LOCUS BC037565 2943 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens ribonucleoprotein, PTB-binding 1, mRNA (cDNA clone
IMAGE:5113697), partial cds.
ACCESSION BC037565
VERSION BC037565.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2943)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2943)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: d Column: 14.
FEATURES Location/Qualifiers
source 1..2943
/db_xref="H-InvDB:HIT000094889"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5113697"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2943
/gene="RAVER1"
/gene_synonym="KIAA1978"
/db_xref="GeneID:125950"
/db_xref="HGNC:HGNC:30296"
/db_xref="MIM:609950"
CDS <1..1688
/gene="RAVER1"
/gene_synonym="KIAA1978"
/codon_start=3
/product="RAVER1 protein"
/protein_id="AAH37565.1"
/db_xref="GeneID:125950"
/db_xref="HGNC:HGNC:30296"
/db_xref="MIM:609950"
/translation="TRPKKDSAARAKSDLLGKPLGPRTLYVHWTDAGQLTPALLHSRC
LCVDRLPPGFNDVDALCRALSAVHSPTFCQLACGQDGQLKGFAVLEYETAEMAEEAQQ
QADGLSLGGSHLRVSFCAPGPPGRSMLAALIAAQATALNRGKGLLPEPNILQLLNNLG
PSASLQLLLNPLLHGSAGGKQGLLGAPPAMPLLNGPALSTALLQLALQTQGQKKPGIL
GDSPLGALQPGAQPANPLLGELPAGGGLPPELPPRRGKPPPLLPSVLGPAGGDREALG
LGPPAAQLTPPPAPVGLRGSGLRGLQKDSGPLPTPPGVSLLGEPPKDYRIPLNPYLNL
HSLLPASNLAGKEARGWGGAGRSRRPAEGPLTNPPAPGGGSSSSKAFQLKSRLLSPLS
SARLPPEPGLSDSYSFDYPSDMGPRRLFSHPREPALGPHGPSRHKMSPPPSGFGERSS
GGSGGGPLSHFYSGSPTSYFTSGLQAGLKQSHLSKAIGSSPLGSGEGLLGLSPGPNGH
SHLLKTPLGGQKRSFAHLLPSPEPSPEGSYVGQHSQGLGGHYADSYLKRKRIF"
BASE COUNT 505 a 1080 c 800 g 558 t
ORIGIN
1 ccacgcgtcc gaagaaggac tcggctgccc gtgccaagtc ggacctgctg ggcaagccgc
61 tgggaccacg caccctctac gtgcactgga cggatgccgg gcaactgacg cctgcccttc
121 tccactcccg ctgcctctgt gtggaccgcc tgccacctgg cttcaacgat gtggacgctc
181 tgtgccgggc gctgtcagct gtccacagcc ccaccttctg ccagctggcg tgcggccagg
241 atgggcagct gaagggcttc gcggtgctgg agtatgagac ggctgagatg gcggaggagg
301 cacagcagca ggcggacggc ctgtccctgg ggggcagcca cctgcgagtc tccttctgcg
361 cccctgggcc ccccggccgc agtatgctgg ccgctctcat cgctgcccag gccacggccc
421 tcaatcgggg gaagggactc ctccccgagc ccaacatcct gcagctgctc aacaacctgg
481 gcccatccgc gtccctccag ctgctgctca accccctgct ccatggcagt gcggggggga
541 agcagggcct cctgggtgcc cccccagcca tgccgctgct caatgggcca gccctgtcca
601 cggcgctgtt gcagctcgcc ctgcagaccc agggccagaa gaagcccggc atcctgggag
661 actcacccct gggcgccctc cagcctgggg cccagccagc caaccccctc ctcggggagc
721 tgcctgcagg agggggcctg cccccggagc tgccgccccg gcgagggaag ccaccacccc
781 tgctgccatc cgtgcttggc cctgctgggg gtgaccggga ggccctgggc ttgggtcccc
