LOCUS BC037876 3486 bp mRNA linear HUM 12-JAN-2006
DEFINITION Homo sapiens chromosome 17 open reading frame 57, mRNA (cDNA clone
MGC:43855 IMAGE:5273577), complete cds.
ACCESSION BC037876
VERSION BC037876.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3486)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3486)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222281.
FEATURES Location/Qualifiers
source 1..3486
/db_xref="H-InvDB:HIT000094998"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43855 IMAGE:5273577"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3486
/gene="C17orf57"
/gene_synonym="FLJ40342"
/db_xref="GeneID:124989"
/db_xref="HGNC:HGNC:26864"
/db_xref="IMGT/GENE-DB:26864"
/db_xref="MIM:26864"
CDS 1131..2726
/gene="C17orf57"
/gene_synonym="FLJ40342"
/codon_start=1
/product="C17orf57 protein"
/protein_id="AAH37876.1"
/db_xref="GeneID:124989"
/db_xref="HGNC:HGNC:26864"
/db_xref="IMGT/GENE-DB:26864"
/db_xref="MIM:26864"
/translation="MENDDLESKRPKNTWQIRKFLGGVGSSNVGVQEPYSKNGINFKK
HSEKGEIHDSKSKPQSLKSSTSLSKSLDKSDISSIPKLQKPAVRKHSSLQKQVSSTEK
TAISTLENFCEAISKLQENYIAAEELQSILPSTGINLLDEEFQKIVTDTSRNENGMVE
LDDFVNALAKERSFPECNALPGVIKAIDKIKDKNVDYEDLNTCLQNFGIYLSKPEFKK
ITELTEAGETKKVNFKEFIDTMMSNTECFSEKLVLPDAIETLDDLRKETMSVSDLWNT
LSSLNSNLKKDEFLAALELVTVDEGDKVQFEEFAKVVRNMRDAARLEELQEVVLAADL
LEGDMIAGKNLEDFLRNVGIKSPKEEVEKILQSDFVSEDNMVNIKDCMRALRDTQKFS
NYIDFRKEASNLKLPKVNEIKEAANILSHVDNGKIGIPDLEHALKCLNVNLTEEDFNE
ALNCCNVSDNMEVDLKDFLMKMKESPHFQKSKATQILLATTQILQNDLVDVSDLKTLL
MDKDLHTANAILTVMLRHVPEHG"
BASE COUNT 1178 a 546 c 754 g 1008 t
ORIGIN
1 agcggagggg gcgcgggggc ctccagccga gaggaaggga gggcagctcg ggccgaagtc
61 gttggcttcg taagagcagg gtctatggga agcctcctca gcgtgggttc ttggaagagg
121 tggagtttgg agaggcttat gcggtacctg attcatccag caaattaaga cctgccaact
181 ttttgataat ctcgtcaata aattacagaa caattgttcc tttcaagatt tattcaaaac
241 gtgtcaactc tgcttaatta agcactttga tgatttaaga aatcttggaa atccttttgt
301 actattgctc attcatactt gttcatcaaa gcctggagtc cttaaggaca gaatttgcct
361 ctaaacagaa agatggaaac taaagtacat ttattctgcc aggcagagga aaatattgac
421 ttattagatg atggctctaa ttcttttgca actgacttgt catcaggaac tattaaccac
481 aagaaataca tcaagttttc taaaacaata gagaaggaaa tttcaccgga aattaggagt
541 ttgagcccag aatataaaaa aatatttgaa acatcaataa tcttttgtgg agaagaaaag
601 tcctctgatt tttcaggaga aaaaaaagtt gggagaaaga gtttacaagt acaacagcac
661 agtaaaagaa ctgagattat ccctcctttt ctgaagctgt caaaggagaa ggtgacaagg
721 aaagaaaact ctttatgcaa gttgccgaat cagtacagcg ttcacaagac ttcatcacct
781 ctttgtacat cttctgcaat tactcgggaa aaggaaatgc tgtctaacct ctacatgaca
841 ttatatgatg aagtaaccca tggatattta cactcaaaag aattaagtgg taaccacatg
901 gtggatattg gggatattat atttactttg aatgagctac aggaacagta tgaggatgtt
961 tcaattacag aaggatcacc tttgaatgaa attacttcag acagaaagtt atcaagtata
1021 gcaggatgct atctaaaata taagaagaaa aatagtttgt cttccaaact ccctgaacct
