRDVPGAVGG
                     ASPEHAEPEVQVVPGSGQIIFLPFTCIGYTATNQDFIQRLSTLIRQAIERQLPAWIEA
                     ANQREEGQGEQGEEEDEEEEEEEDVAENRYFEMGPPDVEEEEGGGQGEEEEEEEEDEE
                     AEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLVLTDFGIAVFE
                     IPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENTLFIISDAA
                     NLHEFHADLRSCFAPQHMAMLCSPILYGSHTSLQEFLRQLLTFYKVAGGCQERSQGCF
                     PVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEAVKSAAIPYWLLLTP
                     QHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSCTQPRGAFADGHVL
                     ELLVGYRFVTAIFVLPHEKFHFLRVYNQLRASLQDLKTVVIAKTPGTGGSPQGSFADG
                     QPAERRASNDQRPQEVPAEALAPAPVEVPAPAPAAASASGPAKTPAPAEASTSALVPE
                     ETPVEAPAPPPAEAPAQYPSEHLIQATSEENQIPPHLPACPSLRHVASLRGSAIIELF
                     HSSIAEVENEELRHLMWSSVVFYQTPGLEVTACVLLSTKAVYFVLHDGLRRYFSEPLQ
                     DFWHQKNTDYNNSPFHISQCFVLKLSDLQSVNVGLFDQHFRLTGSTPMQVVTCLTRDS
                     YLTHCFLQHLMVVLSSLERTPSPEPVDKDFYSEFGNKTTGKMENYELIHSSRVKFTYP
                     SEEEIGDLTFTVAQKMAEPEKAPALSILLYVQAFQVGMPPPGCCRGPLRPKTLLLTSS
                     EIFLLDEDCVHYPLPEFAKEPPQRDRYRLDDGRRVRDLDRVLMGYQTYPQALTLVFDD
                     VQGHDLMGSVTLDHFGEVPGGPARASQGREVQWQVFVPSAESREKLISLLARQWEALC
                     GRELPVELTG"
BASE COUNT         1055 a         1595 c         1476 g         1016 t
ORIGIN      
        1 agtctgcgcc gggcggcggt ggcggcggag acccgaacat ggcgaccgcg cgcaccttcg
       61 ggcccgagcg ggaagccgag ccggccaagg aagcgcgcgt cgtgggctcg gagcttgtgg
      121 acacttatac ggtttacatc atccaggtca ctgatggcag ccatgagtgg acagtaaagc
      181 accgctacag cgacttccat gacctgcatg aaaagctcgt tgcagagaga aagattgata
      241 aaaacctgct tccgcccaaa aagataattg ggaaaaactc aagaagcttg gtggagaaga
      301 gggagaagga tctggaggtc tacctccaga agctcctggc tgccttccct ggcgtgaccc
      361 ccagagtact ggcccacttc ttgcattttc acttctatga gataaatggc atcaccgcgg
      421 cactggctga agagctcttt gagaaaggag aacagctcct gggggccggc gaggtctttg
      481 ccattggacc cctgcagctg tatgccgtca cggagcagct gcagcaggga aagcccacgt
      541 gcgccagtgg ggatgccaag accgacctcg ggcacatcct ggacttcacc tgtcgcctta
      601 agtaccttaa ggtttctggc acagaaggac cttttgggac cagcaacatt caggagcagc
      661 tcctgccgtt cgacctatca atattcaagt ccctgcatca ggtggagata agtcactgtg
      721 atgctaagca catcagaggg ctggtcgcat cgaagcccac cttagccacg ctgagtgtcc
      781 gcttctcagc aacctcgatg aaggaagtcc ttgttcctga agcctcagaa tttgatgagt
      841 gggagcctga aggcacaacc ctagaaggcc ctgtgactgc cgtcatcccc acttggcagg
      901 cattgaccac gcttgacctg agccacaaca gcatctccga gatcgacgag tctgtgaaac
