LOCUS BC036812 3000 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1, mRNA (cDNA clone MGC:46275 IMAGE:5734009), complete cds. ACCESSION BC036812 VERSION BC036812.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3000) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3000) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Invitrogen cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: j Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 71043691. FEATURES Location/Qualifiers source 1..3000 /db_xref="H-InvDB:HIT000094626" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:46275 IMAGE:5734009" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_124" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3000 /gene="GALNTL1" /gene_synonym="GALNT16" /db_xref="GeneID:57452" /db_xref="HGNC:HGNC:23233" CDS 79..1755 /gene="GALNTL1" /gene_synonym="GALNT16" /codon_start=1 /product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1" /protein_id="AAH36812.2" /db_xref="GeneID:57452" /db_xref="HGNC:HGNC:23233" /translation="MRKIRANAIAILTVAWILGTFYYLWQDNRAHAASSGGRGAQRAG RRSEQLREDRTIPLIVTGTPSKGFDEKAYLSAKQLKAGEDPYRQHAFNQLESDKLSPD RPIRDTRHYSCPSVSYSSDLPATSVIITFHNEARSTLLRTVKSVLNRTPANLIQEIIL VDDFSSDPEDCLLLTRIPKVKCLRNDRREGLIRSRVRGADVAAATVLTFLDSHCEVNT EWLPPMLQRVKEDHTRVVSPIIDVISLDNFAYLAASADLRGGFDWSLHFKWEQIPLEQ KMTRTDPTRPIRTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGS LEIVPCSRVGHVFRKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGK AFGSVATRIEQRKKMNCKSFRWYLENVYPELTVPVKEALPGIIKQGVNCLESQGQNTA GDFLLGMGICRGSAKNPQPAQAWLFSDHLIQQQGKCLAATSTLMSSPGSPVILQMCNP REGKQKWRRKGSFIQHSVSGLCLETKPAQLVTSKCQADAQAQQWQLLPHT" BASE COUNT 722 a 896 c 783 g 599 t ORIGIN 1 tggggctgcg agcgcccccg ccccggcccc gagagcacgc cggcccagtc ccccacctgg 61 ggcgcccgtc tgcccaccat gaggaagatc cgcgccaatg ccatcgccat cctgaccgta 121 gcctggatcc tgggcacttt ctactactta tggcaggaca accgagccca cgcagcatcc 181 tccggcggcc ggggcgcgca gagggcaggc aggaggtcgg agcagctccg cgaggaccgc 241 accatcccgc tcattgtgac aggaactccc tcgaaaggct ttgatgagaa ggcctacctg 301 tcggccaagc agctgaaggc tggagaggac ccctacagac agcacgcctt caaccagctg 361 gagagtgaca agctgagccc agaccggccc atccgggaca cccgccatta cagctgccca 421 tctgtgtcct actcctcgga cctgccagcc accagcgtca tcatcacctt ccacaatgag 481 gcccgttcca ccctgctgcg cacagtgaag agtgtcctga accgaactcc tgccaacttg 541 atccaggaga tcattttagt ggatgacttc agctcagatc cggaagactg tctactcctg 601 accaggatcc ccaaggtcaa gtgcctgcgc aatgatcggc gggaagggct gatccggtcc 661 cgagtgcgtg gggcggacgt ggctgcagct accgttctca cctttctgga tagccactgc 721 gaagtgaaca ccgagtggct gccgcccatg ctgcagcggg tgaaggagga ccacacccgc 781 gtggtgagtc ccatcattga tgtcatcagt ctggataatt ttgcctacct tgcagcatct 841 gctgaccttc gtggagggtt cgactggagc ctgcatttca agtgggagca gatccctctt 901 gagcagaaga tgacccggac agaccccacc aggcccataa ggacgcctgt catagctgga 961 ggaatcttcg tgatcgacaa gtcctggttt aaccacttgg gaaagtatga tgcccagatg 1021 gacatctggg ggggagagaa ttttgagctc tccttcaggg tgtggatgtg tggtggcagt 1081 ctggagatcg tcccctgcag ccgggtgggc catgtcttca ggaaacggca cccctacaac 1141 ttccctgagg gtaatgccct cacctacatc aggaatacta agcgcactgc agaagtgtgg 1201 atggatgaat acaagcaata ctactatgag gcccggccct cggccatcgg gaaggccttc 1261 ggcagtgtgg ctacgcggat agagcagagg aagaagatga actgcaagtc cttccgctgg 1321 tacctggaga acgtctaccc agagctcacg gtccccgtga aggaagcact ccccggcatc 1381 attaagcagg gggtgaactg cttagaatct cagggccaga acacagctgg tgacttcctg 1441 cttggaatgg ggatctgcag agggtctgcc aagaacccgc agcccgccca ggcatggctg 1501 ttcagtgacc acctcatcca gcagcagggg aagtgcctgg ctgccacctc caccttaatg 1561 tcctcccctg gatccccagt catactgcag atgtgcaacc ctagagaagg caagcagaaa 1621 tggaggagaa aaggatcttt catccagcat tcagtcagtg gcctctgcct ggagacaaag 1681 cctgcccagc tggtgaccag caagtgtcag gctgacgccc aggcccagca gtggcagctg 1741 ttgccacaca catgacggag ggattttctt gaagggtcag ctattgcact gtgctgggag 1801 gctggctgtg gctcctgttt gtgaagagaa ctcccagttc cttttcacag ccgctgagaa 1861 cacatccaca catctacccc acggccttgt cttggaactg ctcctgctat ccccacaccc 1921 tgcttcctca ccccactggc tcttgggcaa atgactgttg gtaccaggac cctgggggtc 1981 tcccctacaa agcagaccag cctggggcag atatacctac cacaggagcc ccctgtcttt 2041 cataggccaa ggatccacat acccatagag ttcatggatt ctagagggtc taggaatctc 2101 ttgaaattgt ccctaaaata ctgcatgtgt gtgcatacat gcattttcct ggggaaaaag 2161 tccatggctt ctaaaagagg tccctgatcc ccaaagggcc tgaacctctg ctctggattg 2221 aagccactgt ctgcccaagc tgccaccccc taatcttcct ccctggcgtg ctcaaactgc 2281 catcgcctgc tccctccaca cggcccttgg ggtcagcagc caagtgtctg tggtccgcag 2341 cacctgctct ggagggctct ccagcagttt cgcctcctga ctctcaccag cgtcctctcg 2401 gcagcactcc cgtgcccaag tgcacccctc tggacttgcc agcgcaggcc ccttcgctcc 2461 cagggccatg ctttgcctgt cctctgtcgt gatgtttctt ccgcagccag gtgcagcctc 2521 agatcccctg ttcatctggg aagcctcctg ccacagctta ggacagaact gggcccaggg 2581 caaaggcctc tccccagagg atggactaga aggcctgggc cacactcggg catggacctt 2641 tggggctggg gagccggggc tgcgcctgtt gaatgtaaga ggactgctga ccagagggcc 2701 ttcaagaggg tctctctgtc ctttgctgtg gtcagatcag gctctgcact tatcagccgg 2761 tcctttgtgg caacgcagcc ctgttctgtt tttgcttttc ctcttcttga ccaaagcatg 2821 tgccactagc tgtccttgag gacctcgtct ttatgaaaca cacacctgga ataaaaccac 2881 ttcttacaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //