LOCUS BC037574 3846 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 46, mRNA (cDNA clone
MGC:44970 IMAGE:5529667), complete cds.
ACCESSION BC037574
VERSION BC037574.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3846)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3846)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: j Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377708.
FEATURES Location/Qualifiers
source 1..3846
/db_xref="H-InvDB:HIT000051941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44970 IMAGE:5529667"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3846
/gene="USP46"
/gene_synonym="FLJ12552"
/db_xref="GeneID:64854"
/db_xref="HGNC:HGNC:20075"
CDS 135..1235
/gene="USP46"
/gene_synonym="FLJ12552"
/codon_start=1
/product="ubiquitin specific peptidase 46"
/protein_id="AAH37574.1"
/db_xref="GeneID:64854"
/db_xref="HGNC:HGNC:20075"
/translation="MTVRNIASICNMGTNASALEKDIGPEQFPINEHYFGLVNFGNTC
YCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKKVGVIPPKKF
ISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAEN
NKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNT
ETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVF
PLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEK
IDAQAIEEFYGLTSDISKNSESGYILFYQSRE"
BASE COUNT 1123 a 753 c 820 g 1150 t
ORIGIN
1 ccacgcgtcc gactgaaagc cggaccccag gccgccgcgc tgccgcccgg cctccccgcc
61 agcgcgccac catgggcagt cccggtttcc ccttgtaaag atggcggtga gggatcgctg
121 caacctttag actaatgact gtccgaaaca tcgcctccat ctgtaatatg ggcaccaatg
181 cctctgctct ggaaaaagac attggtccag agcagtttcc aatcaatgaa cactatttcg
241 gattggtcaa ttttggaaac acatgctact gtaactccgt gcttcaggca ttgtacttct
301 gccgtccatt ccgggagaat gtgttggcat acaaggccca gcaaaagaag aaggaaaact
361 tgctgacgtg cctggcggac cttttccaca gcattgccac acagaagaag aaggttggcg
421 tcatcccacc aaagaagttc atttcaaggc tgagaaaaga gaatgatctc tttgataact
481 acatgcagca ggatgctcat gaatttttaa attatttgct aaacactatt gcggacatcc
541 ttcaggagga gaagaaacag gaaaaacaaa atggaaaatt aaaaaatggc aacatgaacg
601 aacctgcgga aaataataaa ccagaactca cctgggtcca tgagattttt cagggaacgc
661 ttaccaatga aactcgatgc ttgaactgtg aaactgttag tagcaaagat gaagattttc
721 ttgacctttc tgttgatgtg gagcagaata catccattac ccactgtcta agagacttca
781 gcaacacaga aacactgtgt agtgaacaaa aatattattg tgaaacatgc tgcagcaaac
841 aagaagccca gaaaaggatg agggtaaaaa agctgcccat gatcttggcc ctgcacctaa
901 agcggttcaa gtacatggag cagctgcaca gatacaccaa gctgtcttac cgtgtggtct
961 tccctctgga actccggctc ttcaacacct ccagtgatgc agtgaacctg gaccgcatgt
1021 atgacttggt tgcggtggtc gttcactgtg gcagtggtcc taatcgtggg cattatatca
1081 ctattgtgaa aagtcacggc ttctggcttt tgtttgatga tgacattgta gagaaaatag
1141 atgctcaagc tattgaagaa ttctatggcc tgacgtcaga tatatcaaaa aattcagaat
1201 ctggatatat tttattctat cagtcaagag agtaactgaa agacctgcgg gactgattca
1261 cgtggggaga atgttcacag cactgtcacc cggcttctcc gcaggctttc ctcttcccca
1321 gtggcccact aatggtatca ctccgagtct caatggtctg gctgtgttag actctctcct
