LOCUS BC037779 1765 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens zinc finger protein 165, mRNA (cDNA clone MGC:41869
IMAGE:5272359), complete cds.
ACCESSION BC037779
VERSION BC037779.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1765)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1765)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC037779.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 75 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30181234.
FEATURES Location/Qualifiers
source 1..1765
/db_xref="H-InvDB:HIT000051952"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41869 IMAGE:5272359"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1765
/gene="ZNF165"
/gene_synonym="LD65"
/gene_synonym="ZSCAN7"
/db_xref="GeneID:7718"
/db_xref="MIM:600834"
CDS 206..1663
/gene="ZNF165"
/gene_synonym="LD65"
/gene_synonym="ZSCAN7"
/codon_start=1
/product="ZNF165 protein"
/protein_id="AAH37779.1"
/db_xref="GeneID:7718"
/db_xref="MIM:600834"
/translation="MATEPKKAAAQNSPEDEGLLIVKIGEEEFIHGQDTCLQRSELLK
QELCRQLFRQFCYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILP
GDLQAWVHEHYPESGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALN
VKLQPVETKAHFDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISE
ASGESQDICKSAGRVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCE
RRLNLNSNEFTHQKSCKHGTCDQSSKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKH
AAVFSGDKTHQCNECGKAFRHSSKLARHQRIQTGERCYECNECGKSFAESSDLTRHRR
IHTGERPFGCRECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIH
TGEKPYECSECGRAFSQSSNLSQHQRIHMRENLLM"
BASE COUNT 599 a 356 c 425 g 385 t
ORIGIN
1 ggatttgggg tcactggtaa gaggagttgc ccattccagc caggtggaac ggggaggggt
61 gccacatgtc tcagatctgc cattgtctgc gaaaagaaac tgctgcgagg accatcccca
121 atcccctgct tcccttggga agagtaaccg ccgttttgta ggacacttgg ggacaacccc
181 gcttgtcctg aaatttattg acacgatggc tacagaacca aagaaagctg cagcccagaa
241 ctctccagag gatgaaggac ttctgatagt gaagatagga gaggaagaat ttatccatgg
301 gcaggacact tgcttacaga gaagtgaact ccttaagcag gagctctgca ggcagctttt
361 taggcagttc tgctaccagg attctcctgg acctcgcgag gcactgagcc gcctccggga
421 gctctgctgt cagtggctga agccagagat ccataccaag gaacagattc tggaactgct
481 ggtgctagag cagttcctga ccatcctgcc aggagatttg caggcctggg tacatgaaca
541 ttacccagag agtggagagg aggcagtgac catactagaa gatttggaga gaggcactga
601 tgaagcagta ctccaggttc aagcccatga acatggacaa gaaatattcc agaaaaaagt
661 gtcacctcct ggaccagcac ttaatgtcaa gttacagcca gtggagacca aggcccattt
721 tgattcatca gaaccccagc tcctatggga ctgtgataat gagagtgaaa acagtagatc
781 catgccaaag ctggaaattt ttgaaaaaat tgaatcacag agaattatat ctggaagaat
841 ctcaggatac atatcagaag catctggtga gtctcaagac atctgtaagt ctgcaggcag
901 ggtaaagaga caatgggaaa aagaatcagg ggagtctcag agactctcgt ctgcccagga
961 tgaaggtttt ggtaaaatcc tcacccacaa aaatacagtc agaggtgaaa taataagcca
1021 cgatggatgt gagaggagat taaatctgaa ctcaaatgaa ttcacacacc agaaatcttg
1081 taaacatggt acctgtgacc agagctccaa atggaactca gattttatta accatcaaat
1141 aatttatgct ggagaaaaaa atcaccaata tggaaaatct ttcaagagcc caaaacttgc
1201 taaacatgca gcagttttca gtggagataa aactcatcag tgtaatgaat gtgggaaagc
1261 tttcaggcac agctcaaaac ttgctaggca tcagagaatc caaactggag agagatgcta
1321 tgaatgtaat gaatgtggga aaagctttgc agagagctca gatcttacta gacatcggcg
1381 aattcacact ggggaaagac cctttggttg cagagaatgt gggagagcat tcaacctgaa
1441 ctcacatctt atcaggcatc agagaattca caccagagag aaaccctacg agtgtagtga
1501 atgtgggaaa accttccgag tgagctcaca tcttattcga cactttagaa ttcacactgg
1561 agaaaaaccc tatgaatgca gtgagtgtgg aagagccttc agtcagagct caaaccttag
1621 tcaacaccag agaattcaca tgagggaaaa cctattaatg taaggaactt aaatttgtaa
1681 gtaaatgctg aggaaatggc acaatatgaa aaatattaaa taaaaaataa atattgggca
1741 agaaaaaaga aaaaaaaaaa aaaaa
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