1081 tcaatatcca aaaagttaaa taaaaaagca accaatatta tagcaaaatt atggagaatg
1141 atgaccttga atctaaaaga ccaaaaaata cttggcaaat aagaaaattt ctgggtgggg
1201 ttggcagcag taatgtagga gtccaagaac catattcaaa gaatggcata aactttaaaa
1261 aacattcaga gaagggtgaa attcatgact caaagtctaa accacaaagc ttgaagagta
1321 gtacaagcct cagtaagtct ctggataaaa gtgatatttc tagtatccca aaacttcaga
1381 agccagctgt aagaaagcat tccagtctcc aaaaacaggt ttcgtctacg gaaaaaactg
1441 caattagtac tctggaaaac ttctgtgaag ctatcagtaa acttcaagaa aattacattg
1501 cagcagaaga acttcagtct attttgcctt caacaggaat taatttatta gatgaagaat
1561 tccagaagat tgtgacagac actagtagaa atgagaatgg aatggtggag ttagatgact
1621 ttgtaaatgc tctcgccaag gagcgaagtt ttcctgaatg caatgcgttg cctggtgtca
1681 ttaaagccat tgataaaatt aaagataaaa atgtggatta tgaggatcta aatacttgtc
1741 ttcaaaattt tggtatttac ctttctaagc cagaatttaa gaagatcaca gaactgactg
1801 aagctggtga aacaaaaaaa gtgaatttta aagaattcat tgatactatg atgagcaaca
1861 cggaatgctt ctctgaaaaa ttagtattgc ctgatgctat tgaaaccctc gacgatctca
1921 gaaaggagac gatgagtgtt tctgacctgt ggaatactct gtctagtttg aatagtaatt
1981 taaaaaagga tgaatttcta gctgcattgg aactagtgac agttgatgaa ggtgacaaag
2041 tacaatttga agaatttgca aaagtagtaa ggaatatgcg tgatgctgcc aggttagaag
2101 agttacagga agttgtctta gctgctgatt tgctggaagg tgacatgata gctgggaaga
2161 acttggaaga ctttctaaga aatgttggga ttaagtcacc taaagaagag gtagagaaaa
2221 ttcttcaatc agattttgtt tctgaagata acatggtgaa cattaaagac tgtatgaggg
2281 ctttgaggga cacccagaaa ttttccaatt atattgattt caggaaagag gcttcaaatc
2341 taaaattacc aaaggtaaac gagattaaag aagctgctaa catcttgtca catgtcgata
2401 atggcaagat tggtatacct gatttggagc atgccttgaa atgtttgaat gttaatttaa
2461 ctgaggagga cttcaatgaa gcccttaact gttgtaacgt cagtgataat atggaggtgg
2521 atttaaaaga tttcttaatg aaaatgaaag aaagtccaca tttccaaaag tccaaggcta
2581 cacagatact cttagctact acccaaattc tccagaatga tctagttgat gtctctgacc
2641 tcaagacatt attgatggac aaggaccttc atacagctaa tgctatactt actgtaatgt
2701 taagacatgt acctgaacat ggttagtagt ttcaatgcgt ctatcttata aggaccatcc
2761 tctaccacag gggtggaagg tctatgggta ggacatgcag ggatggaggg tatcctgtgg
2821 aagctgaggt gggatgactg ctggacactg gtactgcccc tacaggtgtg ccaaccctga
2881 gcttcatggg gccaaacaaa tggggaagtc agagctcatc ttatcactgt gtgagtccac
2941 tgacagtacc taggaggtga gattattttg tgaactgact gacatgcaca gtggtcaatc
3001 agaatgccat ccatagagta aaacagggtc ctggaggccc ttttggtttt tggaaggtaa
3061 attatgatga tatccaggga taccaggggg tgttgcacat agtggtggct cagggcagca
3121 gatatttata aatataaaaa ataattttac tattttaatg acaggtatag ctgaatatta
3181 tccatgatgg gttcttaaaa tgagttgggg agtatttttt tgttttgttt tttaaaagag
3241 acttttttct tccttgaatg ttgagtagaa ttcataggtg aagccatgtg ggccaagagt
3301 ttttttttgt gaaaggcttt ggattattta tttaatgtct ttaaatgaat aggattaaca
3361 aggtattcta ttttcttgtt agttttggca agctatgttt ttagaggaat tcgttcatta
3421 gatctgcctt ttcaaatgta ttgaataaag ttgttctctt tttgacatct gaaaaaaaaa
3481 aaaaaa
//