LOCUS BC037168 3836 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens WD repeat domain 48, mRNA (cDNA clone MGC:29487
IMAGE:4843736), complete cds.
ACCESSION BC037168
VERSION BC037168.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3836)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3836)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC037168.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: g Column: 8.
FEATURES Location/Qualifiers
source 1..3836
/db_xref="H-InvDB:HIT000051858"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29487 IMAGE:4843736"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3836
/gene="WDR48"
/gene_synonym="KIAA1449"
/gene_synonym="P80"
/db_xref="GeneID:57599"
CDS 402..1910
/gene="WDR48"
/gene_synonym="KIAA1449"
/gene_synonym="P80"
/codon_start=1
/product="WDR48 protein"
/protein_id="AAH37168.1"
/db_xref="GeneID:57599"
/translation="MNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLN
RDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIY
CTDLRNPDIRVLICEEKAPVLKMELDRSADPPPAIWVATTKSTVNKWTLKGIHNFRAS
GDYDNDCTNPITPLCTQPDQVIKGGASIIQCHILNDKRHILTKDTNNNVAYWDVLKAC
KVEDLGKVDFEDEIKKRFKMVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFS
SPDGSDPKLNLGGLLLQALLEYWPRTHVNPMDEEENEVNHVNGEQENRVQKGNGYFQV
PPHTPVIFGEAGGRTLFRLLCRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPF
YLQPHASSGAKTLKKDRLSASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPGEQ
EKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHFIWKSGGDLTLHYRQKST"
BASE COUNT 1203 a 749 c 824 g 1060 t
ORIGIN
1 tgcaagatgg cggcccatca ccggcagaac acagcagggc ggaggaaagt gcaggtttcc
61 tatgttattc gagatgaagt ggagaagtac aaccgaaatg gagtcaatgc tctgcagctg
121 gatccagcac taaatagact tttcacagcc ggtcgagact ctatcataag aatatggagt
181 gtcaatcagc acaagcaaga tccatatata gcatctatgg aacaccatac tgattgggta
241 aacgacattg tactctgttg taatgggaaa acattaatat ctgcttcttc tgacacgaca
301 gtaaaagtat ggaatgcaca caagggattt tgcatgtcaa cattaaggac acataagctt
361 cttctttaag tggaaacaaa gattccattt atagcctggc catgaatcaa ctgggaacaa
421 tcattgtatc agggtccact gaaaaggtgt tacgggtatg ggatccaaga acatgtgcaa
481 aactaatgaa gcttaaaggg cacacggata atgtgaaggc attgctatta aacagagatg
541 gcacgcaatg cctgtcaggc agttctgatg ggacaattcg cctttggtcc cttggccagc
601 agagatgtat agcaacatac cgagtccatg atgaaggtgt ttgggcgctg caagtcaatg
661 atgccttcac acatgtgtat tctggtggaa gggacaggaa gatttattgt acagacctaa
721 gaaaccctga cattcgggtg ctaatttgtg aagaaaaagc accagttctc aagatggagc
781 ttgatagatc agctgatcct cctcctgcaa tttgggttgc aacaactaag tctacagtaa
841 ataaatggac tttgaaagga attcataatt ttagagcctc tggagattat gacaatgact
901 gtacaaatcc tataacacct ctttgtacac aacctgacca ggttattaaa gggggtgcta
961 gtattattca gtgccacatt cttaatgata agagacatat attaaccaaa gataccaata
1021 ataatgtggc atattgggat gtattgaagg catgtaaagt tgaagatctg ggcaaagtgg
1081 attttgaaga tgaaattaag aaaagattta aaatggtgta tgtgccaaat tggttctcag
1141 tagacttaaa aacagggatg ttaactatta ctttggatga aagtgattgt tttgctgcct
1201 gggtttctgc aaaagatgct ggtttcagca gccctgatgg gtcagatcca aaattgaatt