      961 tgatcccaaa gattgagttc ctggacctga gtcacaatgg attgctggtt gtggacaatc
     1021 tgcagcacct gtataacctt gtgcatctgg acctgtccta caacaagctc tcctccttgg
     1081 aagggcttca caccaagctg gggaacatca agaccttaaa cctggcaggc aacctcctag
     1141 agagtctgag tggcctgcac aagctctact cactggtcaa cctggatctc cgggacaaca
     1201 ggatcgaaca gatggaggag gtccggagca taggcagcct cccgtgtctg gagcacgtgt
     1261 ctctgctgaa caaccctctg agcatcatcc ccgactaccg gaccaaggtg ctggctcagt
     1321 tcggagagag ggcctcagag gtctgtctgg atgacacagt gaccacagag aaggagctgg
     1381 acactgtgga agtgctgaaa gcaattcaga aagccaagga ggtcaagtcc aaactgagca
     1441 acccagagaa gaagggtggt gaagactccc ggctctcagc tgccccctgc atcagaccca
     1501 gcagctcccc tcccactgtg gctcccgcat ctgcctccct gccccagccc atcctctcta
     1561 accaaggaat catgttcgtt caggaggagg ccctggccag cagcctctcg tccactgaca
     1621 gtctgactcc cgagcaccag cccattgccc agggatgttc tgattccttg gagtccatcc
     1681 ctgcgggaca ggcagcttcc gatgatttaa gggacgtgcc aggagctgtt ggtggtgcaa
     1741 gcccagaaca tgccgagccg gaggtccagg tggtgccggg gtctggccag atcatcttcc
     1801 tgcccttcac ctgcattggc tacacggcca ccaatcagga cttcatccag cgcctgagca
     1861 cactgatccg gcaggccatc gagcggcagc tgcctgcctg gatcgaggct gccaaccagc
     1921 gggaggaggg ccagggtgaa cagggcgagg aggaggatga ggaggaggaa gaagaggagg
     1981 acgtggctga gaaccgctac tttgaaatgg ggcccccaga cgtggaggag gaggagggag
     2041 gaggccaggg ggaggaagag gaggaggaag aggaggatga agaggccgag gaggagcgcc
     2101 tggctctgga atgggccctg ggcgcggacg aggacttcct gctggagcac atccgcatcc
     2161 tcaaggtgct gtggtgcttc ctgatccatg tgcagggcag tatccgccag ttcgccgcct
     2221 gccttgtgct caccgacttc ggcatcgcag tcttcgagat cccgcaccag gagtctcggg
     2281 gcagcagcca gcacatcctc tcctccctgc gctttgtctt ttgcttcccg catggcgacc
     2341 tcaccgagtt tggcttcctc atgccggagc tgtgtctggt gctcaaggta cggcacagtg
     2401 agaacacgct cttcattatc tcggacgccg ccaacctgca cgagttccac gcggacctgc
     2461 gctcatgctt tgcaccccag cacatggcca tgctgtgtag ccccatcctc tacggcagcc
     2521 acaccagcct gcaggagttc ctgcgccagc tgctcacctt ctacaaggtg gctggcggct
     2581 gccaggagcg cagccagggc tgcttccccg tctacctggt ctacagtgac aagcgcatgg
     2641 tgcagacggc cgccggggac tactcaggca acatcgagtg ggccagctgc acactctgtt
     2701 cagccgtgcg gcgctcctgc tgcgcgccct ctgaggccgt caagtccgcc gccatcccct
     2761 actggctgtt gctcacgccc cagcacctca acgtcatcaa ggccgacttc aaccccatgc
     2821 ccaaccgtgg cacccacaac tgtcgcaacc gcaacagctt caagctcagc cgtgtgccgc
     2881 tctccaccgt gctgctggac cccacacgca gctgtaccca gcctcggggc gcctttgctg
     2941 atggccacgt gctagagctg ctcgtggggt accgctttgt cactgccatc ttcgtgctgc
     3001 cccacgagaa gttccacttc ctgcgcgtct acaaccagct gcgggcctcg ctgcaggacc
     3061 tgaagactgt ggtcatcgcc aagacccccg ggacgggagg cagcccccag ggctcctttg
     3121 cggatggcca gcctgccgag cgcagggcca gcaatgacca gcgtccccag gaggtcccag
     3181 cagaggctct ggccccggcc ccagtggaag tcccagctcc agcccctgca gcagcctcag
     3241 cctcaggccc agcgaagact ccggccccag cagaggcctc aacttcagct ttggtcccag
     3301 aggagacgcc agtggaagct ccagccccac ccccagccga ggcccctgcc cagtacccga
     3361 gtgagcacct catccaggcc acctcggagg agaatcagat ccccccgcac ttgcctgcct
     3421 gcccgtcgct ccggcacgtc gccagcctgc ggggcagcgc catcatcgag ctcttccaca
     3481 gcagcattgc tgaggttgaa aacgaggagc tgaggcacct catgtggtcc tcggtggtgt
     3541 tctaccagac cccagggctg gaggtgactg cctgcgtgct gctctccacc aaggctgtgt
     3601 actttgtgct ccacgacggc ctccgccgct acttctcaga gccactgcag gatttctggc
     3661 atcagaaaaa caccgactac aacaacagcc ctttccacat ctcccagtgc ttcgtgctaa
     3721 agcttagtga cctgcagtca gtcaatgtgg ggcttttcga ccagcatttc cggctgacgg
     3781 gttccacccc gatgcaggtg gtcacgtgct tgacgcggga cagctacctg acgcactgct
     3841 tcctccagca cctcatggtc gtgctgtcct ctctggaacg cacgccctcg ccggagcctg
     3901 ttgacaagga cttctactcc gagtttggga acaagaccac agggaagatg gagaactacg
     3961 agctgatcca ctctagtcgc gtcaagttta cctaccccag tgaggaggag attggggacc
     4021 tgacgttcac tgtggcccaa aagatggctg agccagagaa ggccccagcc ctcagcatcc
     4081 tgctgtacgt gcaggccttc caggtgggca tgccaccccc tgggtgctgc aggggccccc
     4141 tgcgccccaa gacactcctg ctcaccagct ccgagatctt cctcctggat gaggactgtg
     4201 tccactaccc actgcccgag tttgccaaag agccgccgca gagagacagg taccggctgg
     4261 acgatggccg ccgcgtccgg gacctggacc gagtgctcat gggctaccag acctacccgc
     4321 aggccctcac cctcgtcttc gatgacgtgc aaggtcatga cctcatgggc agtgtcaccc
     4381 tggaccactt tggggaggtg ccaggtggcc cggctagagc cagccagggc cgtgaagtcc
     4441 agtggcaggt gtttgtcccc agtgctgaga gcagagagaa gctcatctcg ctgttggctc
     4501 gccagtggga ggccctgtgt ggccgtgagc tgcctgtcga gctcaccggc tagcccaggc
     4561 cacagccagc ctgtcgtgtc cagcctgacg cctactgggg cagggcagca ggcttttgtg
     4621 ttctctaaaa atgttttatc ctccctttgg taccttaatt tgactgtcct cgcagagaat
     4681 gtgaacatgt gtgtgtgttg tgttaattct ttctcatgtt gggagtgaga atgccgggcc
     4741 cctcagggct gtcggtgtgc tgtcagcctc ccacaggtgg tacagccgtg cacaccagtg
     4801 tcgtgtctgc tgttgtggga ccgttgttaa cacgtgacac tgtgggtctg actttctctt
     4861 ctacacgtcc tttcctgaag tgtcgagtcc agtcctttgt tgctgttgct gttgctgttg
     4921 ctgttgctgt tggcatcttg ctgctaatcc tgaggctggt agcagaatgc acattggaag
     4981 ctcccacccc atattgttct tcaaagtgga ggtctcccct gatccagaca agtgggagag
     5041 cccgtggggg caggggacct ggagctgcca gcaccaagcg tgattcctgc tgcctgtatt
     5101 ctctattcca ataaagcaga gtttgacaaa aaaaaaaaaa aa
//