LOCUS BC037329 4214 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens tetratricopeptide repeat, ankyrin repeat and
coiled-coil containing 1, mRNA (cDNA clone IMAGE:5263564), complete
cds.
ACCESSION BC037329
VERSION BC037329.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57164404
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..4214
/db_xref="H-InvDB:HIT000094802"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5263564"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4214
/gene="TANC1"
/gene_synonym="KIAA1728"
/gene_synonym="ROLSB"
/gene_synonym="TANC"
/db_xref="GeneID:85461"
/db_xref="HGNC:HGNC:29364"
/db_xref="IMGT/GENE-DB:29364"
/db_xref="MIM:29364"
CDS 592..1980
/gene="TANC1"
/gene_synonym="KIAA1728"
/gene_synonym="ROLSB"
/gene_synonym="TANC"
/codon_start=1
/product="TANC1 protein"
/protein_id="AAH37329.1"
/db_xref="GeneID:85461"
/db_xref="HGNC:HGNC:29364"
/db_xref="IMGT/GENE-DB:29364"
/db_xref="MIM:29364"
/translation="MPFREVAKPTEPDEHATITSSSENDDRSGSSLEWNKDGSLRLGV
QKGVLHDRRADNCSPVAEEETTGSAESTLPKAESSAGDGPVPYSQGSSSLIMPRPNSV
AATSSTKLEDLSYLDGQRNAPLRTSIRLPWHNTAGGRAQEVKARFAPYKPQDILLKPL
LFEVQSITTDSVFVGRDWLFHQIEENLRNTELAENRGAVVVGNVGFGKTAIISKLVAL
SCHGSRMRQIASNSPGSSPKTSDPTQDLHFTPLLSPSSSTSASSTAKTPLGSISAENQ
RPREDAVKYLASKVVAYHYCQADNTYTCLVPEFVHSIAALLCRSNQLAAYRDLLIKEP
QLQSMLSLRSCVQDPVAAFKRGVLEPLTNLRNEQKIPEEEYIILIDGLNEAEFHKPDY
GDTLSSFITKIISKFPAWLKLIVTVRANFQEIISALPFVKLSLDDFPDNKDIHSDLHA
SIQQHKDVKFNQ"
BASE COUNT 1265 a 866 c 935 g 1148 t
ORIGIN
1 agcggggctt tgctgtggca gctgctggag cggcggccgc ctcgggagcc ggaggagagg
61 cagccgcgga gcgccgagct ggcctcgccc cgaggcccgg ccctgggtgt ggggaaccgc
121 gctgaggagc tggaaacttt cccggcagga gctgactgct gggcaggaac gtctctcagg
181 agaaagagtg gaagagaaaa ttgtgaacta aggccccctg cccccttttc ctggtgcatg
241 tgaagttatc aaaaacagaa acaagtgttg aaaatgttaa aggctgtgct gaagaagagc
301 cgagagggag gaaagggagg caagaaggaa gcaggaagtg actttggtcc agagacttct
361 ccagtcctgc accttgacca cagtgctgac tctcctgtga gcagtcttcc cacagcagag
421 gacacctata gggtgagctt ggccaaaggt gtctcgatgt ctctgccttc ctcacctttg
481 ctgcctcgac agtctcactt ggtgcaatca agagtgaaca aaaaatcccc aggtcccgtc
541 aggaagccca agtatgtgga aagccccaga gtgcctggag atgcagttat aatgccattc
601 agagaagtag ccaagccaac agagcctgat gagcatgcca caattacaag ttcatccgaa
661 aatgatgacc ggagtggctc cagtttggaa tggaataaag atggaagcct aagattaggg
721 gttcagaagg gagtgcttca tgaccgcagg gcagataact gctccccagt ggcagaagag
781 gagaccaccg ggtcagcaga gagcacgctg cccaaagcag aatcctcagc tggagatggt
841 ccagtccctt attctcaggg ctccagctca ctaataatgc cacggcccaa ctcagttgca
901 gcaacaagct caaccaaatt ggaagatctg agttatttag acgggcagag aaatgctcct
961 ctacggacgt caattagatt accatggcac aatacggccg gaggtagggc acaggaagtt
1021 aaagcacgat ttgctcccta caagccacaa gacattttgt tgaaaccctt gttgtttgaa
1081 gtacaaagca taacaacaga ctctgtgttt gtgggaaggg attggctctt tcaccagata
1141 gaagaaaact tgaggaacac agaactggca gaaaacagag gcgcggtggt ggttggcaat
1201 gtgggatttg ggaagacggc aatcatttcc aagttggtgg ccctgagctg ccacggaagc
1261 cgcatgaggc agattgcttc caacagcccg ggttcatcac ctaaaacctc tgaccccact
1321 caggatcttc atttcactcc gttgctttca ccgagttctt ccacaagtgc ttccagcaca
1381 gctaaaacac ctcttgggtc tatcagtgct gaaaaccaga gaccaagaga ggatgcagtg
1441 aaatatcttg cttctaaggt ggtggcctac cactactgcc aggctgacaa cacgtacact
