LOCUS BC036806 1533 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens extracellular matrix protein 2, female organ and
adipocyte specific, mRNA (cDNA clone IMAGE:5725929), partial cds.
ACCESSION BC036806
VERSION BC036806.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1533)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036806.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557542.
FEATURES Location/Qualifiers
source 1..1533
/db_xref="H-InvDB:HIT000051820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5725929"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1533
/gene="ECM2"
/db_xref="GeneID:1842"
/db_xref="MIM:603479"
CDS <1..523
/gene="ECM2"
/codon_start=2
/product="ECM2 protein"
/protein_id="AAH36806.1"
/db_xref="GeneID:1842"
/db_xref="MIM:603479"
/translation="KLAGGKKSNMKIAVLFCFFLLIIFQTDFGKNEEIPRKQMRKIYH
RRLRKSSTSHKHRSNRQLGIPQTTVFTPVARLPIVNFDYSMEEKFESFSSFPGVESSY
NVLPGKKGHCLVKGITMYNKAVWSPEPCTTCLCSDGRVLCDETMCHPQRCPQTVIPEG
ECCPVCSATGTEI"
BASE COUNT 527 a 280 c 306 g 420 t
ORIGIN
1 gaaattggct ggtggaaaaa aatcaaacat gaagattgca gttttgtttt gtttttttct
61 gcttatcatt tttcaaactg actttggaaa aaatgaagaa attcctagga agcaaatgag
121 gaagatctac cacagaaggt tgaggaaaag ttcaacctca cacaagcaca gatcaaacag
181 acagcttgga attccgcaaa caacagtttt tacaccagta gcaagacttc ctattgttaa
241 ctttgattat agcatggagg aaaagtttga atccttttca agttttcctg gagtagaatc
301 aagttataat gtgttaccag gaaagaaggg acactgtttg gtaaagggca taaccatgta
361 caacaaagct gtgtggtcgc ctgagccctg cactacctgc ctctgctcag atggaagagt
421 tctttgtgat gaaaccatgt gccatcccca gaggtgcccc caaacagtta tacctgaagg
481 ggaatgctgc ccggtctgct ccgctactgg tacagagatt tagctaagca aaatatcagt
541 gtgtgattaa tctttaactt ccatttgttt ttgttactaa ttttagatta aaattatgat
601 acattagtca gatctgagta cttaaaatat tggcaaaatg ctgattaaca tagaaaatat
661 ctgggaaaat gtatggtagg ggatataaat aatagactgt ggctttatag ttctagctct
721 atcagattca gtaaacttgg atgagattac attccacatt tgactctcag ctttagagat
781 atggtaacag aatttctaca acagatcctg aattcttatt gcattaaggg ctctgctttg
841 gtctatatgt gcattatccc acttaatcca gtgcaacgtg cctttatcac cttgaagcca
901 gggtaaacaa aggaagagtg atttgcatct aaagagaaca aagccccaac cctctggcta
961 tacccaacca ctcaaaggca gcacaggaac ccacatcact gcttggataa tcccaggaaa
1021 atgcagaaaa agtgtagcct gaagcatgat tttctcatgt ggcacttctg tgtgcaggag
1081 atcacagcgc gggttttgtt ggctgctcat ggaccccttc tccaatgagg ctcatacctg
1141 actgaatgaa ggacccttgg gagggaggcc cagtctcctc tgagaaaagc ctaaccaaca
1201 ccttatgaaa ataagcaaat aaatacttgt taaataattg gctgggaagg gatagggaca
1261 tcttctcttg tctataacca aggtagattg ctcccatgca cacagatgat cacagggtag
1321 gtgtctacaa aagtctcctt gccaggaaaa acttttgact atttagaaat tgtgttttgc
1381 gttatactac caaatatttc actaatattt aaaaagagtt aggaaaaaag tgttcaatga
1441 aatggattcc ttggagtgaa ataaatacaa ggtttacaaa gtaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//