LOCUS BC037896 2800 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 3,
mRNA (cDNA clone IMAGE:5275829), complete cds.
ACCESSION BC037896
VERSION BC037896.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2800)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2800)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: i Column: 4
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2800
/db_xref="H-InvDB:HIT000095014"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5275829"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2800
/gene="KCTD3"
/gene_synonym="NY-REN-45"
/db_xref="GeneID:51133"
/db_xref="HGNC:HGNC:21305"
/db_xref="IMGT/GENE-DB:21305"
/db_xref="MIM:21305"
CDS 1105..1614
/gene="KCTD3"
/gene_synonym="NY-REN-45"
/codon_start=1
/product="KCTD3 protein"
/protein_id="AAH37896.1"
/db_xref="GeneID:51133"
/db_xref="HGNC:HGNC:21305"
/db_xref="IMGT/GENE-DB:21305"
/db_xref="MIM:21305"
/translation="MRPYRESPLLARARRTESFHSYRDFQTINLNRNVERAVPENGNL
GPIQAEVKGATGECNISERKSPGVEIKSLRELDSGLEVHKIAEGFSESKKRSSEDENE
NKIEFRKKGGFEGGGFLGRKKVPYLASSPSTSDGGTDSPGTASPSPTKTTPSPRHKKS
DSSGQEYSL"
BASE COUNT 915 a 452 c 509 g 924 t
ORIGIN
1 agcgggctca agaatgagac taggatagtc tttatcacta catgtgggca tgtaggaatt
61 atctttttcc ctcctttttg tccggcctac taggaagctc atctaagctt catattctat
121 tcctgtatgc ttctcaaatt catgtggatt gtattttttt ttgtctattt ttttgacctt
181 gcgtttgcct atactgattt ttctttttta ataaactccc tcaactcttt tgaagtaggc
241 tgggataact aattcagtca agtacaattc agttagccct tacgtgactt tggaacaatc
301 atttgctgat gttatcccat tgtttcctga tccgtcaatg tggataaaaa ttgttctctc
361 tcaggttctt ttatctttta tgaaaatcaa ctaaaaagtc ataaaaatct ttttttgaag
421 ttgagtatta tcctaatgat ggatacaata tgggccatct ccatagagct gtatattttt
481 tctggtttca gattttaaag atttacacat aaattttaaa tgatttttta aaagtctttt
541 ctagtataac atgtttgctt tctttctttc tgtcttttta gtttcatagc ttctttttaa
601 ataattgctc attcccatca gggctctttc tgcttttctt ttgcagaata tgtgagatcc
661 aggctgttga ctgtactaca atatcctcat ttacagtgag ggaatgtgag ggatccagta
721 ggatgggctc aagaccaagg cgctacttgt tcacaggcca tacaaatggc agtattcaaa
781 tgtgggatct gaccactgct atggatatgg ttaacaaaag tgaagataag ggtaggttct
841 catacagaaa gatgtttgtc acaaggttaa gcttttcact taagtgattt taatgactat
901 ttgttctcct aagatgtagg tggtccaacc gaagaagagc tactcaaatt actcgatcaa
961 tgtgatttga acacatctcg ctgtgctact cctaacatca gtccagcaac ttccgtagtt
1021 cagcatagcc acttacgaga atcaaattct agccttcagc ttcagcacca tgataccacc
1081 catgaagcag ctacttacgg ttccatgagg ccttacagag aaagtccttt attagcaagg
1141 gcaagaagga ctgagagctt tcacagttat agggacttcc agactattaa tttgaacaga
1201 aatgtagaaa gagctgtccc tgaaaatggt aacttgggtc caatacaagc tgaagtgaaa
1261 ggggcaacag gggaatgtaa tatatctgag agaaagtctc ctggagtaga aataaaaagt
1321 ttgagagaat tggatagtgg attggaagtg cataaaatag ctgaaggttt ttcagaatcc
1381 aagaaaaggt catcagaaga tgaaaatgaa aataaaatag agtttaggaa gaaaggagga
1441 tttgaagggg gaggattcct tggaagaaag aaagttccct atctggcatc atcaccaagt
1501 acttccgatg gaggaactga ctcacctggt actgcgtccc catctcctac aaagactact
1561 ccatctcctc ggcataaaaa aagtgattct tcaggtcagg agtacagctt gtgaaaactc
1621 accaaaatga atagttgttt cgttacattt agatgaaagt taaactttac tgaatttcag
1681 tacattagtt tttacactaa aactttacaa gataaaattg gacttcattt agtatctttt
1741 taacagaatt acttggaata atgagataca ataatcatat ctcttttgac attttggaaa
1801 tttttttaat tttacaagta catttaacag atcatttata aagcaggagt ccattttaac
1861 acttaccgac tttttttggt ttggaaacat attaccacgt cttaatagga tggtgcccat
1921 ataggtgagc atccctttag atcatgggaa ccagcagact gcattcctaa tcttcattat
1981 gcctgagact tgtcttacaa tgttaccttt aagtgaatca cataattgtc tttggaactt
2041 ggtctcccaa cacttattgt gattgcaaag tgtttaccag atatttgatg aggtgctatg
2101 tttgtgaaaa acatatcatg taattcaaaa acactattga tattgaatac cggataccac
2161 tatgtagtaa gtcttttagg atgattttaa tttagtcgtg cgtcattttc tgattctcat
2221 cattgggaga tcttaaatct tagcaagcat tagcaatatt aaatgccaaa attccattga
2281 aactttcaag ttggagcaat tgtctgtgtt tgaaaagatg aaataaaaat aataatcaag
2341 ggcaaagctt tgagtgccca gaagggaaag ctgtaccagt tgctaacctg tcttgtttca
2401 ggagccacca tgtttttttt tcagtgttaa caacaatcat gataattaaa ttaaaacact
2461 agtttgttca cttgtaggac tgcagttctg aattttgggt taaaggtttt ggctgctgta
2521 agaatgtgaa tttgaatgta ttttgaattg taagagcaaa agaacgtttt tgtacaattt
2581 tttttcattt aattggaatg atcttcaggt ttctacaaat agggtaattg taaatttaaa
2641 gcattagcat ttattggtga ataatgtata tatccccatt ccaagaaata taagtgagtg
2701 aagttgaaat aaaatcttta aaattttaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaagaaaaa aaaaaaaaaa
//