1381 tttgtgtttt tacatgcagc actactcttg gttttatttc agtctgacat agagttaact
1441 gcaatcagat tgtagtctga tttatatgaa taacggttgc taattttagg actgggtgaa
1501 agctatgcca ttcattatgt ctggctgtat tagaatgaca tttcctatga atgtctacgg
1561 tctgttttag gtgtttgcta aacttctatg gcttccaggg tcttcttaca atgcattcct
1621 ttaacttgtc cctggaagca ttgctaccca ttttcagctt ctctgcctct cttctgatac
1681 aaggacagaa gaattgggta gatattcacc ttttaggggt gcaagtatag ctttaagttt
1741 gtgcaagtga aaatgttgaa aagtgagtaa cctcgatatt aaaatcatcc ttgacatgaa
1801 acagggtgaa gagaagctgt ccgtggcggc tggtgttggc tggcattggc actgggctgt
1861 gctgacctag ccattacaat tccaggggct aagaaggctc agggcagaca aagtcaagag
1921 gaggaagttt ttgtggacaa tgaaaagtta ttttcgtacc tttctaccaa aaccaagttt
1981 caggaaaata actctatgtt gtttattttc agtgacactt atgtaaggcc ctgtgagttg
2041 tatttatcct gtatccggca ctgctaagct tttcaaggta tctttccaat cctgctgatg
2101 tggcagtcaa tggctgcagg gctggcaaac ctccccttag ccagtcagca cggcattgtt
2161 ccttatcagg aataacaaag gtactacatc tttccagcca tcagcacgtt gtacaactta
2221 actttttaac atagtccgtc tgtttactga ggcactggcg agtcccaggg ctgatacaga
2281 accttcccta gagggaatac cagagttagc tgggtataga ggtggctcaa aggaagtgtc
2341 cgtgggcagg gggaggaatg aacaaaatgg cgctgtttct ttggctcaga ctcctagaat
2401 gcttgacaag acagaatttt tttggaagaa cctcatctca ctatagttac ttttttcact
2461 tttgttatat atgtatttat tagagcattt gaatattggt acctttaaaa gggtcatttg
2521 gtgttttgct gttgagctgg tttttgagtc atagatcttg gcttccttta gaagccactt
2581 aacttccata cactataata aactgtgaac atatttttgt tacctaatgc atccactgat
2641 gaacatgcaa actttgggca taatgtgaac taaaattgaa atggaaaatg ttagtggcca
2701 ttttgcaaca atgaagagga tagcacttta tctagatgaa aactggattt cttatctttg
2761 aaatatcttg aactgtttat tgctcagaac ttaagtaagc atgccaacat ttcgtttgtt
2821 tatgcttgaa gtgaaatgtt ttacttttca ctggagaaga caaaacaggg tgatcttcat
2881 gttattgttt tatacaagtg atggaaatgt accttgcctt gtttagaggc aatttcacat
2941 ttataaatat ttttttttcc tccatgaaac ttacgcagta atcactacct ggaaggtgag
3001 ttttgatctc tttttaagga gaggcacttt ccaactgaag gtgattgatg tagggaaatg
3061 tttgtactat atagaatcca tatatttgac tgcaagttac aaagttttaa gaacatgatg
3121 gttggtctct aatatatttg gaactgattc ataagaaaag ttattaaaat tatctttgaa
3181 acacctcttg aagctaattt attagaaaaa atatttcagt tggaaggctg tagaagtaat
3241 gtttaaatgc taagtcataa gttcaggata tttcttttct atttggttgt gcaaaatgtt
3301 tttcccagtt atttaatcga agtaattcct tttaatagaa agagtcagtt aaaattcagc
3361 attcatggat agatttttgg aacgaaaaag ggtaagtata agaaaatatt gcaaacacat
3421 taaaacagtt gtatggtgca ggaaaagaag attggaaaaa gaccaaaaca cacttctcca
3481 gcaacactcc atcagctttt taaaatttag agctatctgc taattttttc cctcttcctt
3541 ctcaataaat gaaacaaaca ctgggcagct gcaggtttct cccaatcatg tctctttatg
3601 taaagacagt aacatgcaaa cacttttagt ttacatccct cattcacagt gtaaagcagg
3661 aaatggtgtg ggagatgtga gaccattctg aggtcagcga tagcccaaag gctctgcagt
3721 attccctcca atggccaagg attccgtgtg tcatctgcag gagtgagtag gcctgctgta
3781 tttcttgtaa ctgctgggtg ttacaaaata agttacaatg ttttacactt taaaaaaaaa
3841 aaaaaa
//