LOCUS       BC036786                3810 bp    mRNA    linear   HUM 07-OCT-2003
DEFINITION  Homo sapiens cadherin 7, type 2, mRNA (cDNA clone MGC:45983
            IMAGE:5744842), complete cds.
ACCESSION   BC036786
VERSION     BC036786.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Life Technologies, Inc.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 79 Row: l Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 16306488.
FEATURES             Location/Qualifiers
     source          1..3810
                     /db_xref="H-InvDB:HIT000051812"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:45983 IMAGE:5744842"
                     /tissue_type="Brain, adult medulla"
                     /clone_lib="NIH_MGC_119"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3810
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /db_xref="GeneID:1005"
                     /db_xref="MIM:605806"
     CDS             696..2588
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /codon_start=1
                     /product="CDH7 protein"
                     /protein_id="AAH36786.1"
                     /db_xref="GeneID:1005"
                     /db_xref="MIM:605806"
                     /translation="MKLGKVEFCHFLQLIALFLCFSGMSQAELSRSRSKPYFQSGRSR
                     TKRSWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFIIDENTG
                     DIHATKRLDREEQAYYTLRAQALDRLTNEPVEPESEFVIKIQDINDNEPKFLDGPYTA
                     GVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVIKTALPNM
                     DREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLP
                     VASVVARIKAADADIGANAEMEYKIVDGDGLGIFKISVDKETQEGIITIQKELDFEAK
                     TSYTLRIEAANKDADPRFLSLGPFSDTTTVKIIVEDVDEPPVFSSPLYPMEVSEATQV
                     GNIIGTVAAHDPDSSNSPVRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAIHNI
                     TVLAMESQNPSQVGRGYVAITILDINDNAPEFAMDYETTVCENAQPGQVIQKISAVDK
                     DEPSNGHQFYFSLTTDATNNHNFSLKDNKDNTASILTRRNGFRRQEQSVYYLPIFIVD
                     SGSPSLSSTSTLTIRVCDCDADGVAQTCNAEAYVLPAGLSTGALIAILACVLTLLGRY
                     CFQGLL"
     misc_feature    912..1148
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /note="CA; Region: Cadherin repeats. Cadherins are
                     glycoproteins involved in Ca2+-mediated cell-cell
                     adhesion. Cadherin domains occur as repeats in the
                     extracellular regions which are thought to mediate
                     cell-cell contact when bound to calcium"
                     /db_xref="CDD:smart00112"
     misc_feature    1167..1409
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /note="cadherin; Region: Cadherin domain"
                     /db_xref="CDD:pfam00028"
     misc_feature    1545..1820
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /note="CA; Region: Cadherin repeats. Cadherins are
                     glycoproteins involved in Ca2+-mediated cell-cell
                     adhesion. Cadherin domains occur as repeats in the
                     extracellular regions which are thought to mediate
                     cell-cell contact when bound to calcium"
                     /db_xref="CDD:smart00112"
     misc_feature    1890..2135
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /note="CA; Region: Cadherin repeats. Cadherins are
                     glycoproteins involved in Ca2+-mediated cell-cell
                     adhesion. Cadherin domains occur as repeats in the
                     extracellular regions which are thought to mediate
                     cell-cell contact when bound to calcium"
                     /db_xref="CDD:smart00112"
     misc_feature    2151..2444
                     /gene="CDH7"
                     /gene_synonym="CDH7L1"
                     /note="cadherin; Region: Cadherin domain"
                     /db_xref="CDD:pfam00028"
BASE COUNT         1044 a          904 c          877 g          985 t
ORIGIN      