841 cagcggccca gctcactcct ccccccgccc ctgtggggct ccgaggctct ggcctcagag
901 gcctccagaa agacagtggg cctctgccga cgccccctgg ggtctcactg ctgggggagc
961 cccccaagga ctaccggatt cccctgaatc cctacctgaa cctacacagc ctgctcccgg
1021 ccagcaacct ggcgggtaag gaggcccggg gctggggagg cgccgggaga agccgccgcc
1081 cagctgaggg ccccctaact aaccccccag cccctggagg tggcagcagc agcagcaaag
1141 ccttccagct caagtcccgc ctgctcagcc ccctcagcag cgcccgcctg ccccccgaac
1201 caggactgtc tgacagctac agcttcgact acccctcgga catgggacct cggcggctct
1261 tctcccaccc acgggaacca gcccttgggc ctcacggacc cagccgacac aagatgtccc
1321 ccccgcccag tggcttcggc gaacggagca gcggtgggag tggcgggggc cccctgtctc
1381 acttctattc aggctcgccc acttcctact tcaccagcgg cctgcaggct ggcctcaagc
1441 agagccacct cagtaaggca atcggctctt ccccgctggg gtccggagaa gggctcctgg
1501 gcctcagccc cgggcctaat ggtcacagcc acctgctgaa gaccccactg ggcggccaga
1561 aacgcagctt tgcccacctg ctgccctcgc ccgagcccag cccagaaggc agctatgtgg
1621 gccagcactc ccagggcctc ggcggccact acgcggactc ctacctgaag cggaagagga
1681 ttttctaagt ggctggcacc agagataact caagggcctg caccaaatcg cttttgggtt
1741 ttctgatgtt ttgttttgtg ttttttttaa accattttct ctctttcggt aatagaaaaa
1801 tctctgaaag actttactga ccaatcagcc ggagccccag gagcccaagg ggtgtggggg
1861 agtctggagg cctcattatg tctctggctt gctccccacg ctgaaaccct gcagccttaa
1921 gagagagggg ccccggcctg ctctccctcc ctccccccat ctcctcctcc gctgtgcccg
1981 tctctccgga gccctcctgc ctcattgctc ctgtaatttt ggcctttcga gtgccttgga
2041 ggtttccctg acctcccgtg aagatacaga gactgtctcc ttttttttta actttgacaa
2101 ctgacttctg tttccttttc taagttttat ttttcaaacc accccggaca gcccccagct
2161 ctgattcctt caaggcccgg cctgtccggg ccaccattcc acaccttgcg gtttgaaaca
2221 gctgtttttc ccacatttgc tgcaggcatg gctgtctcct gcccctgcct gcccatctgg
2281 cctatacccc agccgtgggg cccggggtcc ctgccgcagc cccctcccct tctgatgcct
2341 taaaagctgg gccccaggcc ctgctggcca gagccacaga tgccaagctc tgggagcttg
2401 actatggacc aaacagctct ggcctaggga ttgggccacc ctacccagga tctccaccct
2461 ggggacagta gaaggggaaa gccttcatct tggcgaaccg gccccaccac cccctcctac
2521 ccgggcctcc gtgcagagat gggctttctc tgccagtccc ctgctgtctg tctgtgggag
2581 tcggacattg tgcccatctc ccggagcctc tgctgtcact cgcttgttga agatgaattc
2641 ttgaattctg cctgcccacc cccggccaga tccctggagc tggcctcctt ccagcccagt
2701 gccagaaacc agcactccat gaagataaac tctgggcccg cccaccagca ggacctgtcg
2761 acctgaggtg accctgggcc ttgcccccag ccaactgggc caccagcttc cctcccttga
2821 ctctgggggt ccacatccac tccaagggga ctattccccc gaccccaccc cagtctcccc
2881 acacggacct ttgctgaatt aaagtttgta agtaaatggt tttaaagaaa aaaaaaaaaa
2941 aaa
//