LOCUS BC037886 3096 bp mRNA linear HUM 30-JUL-2005
DEFINITION Homo sapiens spermatogenesis associated 18 homolog (rat), mRNA
(cDNA clone IMAGE:5274651), partial cds.
ACCESSION BC037886
VERSION BC037886.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3096)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: g Column: 10.
FEATURES Location/Qualifiers
source 1..3096
/db_xref="H-InvDB:HIT000095007"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5274651"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3096
/gene="SPATA18"
/db_xref="GeneID:132671"
CDS <1..670
/gene="SPATA18"
/codon_start=2
/product="SPATA18 protein"
/protein_id="AAH37886.1"
/db_xref="GeneID:132671"
/translation="AECLLRRCIDKAETVQRIIYIATVEAFHVAKMAFRHFKIHVRKS
LTPSYVGSNDFENAVLDYVICHLDLYDSQSSVNDVIRAMNVNPKISFPPVVDFCLLSD
FIQEICCIAFAMQALEPPLDIAYGADGEVFNDCKYRRSYDSDFTAPLVLYHVWPALME
NDCVIMRGEAVTRRGAFWNSVRSVSRCRSRSLSPICPRSQIGLNTMSRSRSPSPIRCG
LPRF"
BASE COUNT 911 a 599 c 593 g 993 t
ORIGIN
1 agcggagtgc ctgctgcggc gctgcatcga caaggctgag accgttcagc ggatcatcta
61 catcgccaca gtggaggcat tccatgtagc aaaaatggca ttcagacact tcaagatcca
121 tgtgagaaaa tcgttgacac catcttatgt ggggtcgaat gactttgaga atgctgtctt
181 ggattatgtc atttgtcatc ttgatctata tgattctcaa agcagtgtca atgatgtgat
241 ccgagccatg aatgtcaatc ccaagatttc attccctcct gtcgttgact tttgccttct
301 cagtgacttc atccaggaga tatgttgcat tgcctttgca atgcaggcct tagaaccacc
361 cctagatatt gcatatggag cagatggaga agtttttaat gattgcaaat accgccgcag
421 ctacgactcg gatttcactg ctcccttagt cctctatcac gtgtggcctg ctctcatgga
481 gaatgactgt gtcattatga ggggagaagc tgtcaccagg agaggggctt tttggaattc
541 ggtgcgatct gtaagtcgtt gtcgaagcag gagtttaagt cccatttgcc cccgtagcca
601 aattggttta aacacgatgt ctcgaagtcg gagtccttct ccaataagat gtggattgcc
661 aagattttaa aagcaccaga cctgctcctt tgacccagtg cgtggaaaca gctgctttct
721 ccagtgccgc catctgtctt ctgtgtctgc ctcagacctc acttaagata atgtcaaaag
781 gcaattctgt gtatcacccc acacagagag ttaaatgttt tggcttggcg catttgtaac
841 tttagatata ttgcattcta ttttatttta tagatactaa ttccattaat ttcataaaaa
901 tgattgtata ggcatttagg atcatattca ttcgaagcaa agtccgttac aaaggttcaa
961 gatttccatc tcaaaacact acgctctttt atgggaactg tgtgaactga agtggaaagc
1021 atctaccatg ctgaggctaa aagaaaagat gaatcatttt agtttgcaga tggatcgtaa
1081 atataattgt tggtatcagc tttagctcaa aaccaatatt aggtgtttta atttcctttt
1141 aaggtttgga agacagccct aatctcaggt tggggagctc atgttagtag cagtgactta
1201 aggctaagtg tagaagataa tttaagatac attttcttta tatattagcc aacaaattat
1261 atttattggt tggcttgctt ttccgttctg attttgagag tgcccagttt ggtttagttg
1321 accaatgaat gtcaaagcta cttagttgag agaatttcct tgttcataaa tgtagagcag
1381 tgatttgatt agaagccagc tttgagataa atgttaatta cctcatgcat atctcctggg
1441 aatatttcaa actgttttaa tgcatgtgtt atatataaaa gtttcttggg acatgctctt
1501 cacctgttct acctagttat ttgcaaattc agacctccta ttgaactctg tctgaccaaa
1561 actacttaaa ctcaaggccc aaaactaggg gcaccattta ctgattttaa attgagtata
1621 tatcccttga cttcttcact gtcaaatact tttgaaactt cacgttcaag ataagaatgg
1681 aatgttgctt tcttgcaata agtaatgttc tttctgcctt tttttcactt ttaagtcagc
1741 cttaaacaca tgcctcacaa acatctactt tctccacata cctttgagag agacactgaa
1801 ttggcctcag ctcagttttg cataagctta gtgccagaac cagcacctga tgcttttcag
1861 gtgaaaataa aacaaacagc ttctctaaag catcttaccc ctgtgctgga ggtttgaggg
1921 acctcttcag tgcctgcccc ttgagtctaa tggtcaccac ctcattctga agtatgagtt
1981 gaattttttg ccctctttgc atatttacat tagtcatcac tttgaagcaa tgcagtgtgc
2041 tggaaggagc actatctgcc taggtaactg ctagtcatga cctggtcatc agcttgcttt
2101 gtggcactga gcaagttact tcacttctct gagccttggt tttatcatag ggtgaggagg
2161 ttggatacaa ttagtgcccc tcttaaccct gcagactcaa tgttcccttt tataacaagt
2221 attttattct gaatatgaaa tgaaaattaa agttaatata atcatctatg tgcatgtata
2281 attttaagca gtgaacatag taccctaact ataatataaa gcagaaaaaa aggcaacttt
2341 taataaaata aaatgtattt caataaaaaa gcttgggtat aaccacccta gaagataaaa
2401 ttaagtcatt agatggctga acctgcatgt agagccccag ctacaaatga aaatcaatgt
2461 gtgtattggc aacagaaaat cacggtgttg tcattggatg tgactttctg aagtggtggg
2521 caattcttgt taatgtttta aacaaaaaaa aaaacacctt acagtcttgc cctgatttac
2581 acagcagtca cattcctgga aaattcgagt gtttattaaa actatgcaac agttactgtg
2641 tgttatacgt tgaaaggtct tcactaatat ctcactaagt aatgagaatg cctacatatc
2701 agaatttttt tttcaggagc caagcacata tactgatttg gaaaaaggca caggtagctc
2761 agtttatttg ctttctaccc tgcctggcca cttgctgttt cttcagtttc taatttgagc
2821 tgtaactaca caaggaaagc taaatagtct ggaacatttt tggaaagaat ccacaaagcc
2881 aaaggagact ggcctatact cattttatct ggggatgtac cttaccctta gagactttga
2941 aaaatgtgaa gctcttattt tgtaacctgg gtaaatgtta gtttctagat tttcggctta
3001 acatctaata ataacattta aaaagtgctt ttgtaactat tagttatttg caataaaatg
3061 ctttccttct acaaaaaaag aaaaaaaaaa aaaaaa
//