LOCUS BC037878 2780 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens solute carrier family 35, member F3, mRNA (cDNA clone
MGC:43868 IMAGE:5273868), complete cds.
ACCESSION BC037878
VERSION BC037878.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2780)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2780)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: e Column: 24.
FEATURES Location/Qualifiers
source 1..2780
/db_xref="H-InvDB:HIT000051959"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43868 IMAGE:5273868"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2780
/gene="SLC35F3"
/gene_synonym="FLJ37712"
/db_xref="GeneID:148641"
/db_xref="HGNC:HGNC:23616"
CDS 233..1498
/gene="SLC35F3"
/gene_synonym="FLJ37712"
/codon_start=1
/product="solute carrier family 35, member F3"
/protein_id="AAH37878.1"
/db_xref="GeneID:148641"
/db_xref="HGNC:HGNC:23616"
/translation="MKKHSARVAPLSACNSPVLTLTKVEGEERPRDSPGPAEAQAPAG
VEAGGRASRRCWTCSRAQLKKIFWGVAVVLCVCSSWAGSTQLAKLTFRKFDAPFTLTW
FATNWNFLFFPLYYVGHVCKSTEKQSVKQRYRECCRFFGDNGLTLKVFFTKAAPFGVL
WTLTNYLYLHAIKKINTTDVSVLFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGI
VMMTYADGFHSHCVIGIALVVASASMSALYKVLFKLLLGSAKFGEAALFLSILGVFNI
LFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSLG
IVLSIPVNAVIDHYTSQIVFNGVRVIAIIIIGLGFLLLLLPEEWDVWLIKLLTRLKVR
KKEEPAEGAADLSSGPQSKNRRARPSFAR"
BASE COUNT 677 a 645 c 732 g 726 t
ORIGIN
1 agcgggctgc gcggccgggg aggatgtgcg ctgcagggcg gccgccgcag tgagcaacgc
61 ggcaaccgga gcccggcggg cagccgggga ggccgggact gagaggggcg agccgctggt
121 gctccccggc ggcagagggc cgcgtcggcc acgggcccgg gagagacgcg ctccagccgg
181 ccccaggatg taggcgatcg gcggcagcgc tcctgcaggc ggccggctca tcatgaagaa
241 gcactcggcc cgggtggccc cgctcagcgc ctgcaacagt ccggtcctga cccttaccaa
301 agtggaaggg gaggagcgcc cccgggactc cccgggcccg gcggaggccc aggcaccggc
361 cggggtggag gccggcggga gagcgagtcg ccgctgctgg acgtgctccc gggcgcaact
421 caagaagatc ttctggggcg tggcggtcgt gctgtgcgtg tgctcctcgt gggcgggctc
481 cacgcagctc gccaagctga ccttcaggaa gttcgacgcg cccttcaccc tcacgtggtt
541 tgccaccaac tggaactttt tattcttccc gttgtactac gtggggcacg tctgcaagtc
601 cacagagaag cagtctgtga agcagcgata cagggaatgc tgtcgatttt ttggagacaa
661 tggcttgact ttgaaggtgt tttttaccaa ggcagcaccc tttggtgttc tttggacact
721 cacaaactac ctgtacttac atgcaataaa gaaaataaac actacggatg tctccgtgtt
781 gttctgctgc aacaaagctt ttgtgttctt gctctcatgg atcgttctca gggacagatt
841 catgggagtg aggattgtgg ccgccatcct cgccatcgct ggcattgtga tgatgaccta
901 cgctgatggc ttccacagcc actgcgtcat cggcatcgca ctggtggtgg cctcagcatc
961 gatgtctgcc ctctacaagg ttttgttcaa gctcctcctg ggcagtgcta agtttggaga
1021 agccgcctta tttttgtcca tcttgggtgt gtttaacatc ctcttcatca cctgcattcc
1081 tattatcctc tactttacca aagtggaata ctggagctct tttgatgaca ttccatgggg
1141 aaacctttgt ggattttcag ttcttttatt gacattcaat attgtattaa attttggaat
1201 tgccgttaca tatcccactc tgatgtctct tggaatcgtc ctcagcatac ctgtgaatgc
1261 agtgattgat cactacacca gtcagatcgt cttcaatggg gtccgggtca tcgccatcat
1321 catcatcggc ctgggttttc tcctcctgct cctgccagag gagtgggatg tctggttgat
1381 caagctgctc acccgactca aagtgaggaa gaaggaggag cctgcagagg gcgctgccga
1441 cctgagctca ggacctcaga gcaagaacag aagagcccgc ccttccttcg cccgctaaca
1501 ccactcctct agaactcggt ggtaatgact gggaggtcta ttcctgccgg gaggaacctc
1561 agttgggtaa ggtgtacata cctgtacagt tttggtcatc tgcggtaagt tctatggtat
1621 ttattggcat gtccaatttg cttgcacttt tccacatcag accttccact taagggtacc
1681 aattcaatac aaaagagaaa agaagaacct ctcagtgctt ttccaacgaa tgtaaagtgg
1741 gtttaaaagt tccctgcgta gatcgttttg gatggctgac gttcttgaca agccagccat
1801 cagggcaagt gttttgaatc ttagcaagtg ttttgaatct tagcaactga acatgacatt
1861 gcacactgtg attatttttc agctatggta ggtcatattt tgttttatac cagagctgta
1921 ctcttaattt taaggaattt caatgaacca aaagataact gtcaatttat ttggatggat
1981 ggatggaggg atggaaggag ggagggaagg atgtctggga tgtgaagagg caaggcagaa
2041 atggatgatg aacatcaaaa actgtcagag gacaggtctg tgccaggtac caggaaggac
2101 aagataagtc caagccccgg ctggcctgct ctcacgtgtc tgtgtaagat catgcaagag
2161 aaatcacagt gccttctaca gaattttcgt ctttacctat gtgaagcgag gtgacgtgat
2221 acgtcactgg cgccgtctta taatttagat gtaaaaatct ttagaaacaa ataaaactct
2281 ctatatatgt gtatgtctgt gtacaaaaaa atgacagagc tgatggccag tgtatacaga
2341 gcgtggcccg cggtgtacaa tacccatata aggtacattg tgcaggaggg gaattgctgg
2401 ctgcttttac ttcctgacca agactgaaaa attatttact gaaatctgta aaccttttta
2461 tgaaactttt aagcaccagg ctgtttactt acacaattta ggtctgccag aaaattctat
2521 ctgtgataga tctgtaaaga gggtcagggg ttagagttta ctatttttga agtttacatt
2581 gttacatatg aaatggaaac attattttga aacgttgtca taacccaatg gtgcattctg
2641 taaccatgga gtcttctgtt tcctggggga aaggggcatt catgacctga actttttagc
2701 aaattattat tctcagtttc cattacctgt ttggccaaac agattaataa aatatttgaa
2761 aaagaaaaaa aaaaaaaaaa
//