LOCUS BC037303 5083 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens protein kinase, AMP-activated, alpha 1 catalytic subunit, mRNA (cDNA clone MGC:33776 IMAGE:5265054), complete cds. ACCESSION BC037303 VERSION BC037303.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5083) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5083) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC037303.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: i Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47458812. FEATURES Location/Qualifiers source 1..5083 /db_xref="H-InvDB:HIT000051900" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33776 IMAGE:5265054" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..5083 /gene="PRKAA1" /gene_synonym="1" /gene_synonym="alpha" /gene_synonym="AMPK" /gene_synonym="AMPKa1" /gene_synonym="MGC33776" /gene_synonym="MGC57364" /db_xref="GeneID:5562" /db_xref="HGNC:HGNC:9376" /db_xref="MIM:602739" CDS 16..1668 /gene="PRKAA1" /gene_synonym="1" /gene_synonym="alpha" /gene_synonym="AMPK" /gene_synonym="AMPKa1" /gene_synonym="MGC33776" /gene_synonym="MGC57364" /codon_start=1 /product="PRKAA1 protein" /protein_id="AAH37303.1" /db_xref="GeneID:5562" /db_xref="HGNC:HGNC:9376" /db_xref="MIM:602739" /translation="MATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKV AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGE LFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF GLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD DHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPK YLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRR IMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQG VRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTYSKMS LQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSVSNYRSCQRSDSDAEAQGKSS EVSLTSSVTSLDSSPVDLTPRPGSHTIEFFEMCANLIKILAQ" BASE COUNT 1572 a 870 c 913 g 1728 t ORIGIN 1 agttcctgga gaaagatggc gacagccgag aagcagaaac acgacgggcg ggtgaagatc 61 ggccactaca ttctgggtga cacgctgggg gtcggcacct tcggcaaagt gaaggttggc 121 aaacatgaat tgactgggca taaagtagct gtgaagatac tcaatcgaca gaagattcgg 181 agccttgatg tggtaggaaa aatccgcaga gaaattcaga acctcaagct tttcaggcat 241 cctcatataa ttaaactgta ccaggtcatc agtacaccat ctgatatttt catggtgatg 301 gaatatgtct caggaggaga gctatttgat tatatctgta agaatggaag gctggatgaa 361 aaagaaagtc ggcgtctgtt ccaacagatc ctttctggtg tggattattg tcacaggcat 421 atggtggtcc atagagattt gaaacctgaa aatgtcctgc ttgatgcaca catgaatgca 481 aagatagctg attttggtct ttcaaacatg atgtcagatg gtgaattttt aagaacaagt 541 tgtggctcac ccaactatgc tgcaccagaa gtaatttcag gaagattgta tgcaggccca 601 gaggtagata tatggagcag tggggttatt ctctatgctt tattatgtgg aacccttcca 661 tttgatgatg accatgtgcc aactcttttt aagaagatat gtgatgggat cttctatacc 721 cctcaatatt taaatccttc tgtgattagc cttttgaaac atatgctgca ggtggatccc 781 atgaagaggg ccacaatcaa agatatcagg gaacatgaat ggtttaaaca ggaccttcca 841 aaatatctct ttcctgagga tccatcatat agttcaacca tgattgatga tgaagcctta 901 aaagaagtat gtgaaaagtt tgagtgctca gaagaggaag ttctcagctg tctttacaac 961 agaaatcacc aggatccttt ggcagttgcc taccatctca taatagataa caggagaata 1021 atgaatgaag ccaaagattt ctatttggcg acaagcccac ctgattcttt tcttgatgat 1081 catcacctga ctcggcccca tcctgaaaga gtaccattct tggttgctga aacaccaagg 1141 gcacgccata cccttgatga attaaatcca cagaaatcca aacaccaagg tgtaaggaaa 1201 gcaaaatggc atttaggaat tagaagtcaa agtcgaccaa atgatattat ggcagaagta 1261 tgtagagcaa tcaaacaatt ggattatgaa tggaaggttg taaacccata ttatttgcgt 1321 gtacgaagga agaatcctgt gacaagcact tactccaaaa tgagtctaca gttataccaa 1381 gtggatagta gaacttatct actggatttc cgtagtattg atgatgaaat tacagaagcc 1441 aaatcaggga ctgctactcc acagagatcg ggatcagtta gcaactatcg atcttgccaa 1501 aggagtgatt cagatgctga ggctcaagga aaatcctcag aagtttctct tacctcatct 1561 gtgacctcac ttgactcttc tcctgttgac ctaactccaa gacctggaag tcacacaata 1621 gaattttttg agatgtgtgc aaatctaatt aaaattcttg cacaataaac agaaaacttt 1681 gcttatttct tttgcagcaa taagcatgca taataagtca cagccaaatg cttccatttg 1741 taatcaagtt