LOCUS BC037242 1553 bp mRNA linear HUM 22-FEB-2007 DEFINITION Homo sapiens empty spiracles homeobox 1, mRNA (cDNA clone IMAGE:5198260), complete cds. ACCESSION BC037242 VERSION BC037242.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1553) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1553) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 50 Row: p Column: 18 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1553 /db_xref="H-InvDB:HIT000094760" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5198260" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1553 /gene="EMX1" /db_xref="GeneID:2016" /db_xref="HGNC:HGNC:3340" /db_xref="MIM:600034" CDS 759..1118 /gene="EMX1" /codon_start=1 /product="empty spiracles homeobox 1" /protein_id="AAH37242.1" /db_xref="GeneID:2016" /db_xref="HGNC:HGNC:3340" /db_xref="MIM:600034" /translation="MVASDVPQDGLLLHGPFARKPKRIRTAFSPSQLLRLERAFEKNH YVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKGSHHINRWR IATKQANGEDIDVTSND" BASE COUNT 309 a 493 c 488 g 263 t ORIGIN 1 ggaggcccaa cccagatctg cgcgcccagg cagcgctcag gccgctagaa tggaccccgg 61 cagcggcgag gaagcggaac tctctgcggc tccctctccg cagtgcgccg gcaaggtcca 121 ggtcccagcc tccccaccgc cgcccgcgcc ctcctaggcc tcggagcggc gcctttctgc 181 ggcctcgaag gtggggtggg aaagtttggg gagtcccggc tctcacagcc tgtcgtgaga 241 actgcccccg gggaattcgt ccgccgtacg gaaaaactgg ccggagcaga gtcgtccgcg 301 gttccgcggt cgcgggtgga aggtgaaggt cgagggaggt caggctgctt ctgcgtgtcc 361 tgacggctgg cgtgttctct tgagatgggc tcgggctact tggccagctt caatttaagc 421 cacagtgtct ccgaggccct gacctggtcc ggcccgccga cacttgagcc cccagagcct 481 cagagaaggc gagggggtgg atctcccagt gccgaggccc gccgtcctgg tccaagccgg 541 tcgcggcacc gtgtctgggc actggagctg cttccagccc cgcgaacagc tggagggtgg 601 cagtgggacc gctccggcgg cttctcccgc gcagtgcccc gcctggcccc ttgtgaaggg 661 agtgagcgtc ccctttccag agctgtcccc cgtgacatcc agaaaacgcg aaacctcagg 721 aacaaggtcg cagcttcaga ccgcggccca ggaggccgat ggtggccagc gacgtgcccc 781 aggacgggct gcttctgcac ggccccttcg cacgcaagcc caagcggatc cgcacggcct 841 tctcgccctc gcagctgctg cggctggagc gcgccttcga gaagaaccac tacgtggtgg 901 gcgccgagcg gaagcagctg gccggcagtc tcagcctctc cgagacgcag gtgaaggtgt 961 ggttccagaa ccggaggaca aagtacaaac ggcagaagct ggaggaggaa gggcctgagt 1021 ccgagcagaa gaagaagggc tcccatcaca tcaaccggtg gcgcattgcc acgaagcagg 1081 ccaatgggga ggacatcgat gtcacctcca atgactaggg tgggcaacca caaacccacg 1141 agggcagagt gctgcttgct gctggccagg cccctgcgtg ggcccaagct ggactctggc 1201 cactccctgg ccaggctttg gggaggcctg gagtcatggc cccacagggc ttgaagcccg 1261 gggccgccat tgacagaggg acaagcaatg ggctggctga ggcctgggac cacttggcct 1321 tctcctcgga gagcctgcct gcctgggcgg gcccgcccgc caccgcagcc tcccagctgc 1381 tctccgtgtc tccaatctcc cttttgtttt gatgcatttc tgttttaatt tattttccag 1441 gcaccactgt agtttagtga tccccagtgt cccccttccc tatgggaata ataaaagtct 1501 ctctcttaat gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //