LOCUS BC036903 1818 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens SNHG3-RCC1 readthrough transcript, mRNA (cDNA clone MGC:46387 IMAGE:4536608), complete cds. ACCESSION BC036903 VERSION BC036903.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1818) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1818) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 78 Row: b Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 20149512. FEATURES Location/Qualifiers source 1..1818 /db_xref="H-InvDB:HIT000051842" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46387 IMAGE:4536608" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1818 /gene="SNHG3-RCC1" /db_xref="GeneID:751867" /db_xref="HGNC:HGNC:33536" CDS 297..1562 /gene="SNHG3-RCC1" /codon_start=1 /product="SNHG3-RCC1 readthrough transcript" /protein_id="AAH36903.1" /db_xref="GeneID:751867" /db_xref="HGNC:HGNC:33536" /translation="MSPKRIAKRRSPPADAIPKSKKVKVSHRSHSTEPGLVLTLGQGD VGQLGLGENVMERKKPALVSIPEDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRD TSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMK KSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPG TESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE KSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMM GKQLENRVVLSVSSGGQHTVLLVKDKEQS" BASE COUNT 441 a 437 c 552 g 388 t ORIGIN 1 ccacgcgtcc ggattcgcag tggtcgcttc ttctccttgg atttgttaag gattccaagt 61 aactcttatt tggagagaag acgatctgca cttcgcattt tggcattgac atttaatttt 121 agggtccttt atatagaagg gagactacat gaatgtgtaa gatcttggag gaagacagca 181 gagagagaga gagagatcag agatcccagg gttaaaagtt ggagaaattt cacagtacat 241 catccaaaag aggagtccat gatggaggca gaggtaaact tggagaggac aggaagatgt 301 cacccaagcg catagctaaa agaaggtccc ccccagcaga tgccatcccc aaaagcaaga 361 aggtgaaggt ctcacacagg tcccacagca cagaacccgg cttggtgctg acactaggcc 421 agggcgacgt gggccagctg gggctgggtg agaatgtgat ggagaggaag aagccggccc 481 tggtatccat tccggaggat gttgtgcagg ctgaggctgg gggcatgcac accgtgtgtc 541 taagcaaaag tggccaggtc tattccttcg gctgcaatga tgagggtgcc ctgggaaggg 601 acacatcagt ggagggctcg gagatggtcc ctgggaaagt ggagctgcaa gagaaggtgg 661 tacaggtgtc agcaggagac agtcacacag cagccctcac cgatgatggc cgtgtcttcc 721 tctggggctc cttccgggac aataacggtg tgattggact gttggagccc atgaagaaga 781 gcatggtgcc tgtgcaggtg cagctggatg tgcctgtggt aaaggtggcc tcaggaaacg 841 accacttggt gatgctgaca gctgatggtg acctctacac cttgggctgc ggggaacagg 901 gccagctagg ccgtgtgcct gagttatttg ccaaccgtgg tggccggcaa ggcctcgaac 961 gactcctggt ccccaagtgt gtgatgctga aatccagggg aagccggggc cacgtgagat 1021 tccaggatgc cttttgtggt gcctatttca cctttgccat ctcccatgag ggccacgtgt 1081 acggcttcgg cctctccaac taccatcagc ttggaactcc gggcacagaa tcttgcttca 1141 taccccagaa cctaacatcc ttcaagaatt ccaccaagtc ctgggtgggc ttctctggtg 1201 gccagcacca tacagtctgc atggattcgg aaggaaaagc atacagcctg ggccgggctg 1261 agtatgggcg gctgggcctt ggagagggtg ctgaggagaa gagcataccc accctcatct 1321 ccaggctgcc tgctgtctcc tcggtggctt gtggggcctc tgtggggtat gctgtgacca 1381 aggatggtcg tgttttcgcc tggggcatgg gcaccaacta ccagctgggc acagggcagg 1441 atgaggacgc ctggagccct gtggagatga tgggcaaaca gctggagaac cgtgtggtct 1501 tatctgtgtc cagcgggggc cagcatacag tcttattagt caaggacaaa gaacagagct 1561 gatgaagcct ctgagggcct ggcttctgtc ctgcacaacc tccctcacag aacagggaag 1621 cagtgacagc tgcagatggc agcgggcctc tccccagccc tgagcactgt gtcagttcct 1681 gccttttctc atcagcagaa cagaatcctt ttcctctttt ccttcctcct ctttggaatt 1741 ttcctgggac ctacagaata aaggggggga tggacagggg gttttcaaaa ggaaaaaaaa 1801 aaaaaaaaaa aaaaaaaa //