LOCUS BC036809 3483 bp mRNA linear HUM 19-APR-2005 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10, mRNA (cDNA clone IMAGE:5737598), complete cds. ACCESSION BC036809 VERSION BC036809.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3483) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3483) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 79 Row: j Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7662041 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..3483 /db_xref="H-InvDB:HIT000051821" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5737598" /tissue_type="Duodenum, adenocarcinoma" /clone_lib="NIH_MGC_88" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3483 /gene="ARHGEF10" /gene_synonym="GEF10" /db_xref="GeneID:9639" /db_xref="MIM:608136" CDS 522..2504 /gene="ARHGEF10" /gene_synonym="GEF10" /codon_start=1 /product="ARHGEF10 protein" /protein_id="AAH36809.1" /db_xref="GeneID:9639" /db_xref="MIM:608136" /translation="MHSDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSECKN GIPRSFLRSNHKKQMQKLVKAAKDGTKDGLERTRAAVKRGRSFIRTKSLIAQDHRSSL EEEQNLFIDVDCKHPEAILTPMPEGLSQQQVVRRYILGSVVDSEKNYVDALKRILEQY EKPLSEMEPKVLSERKLKTVFYRVKEILQCHSLFQIALASRVSEWDSVEMIGDVFVAS FSKSMVLDAYSEYVNNFSTAVAVLKKTCATKPAFLEFLKQEQEASPDRTTLYSLMMKP IQRFPQFILLLQDMLKNTSKGHPDRLPLQMALTELETLAEKLNERKRDADQRCEVKQI AKAINERYLNKLLSSGSRYLIRSDDMIETVYNDRGEIVKTKERRVFMLNDVLMCATVS SRPSHDSRVMSSQRYLLKWSVPLGHVDAIEYGSSAGTGEHSRHLAVHPPESLAVVANA KPNKVYMGPGQLYQDLQNLLHDLNVIGQITQLIGNLKGNYQNLNQSVAHDWTSGLQRL ILKKEDEIRAADCCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWVNSLQMAKLA LEENHMGWFCVEDDGNHIKKEKHPLLVGHMPVMVAKQQEFKIECAAYNPEPYLNNESQ PDSFSTAHGFLWVRCVYLVLVQVHRESTFMVGVMRD" BASE COUNT 970 a 815 c 833 g 865 t ORIGIN 1 ccacgcgtcc ggaaaattta aaaatccgtg tgtattttct tgctagtgct ggtacttgaa 61 tatctgtatc atccacctat ccatccacct acccatattt ctataatcca ccgtccatcg 121 acatgcctgt catctgtcca ccatttctct ctgtctaatt ttcaaaacat cctgtaagtt 181 tatataaagg aagatttttc ttcttgtgaa gttctctaag gctgacaagt tacctggcat 241 gactgtggcg gatgcccata gccaggtggt cctcggggta cagatggggc aggggcactt 301 gtgagaaaca cctgaagtgc ttttccccag cctccccggc cctgcccggg tggtggaggc 361 gctgcacggt gccttccatg gagcaagccc ggggctccgc agggtcctca gcatgattca 421 gatttccttc cacccccagc tctagatgat ttggtaaaac cacaaacagg cacaaaacag 481 cccacatgga attctaaagt tttaatttca ttttggaatt tatgcactca gatgaaatga 541 tttatgatga tgttgagaat ggggatgaag gtggaaacag ctccttggaa tacggatgga 601 gttcgagtga atttgaaagt tacgaagagc agagtgactc ggagtgcaag aatgggattc 661 ccaggtcctt cctgcgcagc aaccacaaaa agcaaatgca gaagctcgtg aaggccgcga 721 aggacggcac caaggacggg ctggagagga ccagggcagc cgtgaagagg ggccgctcct 781 tcatcaggac caagtctctc atcgcacagg atcacagatc ttctcttgag gaagaacaga 841 atttgttcat tgatgttgac tgcaagcacc cggaagccat cttgaccccg atgcccgagg 901 gtttatctca gcagcaggtt gtaagaagat atatactggg ttcagttgtc gacagtgaaa 961 agaactacgt agatgctctt aagaggattt tggagcaata tgagaagccg ctgtctgaga 1021 tggagccaaa ggttctgagt gagaggaagc tgaagacggt gttctaccga gtcaaagaga 1081 tcctgcagtg ccactcgcta tttcagatcg cgctggccag ccgcgtttcc gagtgggact 1141 ccgtggaaat gataggcgat gtcttcgtgg cttcgttttc taagtccatg gtgctggatg 1201 catacagtga atatgtgaac aatttcagca cagccgtggc agtcctcaag aaaacatgtg 1261 ccacaaagcc cgcttttctt gaatttttaa agcaggaaca ggaggccagc cccgatcgaa 1321 ccacgctcta cagcctgatg atgaagccca tccagaggtt cccacagttc atcctcctgc 1381 tccaggacat gctgaagaac acctccaaag gccaccccga caggctgcct cttcagatgg 1441 ccctgacaga gctcgaaaca ctagcagaga agttaaatga aagaaagaga gatgctgatc 1501 aacgctgtga agtgaagcaa atagccaaag ccataaacga aagatacctg aacaagcttc 1561 tcagcagtgg aagccgatac ctcattcgat cagatgatat gatagaaaca gtttacaacg 1621 acagaggaga gattgttaaa accaaagaac gccgagtctt catgttaaat gatgtgttaa 1681 tgtgtgccac cgtcagctca cgcccctctc atgacagccg tgtgatgagc agccagaggt 1741 acttgctgaa gtggagcgtt ccactgggac atgtggacgc catcgagtat ggcagcagcg 1801 caggcacggg cgagcacagc aggcaccttg ccgttcaccc gccggagagc ctggccgtgg 1861 ttgctaacgc gaaaccaaac aaagtttaca tggggccagg acaactgtat caagatttac 1921 aaaacttgtt gcatgactta aatgtaattg gccaaatcac tcagctgata ggaaacctta 1981 aaggaaacta tcagaactta aaccagtcag tagcccatga ctggacatca ggtttacaaa 2041 ggcttatttt gaagaaagaa gatgaaatca gagctgcgga ctgctgcaga attcagttac 2101 agcttcccgg gaagcaggac aaatctgggc gaccgacgtt ctttacagct gtgttcaata 2161 cgttcacccc tgccatcaag gagtcctggg tcaacagctt acagatggcc aagctcgccc 2221 tagaggagaa ccacatgggc tggttctgtg tggaagacga tgggaatcac attaaaaagg 2281 agaagcatcc tctcctcgtc ggacacatgc ccgtgatggt ggccaagcag caggagttca 2341 agattgaatg tgctgcttat aaccctgaac cttacctaaa taatgaaagc cagccagatt 2401 cattttccac ggcacatggt ttcctgtggg taagatgtgt ttatttggtt ttggtacaag 2461 ttcacagaga atcaacgttc atggtcggtg tgatgagaga ctgagatgtg aattgctcag 2521 tagagagttg gcggtggcgt atcccagagt gtacttagaa acatgaaaac ttctttgaaa 2581 gggagctgat cacttttgga aaagatttac agttcttagg aatgcaaata tttgtttctt 2641 ttccttttca tctaaaacat ttaccagata aagttgagtc cagagacaac taactaataa 2701 gagaataatt ttaatatgtt tttccatttt ggtgtcaaca ttgcatggat tttttttctt 2761 gttccaagac tggctttttc cagtggaaac ttagcagtta aaattaattt gttccaaatg 2821 aaatattgca tctgaaatta ggctggaatt gcagtagacg ttcctggttc ttgcaaacca 2881 gaggacattc ttgaagctgt gtggtcccag gctctcccct ctctggtttc ctgtgttccc 2941 tccctgcagc ctcagactcg ccctccaggg ctccactgtg cttttccaaa ctctcatcct 3001 ttcctcccag gcgtcctgtg cagcacgcca ctgcctctca cttctcacat ccacagctcc 3061 tgcttggtca gtgttcctag ttgagtgtca gaaattgaac aacccaatta gctggtattt 3121 catttgtacc aacctatgaa tggaggagta gccttaattc ccttgggggc ttccacttct 3181 aagagaactg ttttccgtcc aggtaggcag acctgtcatg gctgaagctt catcacctgg 3241 cctggtcata gcccccaggc cctgtaggca ggacaggggc ttggcagatt ggcatccttc 3301 ccacaaaagc atgaaagtag gatgtctgta tgtagcgaca acaaatacaa gaataaggag 3361 agtttaacaa cattctcaaa gttggtggaa aagaaaaaga atcaatgaaa acatcaccct 3421 aaaccagcta gtgctttctg tttacaggga tcagacccct tcccacttaa aaaaaaaaaa 3481 aaa //