LOCUS BC037341 2520 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4, mRNA (cDNA clone MGC:43305 IMAGE:5265475), complete cds. ACCESSION BC037341 VERSION BC037341.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2520) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2520) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC037341.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 73 Row: l Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38348337. FEATURES Location/Qualifiers source 1..2520 /db_xref="H-InvDB:HIT000051907" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:43305 IMAGE:5265475" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2520 /gene="GALNTL4" /gene_synonym="GalNAc-T15" /gene_synonym="GALNT15" /gene_synonym="GALNT18" /gene_synonym="MGC71806" /db_xref="GeneID:374378" /db_xref="HGNC:HGNC:30488" CDS 411..2234 /gene="GALNTL4" /gene_synonym="GalNAc-T15" /gene_synonym="GALNT15" /gene_synonym="GALNT18" /gene_synonym="MGC71806" /codon_start=1 /product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4" /protein_id="AAH37341.3" /db_xref="GeneID:374378" /db_xref="HGNC:HGNC:30488" /translation="MVCTRKTKTLVSTCVILSGMTNIICLLYVGWVTNYIASVYVRGQ EPAPDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWG QELSPEGRRVALKQFQYYGYNAYLSDRLPLDRPLPDLRPSGCRNLSFPDSLPEVSIVF IFVNEALSVLLRSIHSAMERTPPHLLKEIILVDDNSSNEELKEKLTEYVDKVNSQKPG FIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRII SPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALIGCF IVDRQYFQEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTE DLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTF RWYLVSVYPEMRMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIMYICHGMTPQNVYY TSSQQIHVGILSPTVDDDDNRCLVDVNSRPRLIECSYAKAKRMKLHWQFSQGGPIQNR KSKRCLELQENSDLEFGFQLVLQKCSGQHWSITNVLRSLAS" BASE COUNT 592 a 675 c 756 g 497 t ORIGIN 1 ggttctccta gcagcgcggg ccggtcggac cgccaaggca gccggcgctg gcgatgggaa 61 gcggcgtggc cgccgacaca ggcagtggca aagtttccca gacgtacaca tctggacgcg 121 cggctgccgg ctacccgtga cccctctagg aagggttcag ggatttttaa tttggaaaaa 181 aatccacctg gtttcctttg tcaaggtctc tccgggtggc cagcggcagg agctgcaaac 241 ttgggcacgg cggctacacc ggcagcggac cgggctttgg aggacctcgg gactcaggtg 301 ctgaggtgcc cagcggctcc ggacgtgcta cggggtgcga gcgcggggga gttcggggcg 361 cacgacaagg aagggccccc gggagctcta tatggaggaa ggagcccaga atggtgtgca 421 ccaggaagac caaaactttg gtgtccactt gcgtgatcct gagcggcatg actaacatca 481 tctgcctgct ctacgtgggc tgggtcacca actacatcgc cagcgtgtat gtgcgggggc 541 aggagccggc gcccgacaag aagctggagg aagacaaagg ggacactctg aagattattg 601 agcggctgga ccacctggag aatgtcatca agcagcacat tcaagaggct cctgccaagc 661 ctgaggaggc agaggccgag cccttcacag actcctctct gtttgcacac tggggccagg 721 agctcagccc cgaaggccgg cgcgtggccc tgaagcaatt ccagtactac ggctacaacg 781 cctacctcag cgaccgcctg cccctggacc ggcccctgcc tgacctcaga cccagtgggt 841 gccgtaacct ctcatttcct gacagcctgc cagaggtgag catcgtgttc atcttcgtca 901 atgaagcgct ttcagtgctg ctgcgctcca tccactcggc catggaacgc acgcccccac 961 atctgctcaa ggagatcatt ctggtggatg acaacagcag taacgaggaa ctgaaggaga 1021 agctgaccga atatgtggac aaggtgaaca gccagaagcc aggcttcatc aaagtcgtgc 1081 gtcacagcaa gcaggaaggc ctcatccgct ccagggtcag tggctggagg gcggccactg 1141 cccctgtggt ggcactcttt gatgcccacg tggagttcaa tgtgggctgg gctgaacctg 1201 tactcacccg catcaaggag aaccggaagc ggatcatctc gccatccttt gataacatca 1261 aatatgacaa ctttgagata gaagagtacc cgctggctgc ccagggcttt gactgggagc 1321 tgtggtgccg ctacctaaat ccccccaagg cctggtggaa gctggagaac tccacagcgc 1381 caatcaggag ccctgccctc attggctgct tcattgtgga ccggcagtac ttccaggaga 1441 tcggcctgct ggacgaaggc atggaagtct acgggggcga gaatgtggag cttgggatca 1501 gggtgtggca gtgtggcggg agtgtggagg tcctgccctg ctcacggatt gcccacattg 1561 agcgagccca caagccctac acagaggacc tcaccgccca tgtccgcagg aacgctctca 1621 gggtggctga agtctggatg gatgaattta aaagccacgt ctacatggca tggaacatac 1681 cgcaggagga ctcaggaatt gacattgggg acatcactgc aaggaaggct ctcaggaaac 1741 agctgcagtg caagaccttc cggtggtacc tggtcagcgt gtacccagag atgaggatgt 1801 actccgacat cattgcctat ggagtgctgc agaattctct gaagactgat ttgtgtcttg 1861 accaggggcc agatacagag aatgtcccca tcatgtacat ctgccatggg atgacgcctc 1921 agaacgtgta ctacacgagc agtcagcaga tccatgtggg cattctgagc cccaccgtgg 1981 atgatgatga caaccgatgc ctggtggacg tcaacagccg gccccggctc atcgaatgca 2041 gctacgccaa agccaagagg atgaagcttc actggcagtt ctctcaggga ggacccatcc 2101 agaaccgcaa gtctaagcgc tgtctggagc tgcaggagaa tagcgacctg gagttcggct 2161 tccagctggt gttgcagaag tgctcgggcc agcactggag catcaccaac gtcctgagga 2221 gcctggcgtc ctgacccacc ggggccactt ccggctgcct ctttgctact gtgtagcacc 2281 tgctgcaacg ttgcctgctg tccacgtggg gttgtttgga gtctggggaa ccaggttagt 2341 gggcccccaa gaagagcttt ttatttccta ttcaattttc atggagttta tagaaagatg 2401 ctgattggta ggtgatggta tgatatcaaa ctattttgca gttgtaaata ggggacagat 2461 ggaaaatatt tataactgac aataaaatat tattaagaaa agggaaaaaa aaaaaaaaaa //