1261 taggaggact tttactccaa gcactcctgg aatattggcc tagaacacat gtgaatccaa
1321 tggatgaaga ggaaaatgaa gtaaaccatg taaatgggga gcaggagaac cgagtgcaga
1381 agggaaatgg atattttcaa gtgcccccac atacacccgt gatctttggt gaagctggag
1441 gtcgcacact gttcaggctg ctctgccgag attccggggg tgagactgag tctatgcttc
1501 ttaatgaaac agtgccacaa tgggtaattg acatcactgt ggataaaaat atgcccaaat
1561 tcaacaaaat tcctttctac ctccaacctc atgcatcttc aggagcaaaa accttaaaaa
1621 aagatagact ctctgctagt gacatgctcc aagtccgaaa agttatggaa catgtttatg
1681 aaaaaattat caacttggat aatgagtctc aaaccactag ctcttctaat aatgaaaaac
1741 caggagaaca ggaaaaagaa gaagatattg ctgtgttggc agaggagaaa attgaacttt
1801 tgtgccagga ccaggttttg gatccaaata tggaccttcg aacagtgaaa cacttcatat
1861 ggaagagcgg tggagacctc accctccatt accgtcagaa gtccacgtga aggctgggct
1921 aatgctcctg gatattcatt tacgaccttc ctctatggcc ccaagagtag tcctaggaag
1981 cccactgatc cccaacggga gcaagacttc taacggctga ttggtatgga ccgagattat
2041 ctttcaattg aagtgactaa tcgagatgta atatagaaac cagtctccat gtgtagatta
2101 agctgtcccc agggaagcag agtgcaagag cagaagagcc ccaagcagac tatgtctttc
2161 aagatgtaca gaagactgac aacaggccag tgcagacttt gcttcctcct tttgtttcaa
2221 aggaccttat ctacccatta acacttgtta gagacacctc agtcgggcca caactgtctc
2281 tgtttcaact ttaagcccac acactctgta gcttttctaa aacagtacat tccattcatg
2341 cagtagatat gaaggctttt tccaagtttg tcatataaag taatcaaatt gttttcaccg
2401 tttaagacag ttatttttaa tgggaatttg ctgttgcaca atttgagaac cagcccattt
2461 cataataaaa gattaatgtt gggcttgttg ttaatattgc atctcagatg tgttcttgta
2521 ggaagatctg ttgaaattcc aggtgctgga tcatagcact tggactgttg ggccggagtt
2581 tgtgcagcag tttcactcct tcctccactg tgtccagttt tatttacaca aagcgagctg
2641 agaccacagg ttcttgctct ggatgagcag catgacacca tcaaaattta agaccatgat
2701 gaaatttcag tttcattcaa atgttaccta aaatttatgg tgtcagaata aagggagatc
2761 atagtgagtt aatttgatat tcatatcctg gaagtataca tatttgtttt tccaaagttt
2821 tatatgcagg tttttgttgt acctgtatcc agatcttctt ttcactgttc taacaatcta
2881 acactttcat agaatcattt ggatcttgta tagagtgtaa cttattgggg ataaacactt
2941 caacttttgg cagaaaatac tttggattct ccccaaggtc atttgtattc agagtaaatc
3001 agtggtccac ccccataaaa ctgtaagaca agcctcctgt atgaagccag aagcacaagt
3061 gccttcagag ggcagttgat tccagtccag ttgcctccct agcttgtgtg tggcctgcct
3121 ccaccatagc agggactagg gagggaggca gggaacgttt tttcttttct acatcttcac
3181 aggttcggct gggggcagct gataggccta aggccatacc ttactattta agatactctg
3241 atcgcacaac tgcagagaca gggttccctc actgctagtc agcttctttt ggaaactgga
3301 caggccattg ccacctgcac tttgaagaag tgagcaaaga cgtggccaca tttctaataa
3361 gttgaaatgg tctttctccc ttcctcagag agcaaccagc ttcttttttt ttaaaagtcc
3421 tttctatctg ttggatacaa cagtgtgctt ttggtgcaca ttttttagca atagttgtga
3481 attaatggca aagaaaaaaa aaattattta ccagccctca gttgtgtttg cccgaggggc
3541 ctttgagcaa agaaatgggt tttgctgggt cattttgccc tgtgtgctaa gccttgggtg
3601 gctgcattcc cctcctgtca tagatctgac ccccagcatg attgtatttc tttcccctcc
3661 agtcaaaccg taatacagtt tccagaaaat tcgacagtct gcaatgccaa aagggtaaaa
3721 atctgtattt cacagttgta tagaataaag gctttagtta aaataaaaaa aaaaaaaaaa
3781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//