1501 tgcctggtgc ccgagtttgt gcacagcatc gcagctttgc tctgccggtc caatcagctg
1561 gccgcctaca gagaccttct gataaaggag ccccaactac agagcatgct gagcctccga
1621 tcctgtgtgc aggacccggt ggcagctttc aagaggggag tgctggagcc actcacaaac
1681 ctgagaaatg agcagaaaat tcctgaagaa gaatacatta ttttgataga tggcttaaat
1741 gaagctgagt ttcataaacc tgattatgga gatacgcttt cttcgtttat taccaaaatt
1801 atttctaaat ttcctgcctg gttgaagttg attgtgactg taagagcaaa ttttcaggaa
1861 atcataagtg cgctgccatt tgtcaagctt tccttagatg acttcccaga caacaaagac
1921 atccacagtg acctgcacgc ctccatccag cagcataaag atgtcaagtt caaccagtag
1981 tttgacttcg agcagcagtt tttcagatgg cttcaaggtc caaggaccag atactagaat
2041 taaagacaag gttgtaaccc acgttcagag cggtacagct gagcacagac cccgcaacac
2101 gccgttcatg ggcatcatgg ataagactgc gaggttccaa cagcagagca atcctccaag
2161 ccgcagctgg cactgtccgg caccagaggg gctgctgaca aacacgtctt ctgcagctgg
2221 cctgcagtct gctaacactg agaagccctc tctcatgcaa gtgggaggat ataataacca
2281 agccaaaacc tgttctgttt ctaccctgag tgcaagtgtc cacaatgggg cacaagtgaa
2341 ggagctagaa gaaagcaagt gccaaattcc agtccactct caagagaaca ggataactaa
2401 gactgtttct catctgtacc aggaaagtat ctccaaacag cagcctcata ttagtaatga
2461 agcccacagg agccacctca ctgcaaccaa accaaagcga tcatttatag agtcaaatgt
2521 gtgaacctta agaaatcccc atttgtggaa tttggaaacg tgtgttgact cctggtggta
2581 aattaaatag tttttttcat cagaaaaatt attttttagc catttttttt ctttggggtg
2641 gatctgatgc cattgatata tctaaaatgt gggataaaac ttctttaata gctagaaatc
2701 accataaata agaatgctaa acagaattga aaattatatc aacttaaaat tttaagacag
2761 cccagaagac attaatgact ctcacttatg aaattgtttg gcttttgcca ctttcttcct
2821 tgcctttgct atatggtaga atcacagaac ttacttagag aataaatatg tctattgttc
2881 aaaagtaaca ggtttaactc atgaccaagt gatgtacatc caagtgatgt attctggaaa
2941 cgatggaatt ttacagttac agttccattg agtcaaatcc cattttatat atacataaaa
3001 attaagttct gagtgagttc tagctaaata taagtgcgac tgtaaacgca gccaattttt
3061 ttaagcagaa tatgagaaca cctaagtatt ctcttcatag cagttcctat aaagggatta
3121 aacacttatt tctgtgttat ggttcttatt catatatttt tatagcactt ttggaaccta
3181 tatttgtgct tgaaggtgtt tttgatattt ggaaacagta taagccattt ggagtcatga
3241 ttggtggtca agtggattca agctaaaata ctaagaccag cattcttagt ggcgcttata
3301 aattagctct cacctggttt ccaaactgct tttaacaatg gtagtgctcc tggaacaatc
3361 cttccaagct cctctaagga caatatttaa ttcagatact aaaggtaaga ctggttgtta
3421 cttttgtttt gttgtacaat tagtacttta tagtcacatg ttgtatatat taaatagccc
3481 agttttattc agacttgtaa atagaactat ttcaatgtag ttaatctaaa aacaaaaaag
3541 aaaaccccag tcacgatttg catgttctct gtaagcttca tccatgctgg ttattgcact
3601 gaatgatata ttattagggc atgttaacag tataccagta acagcacttt atctcattta
3661 tatgaacacc tttgaggtgc tacttaagtc caagctctga tatattattc atttgtaaag
3721 ataaggtaca ggaatgaacc ttggtttaaa ggtattttta tatgaaaatg gtgtgttatt
3781 ggaagatgtt aaaatgctaa tttttgagaa gtaggagtgt atctgtttta tatgttggga
3841 tgtgaaattt attttctaaa attgaggaga aggaagttat atatttgcag aatgttttaa
3901 agtgaattgt tgtaatgaag ttcctgtgaa catcattatg gttttgtaca aataggaacc
3961 tctgatgtca ttcttcaacg tttgttcctg tgtgtacaat tgtactttgt atgaacagct
4021 ttatcatttt tataggcttt ccatgagttt tgctgtaact actatggctt atttattttc
4081 tttaatattt gtgaaagtct tactcctttg ttagttttgt ttctgcacaa ctactgtact
4141 tttccatatg gaataaagac tattaataga aaaaaaaaaa aaaaaaaaaa aaaaaaaaga
4201 aaaaaaaaaa aaaa
//