LOCUS BC037308 2241 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens YY1 transcription factor, mRNA (cDNA clone MGC:41844
IMAGE:5261384), complete cds.
ACCESSION BC037308
VERSION BC037308.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2241)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2241)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: e Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21464104.
FEATURES Location/Qualifiers
source 1..2241
/db_xref="H-InvDB:HIT000051902"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41844 IMAGE:5261384"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2241
/gene="YY1"
/gene_synonym="DELTA"
/gene_synonym="NF-E1"
/gene_synonym="UCRBP"
/gene_synonym="YIN-YANG-1"
/db_xref="GeneID:7528"
/db_xref="HGNC:HGNC:12856"
/db_xref="MIM:600013"
CDS 113..1357
/gene="YY1"
/gene_synonym="DELTA"
/gene_synonym="NF-E1"
/gene_synonym="UCRBP"
/gene_synonym="YIN-YANG-1"
/codon_start=1
/product="YY1 transcription factor"
/protein_id="AAH37308.1"
/db_xref="GeneID:7528"
/db_xref="HGNC:HGNC:12856"
/db_xref="MIM:600013"
/translation="MASGDTLYIATDGSEMPAEIVELHEIEVETIPVETIETTVVGEE
EEEDDDDEDGGGGDHGGGGGHGHAGHHHHHHHHHHHPPMIALQPLVTDDPTQVHHHQE
VILVQTREEVVGGDDSDGLRAEDGFEDQILIPVPAPAGGDDDYIEQTLVTVAAAGKSG
GGGSSSSGGGRVKKGGGKKSGKKSYLSGGAGAAGGGGADPGNKKWEQKQVQIKTLEGE
FSVTMWSSDEKKDIDHETVVEEQIIGENSPPDYSEYMTGKKLPPGGIPGIDLSDPKQL
AEFARMKPRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAF
VESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNK
KFAQSTNLKSHILTHAKAKNNQ"
BASE COUNT 629 a 530 c 565 g 517 t
ORIGIN
1 agcggggctt cctccctctg ccttccttcc ccacggccgg ccgcctcctc gcccgcccgc
61 ccgcagccga ggagccgagg ccgccgcggc cgtggcggcg gagccctcag ccatggcctc
121 gggcgacacc ctctacatcg ccacggacgg ctcggagatg ccggccgaga tcgtggagct
181 gcacgagatc gaggtggaga ccatcccggt ggagaccatc gagaccacag tggtgggcga
241 ggaggaggag gaggacgacg acgacgagga cggcggcggt ggcgaccacg gcggcggggg
301 cggccacggg cacgccggcc accaccacca ccaccatcac caccaccacc acccgcccat
361 gatcgctctg cagccgctgg tcaccgacga cccgacccag gtgcaccacc accaggaggt
421 gatcctggtg cagacgcgcg aggaggtggt gggcggcgac gactcggacg ggctgcgcgc
481 cgaggacggc ttcgaggatc agattctcat cccggtgccc gcgccggccg gcggcgacga
541 cgactacatt gaacaaacgc tggtcaccgt ggcggcggcc ggcaagagcg gcggcggcgg
601 ctcgtcgtcg tcgggaggcg gccgcgtcaa gaagggcggc ggcaagaaga gcggcaagaa
661 gagttacctc agcggcgggg ccggcgcggc gggcggcggc ggcgccgacc cgggcaacaa
721 gaagtgggag cagaagcagg tgcagatcaa gaccctggag ggcgagttct cggtcaccat
781 gtggtcctca gatgaaaaaa aagatattga ccatgagaca gtggttgaag aacagatcat
841 tggagagaac tcacctcctg attattcaga atatatgaca ggaaagaaac ttcctcctgg
901 aggaatacct ggcattgacc tctcagatcc caaacaactg gcagaatttg ctagaatgaa
961 gccaagaaaa attaaagaag atgatgctcc aagaacaata gcttgccctc ataaaggctg
1021 cacaaagatg ttcagggata actcggccat gagaaaacat ctgcacaccc acggtcccag
1081 agtccacgtc tgtgcagaat gtggcaaagc ttttgttgag agttcaaaac taaaacgaca
1141 ccaactggtt catactggag agaagccctt tcagtgcacg ttcgaaggct gtgggaaacg
1201 cttttcactg gacttcaatt tgcgcacaca tgtgcgaatc cataccggag acaggcccta
1261 tgtgtgcccc ttcgatggtt gtaataagaa gtttgctcag tcaactaacc tgaaatctca
1321 catcttaaca catgctaagg ccaaaaacaa ccagtgaaaa gaagagagaa gacccttctc
1381 gaccacggga agcatcttcc agaagtgtga ttgggaataa atatgcctct cctttgtata
1441 ttatttctag gaagaatttt aaaaatgaat cctacacacc taagggacat gttttgataa
1501 agtagtaaaa attaaaaaaa aaaaacttta ctaagatgac attgctaaga tgctctatct
1561 tgctctgtaa tctcgtttca aaaacacagt gtttttgtaa agtgtggtcc caacaggagg
1621 acaattcatg aacttcgcat caaaagacaa ttctttatac aacagtgcta aaaatgggac
1681 ttcttttcac attcttataa atatgaagct cacctgttgc ttacaatttt tttaattttg
1741 tattttccaa gtgtgcatat tgtacacttt tttggggata tgcttagtaa tgctacgtgt
1801 gatttttctg gaggttgata actttgcttg cagtagattt tctttaaaag aatgggcagt
1861 tacatgcata cttcaaaagt attttcctgt aaaaaaaaaa aaagttatat aggttttgtt
1921 tgctatctta attttggttg tattctttga tgttaacaca ttttgtataa ttgtatcgta
1981 tagctgtatt gaatcatgta gtatcaaata ttagatgtga tttaatagtg ttaatcaatt
2041 taaacccatt ttagtcactt tttttttcca aaaaaatact gccagatgct gatgttcagt
2101 gtaatttctt tgcctgttca gttacagaaa gtggtgctca gttgtagaat gtattgtacc
2161 ttttaacacc tgatgtgtac atcccatgta acagaaaggg caacaataaa atagcaatcc
2221 taaagcaaaa aaaaaaaaaa a
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