atacataatt ataaccgagg gctggcgttt tggaatgcaa tttgcacagg 1801 gattggaaca tgatttatag ttaaaagcct aatatgcaga aatgaattaa gatcattttg 1861 ttgttcattg tgcagtatgt atatagcata atatacacag tgaattatag gtctcaggct 1921 tacttgattt ttggctattt tatatttagt gtacacaggg ctttgaaata ttaatttaca 1981 taaaggcctt catatattat tacgtgttat atattacgtg ttataaattt attcaataaa 2041 tatttgccta gaattcccaa gacctttata ggtgattttg ttttctgggc tccttaactt 2101 cataaatagc tagtatcttc cagcagtagt aacagtctgg ataacttctt ccatatccct 2161 ccctctttgt ttttttgaga cagtgtcact ttgtcaccca ggctggagtg caatggtgtg 2221 gtctcggctc actgcaacct ccacctcccg ggttcgagtg attctcccgc ctcagcttcc 2281 tgagtagctg gaactacagg cgtgtgccac cacacccggc taatttttcg tatttttagt 2341 gtagacgggg tttcactatg ttgcccaggc tggtctcgaa ctcctgaccg cgtgatccac 2401 cacctcagct tcccaaagtg gtgggattac aggcgtgagc caccgcaccc ggcctccata 2461 tccccctttt aaaattctgt agtgtatggt aagtcatatc agatatcaga cctaatttaa 2521 atttcatttt agctttacaa gtccaaaaac acagaattta tatattcaga tactctagca 2581 ctaattttag tcttaaaata ttcccacgat attctgtaca caaaatgttc tttttgttac 2641 aagagctgag ttgcatatac tgtagataaa tcatattatt tttgccaatt tcacaaattc 2701 ctctggccca tcatgtcagt cattattgag tatatgcaca cattgctact tatttgatta 2761 tgtatctttt aaattgattc agtgcataga aaactatctc ttacaaactt taagtgctct 2821 gatatgactt cccccccaaa ttttattatg aacattttta aaaacagaaa aattgaaaaa 2881 ctgtttggta agcacatgta tatctaccat ttagattcag cagttgttaa tgttttgtca 2941 tttgttttct ctatacctat atatgtatag atacagctag ttatgcatat atatgcatat 3001 atgtgtttgt ttgtgtatgt atatatgctt ttttccccct gaaccatttg gatgttacag 3061 acatacttat caccgtgaaa atacttcaag tatctcctac agataatgac attctcctaa 3121 aaatccgtaa taccattgta aaagtaataa ttccccaata tcatctaatc aagccatatt 3181 taaatttctg aagttaactc caaatttctt tatagctgat tatttcaaac taggatccaa 3241 ttaaagttta catatgacac ttggttataa ctctttagtt ggatataaca ttattattat 3301 tttgataaaa tatggaacaa atcaattcta ttaataagtg gtcacatttg ttttgggctt 3361 aaattacttt ttaaagatac tggattttcc taagatttct gatttacact gatatttttt 3421 tttgtcattc ttaattgcat cacacaatag atgtaaatga agatgtagtc acctcagata 3481 aaattggtat cgtgtatgat aatattgtat catttatatt tgccttatgt taactttaag 3541 aaattgattt ttttgtatta atcattttcc cattgcaaca gagctatatt ttttctattt 3601 taagaatcat attttaggat tatttttggc aaatacagtg agcacttatg taaccagatg 3661 ataatgaact caaatgtcat gatagcttgc ataaatggtg actctagtag atttgactca 3721 agcacttcta gaatcatgca ctgaattcaa aggaaaaatc ttgctgcttt ttgtccaggg 3781 cttgttctat tcaacttcta atttgaaagc tgtacaaagt aatagaagtt ccatttaaat 3841 atgagttcaa aactgtattt actttttatg tggccctctc tttaggggat tctaatttta 3901 cttagggtct ctaagtgcag cataatgttc ctgatgttaa cagaagactg tatttttaaa 3961 gttacaaatt tgtatatgga attaagtaat ggcgctatat acgctgttgt ggggaggggg 4021 gaagaaaagg aggaaccaat taaataggac cttttaaaaa ttgttaattt tgtaaacttt 4081 gcttctctta taagttattg tgattcattt tagttactgt gttttatttt gaaaatattt 4141 aaatattgca cttctataaa tagtatgata aatgcacaga caattgcagt aaattctttt 4201 ttaagctagg atatttgaaa tgacaacctt tggttaagtg tgtcaaggtt gcaacagaat 4261 tttcacaatt tttttgttgt ttgcaaattg ttactaatat tgaagaggta agggaggcaa 4321 tgcaaatgat ttttaatctt tttttattat cttttcagca gtttatattt tttgtgactt 4381 tatgcaacca tatttttact ttgtcttgac aactgaaaga tgtataaggt tttttgccag 4441 aaatgtactg tatacatagt tttaagtata acagatttta ctgatatgta aaaattttgc 4501 cattaaaata aatgatttct cactgagagg aacttttcta ccaggttggg gcatatggga 4561 gcttaatata tcatatctaa tttaaaataa tttcactgaa ataaactcca ttgcttttac 4621 ctaatttttt tcttgagatg cttttgtagt ttttcagagt tttagatgat tttatacaaa 4681 atcctctgcc tagcactgct ctttttgatg ttgtagtgac accatttaca ttgaattaat 4741 gcttggtagc ctggggctag atgtggaact ccatggatct gtgttctgac tggcaccttt 4801 ggaatgaaag aaaagtgtgt gctgtccaaa ttttttcccc ttaattcttt ccctcatctt 4861 ctcacccata atagaaattt tatttccatt gtgagttctg acaagaatga aattccacat 4921 acaacataac tgtaaattgt tggtaggtag aagttaatat ttgtggttca tgtatatttt 4981 gaccagagta tatttaagta tataatttca gcttccttga tttagaaata tgatataata 5041 aagaaaaact ccatttatca tctgttaaaa aaaaaaaaaa aaa //