        1 ctgggaggcg ccgaagtctc agtggctccc tgggccggcc tccgacagcg ctgacagcag
       61 gcgcccgccg cccaccatcg tcgccctctt cccctccctc ttcggccccg gctccggcgc
      121 gctctctcct cctctcctgc gcgccctctc gccctctctc tggccgcgcg ctcccgctgg
      181 ctccggaccc tgcgtctcag ctgcccgggc gagccggagg ggcccctcgc agtgagcaga
      241 cgcagcgggc ccccggcgcc cgaggccggg gcagggtccc cgcgcaccgc ggagtgggct
      301 gtgattggag gaggagcccg tgccgggcgg gcccgagcgg gtgtcgagcc ggttcctcca
      361 gtctgccccg cgcgcggagc tgcgcgcact gggtccccaa gagcccgcgg gcgtccggca
      421 gccgagcgca cgttctttcg gatgcacacg cccgggtccc tggcgtctga cgccgtgggg
      481 agggcagcga ggccccaggt acttactaca ccattctttg gcgaaggcta ttcagcagtg
      541 gtgacctctt ccaatccaac actctacaga ttattatctc tggactccca gctgacaccc
      601 tgccggaggc aagagctact aagccaactg gaactgtgcc ttttctcttg tcaaggtttt
      661 tttcttacac aggaaaaaga aagaaaaaaa aaaagatgaa gttgggcaaa gtggagttct
      721 gccattttct gcagctaata gctcttttcc tgtgtttttc tgggatgagt caagcagaac
      781 tctcaaggtc cagatcaaag ccctatttcc aatcagggag gtcccggacc aagcgcagct
      841 gggtgtggaa tcagttcttt gtgctggagg aatacatggg ttcagacccc ctctatgtag
      901 gaaagcttca ctctgatgtt gataaaggag atggttccat caaatacatc ttgtcaggcg
      961 aaggggcaag ttccattttc attattgatg agaacactgg ggatattcat gccaccaaga
     1021 gactggatcg tgaggagcag gcctactaca cgctccgagc tcaagcgctg gataggctca
     1081 ccaacgaacc cgtggagccc gagtcggagt ttgtcatcaa aattcaggat atcaacgaca
     1141 atgaacccaa atttttggat ggcccataca cggcaggagt tcccgaaatg tctcccgtgg
     1201 ggacctcagt ggtacaagtg acagcgacgg atgctgatga tcctacatat ggcaacagtg
     1261 ccagagtggt ctacagtatt ctgcaaggac agccgtactt ctcagtggag ccaaagacag
     1321 gagtcatcaa gactgccctt ccaaacatgg atagagaggc taaagaccag tatttgcttg
     1381 ttattcaggc aaaggatatg gttggtcaaa atggaggact gtcaggaact acatcagtca
     1441 ctgtgaccct aactgatgtc aacgataatc cacctcgctt tcctcgaagg tcttatcaat
     1501 ataacgtccc agagtcatta cctgtagcct cagttgtggc cagaattaaa gctgctgatg
     1561 cagatattgg agctaatgct gaaatggagt acaagattgt ggatggtgat ggtttgggca
     1621 tttttaagat ttctgttgac aaagaaaccc aggaaggaat cattactata cagaaggagc
     1681 tggattttga agccaaaaca agttacacgc tacggataga agctgcaaat aaagatgccg
     1741 accctcgctt tctgagcttg ggtccgttca gtgacacgac aactgtgaag ataattgtgg
     1801 aagatgtaga tgagccccct gtgttctctt cacccttgta ccctatggag gtgtcggaag
     1861 ctacccaggt tgggaatatc attggcactg tagcagctca tgacccagat tcttccaata
     1921 gccctgtgag gtactcaatt gacagaaaca cagacttgga gagatacttc aatattgatg
     1981 ccaacagtgg ggtcatcaca actgccaagt ctttggatcg agagacaaat gctattcaca
     2041 atatcacagt ccttgcaatg gagagccaga atccatctca agtaggaaga ggctatgtgg
     2101 ccatcactat acttgacatc aatgataacg cccctgaatt tgccatggac tatgagacca
     2161 ccgtctgtga aaatgcccag ccggggcagg ttatccagaa aatcagtgct gtggataaag
     2221 atgagccatc caatggacac cagttttact tcagcttaac aacggatgca acaaataacc
     2281 acaacttttc attgaaagat aacaaagaca acacagcctc aatactgacc aggagaaacg
     2341 gcttccggag acaggaacaa tcagtttact atctgccaat tttcattgtg gacagtggat
     2401 ctccctcact tagcagcacc agcaccctca ccatccgcgt gtgtgactgt gatgctgacg
     2461 gcgtagccca gacctgcaat gcagaggcct atgtcctacc tgctggcctc agtacaggag
     2521 ccctgatagc catactcgcc tgtgtcttga cattattggg taggtactgt ttccagggct
     2581 tgctctgaaa gagctgtcac aataaccaca tgtcacgact tgcctattat cttctccatt
     2641 tggtgaacat atgcagatat tctactggat ggtgtttgtt ttgttttgtt tttctttgag
     2701 acggggtctc actctgttgc ccaggctgga gtgcagtaga atgatctggg ctcactgcag
     2761 cctctgcctc ccaggttcaa gcaattctcc cacctcagcc tcccgagtag ctgggattac
     2821 aggggtgcac caccacaccc agctaacttt tgtatcttta gtagagactg agtttcacca
     2881 tgttgggcag gctggtcttg aactcctgac ctcaggtgat ccacccacct tggcctccca
     2941 aagtgctggg attacaggag tgagccacag ctcctggcct ggatggtgtt ttgctcacta
     3001 agtaatacaa ttgttggcca cactttccag tggtatattt gaagtataac tcagacaaaa
     3061 agttgtatca atttcatttt caaagcaaca gtgaagataa atggcttatg ctttaaatta
     3121 atgcttttta ggattaaaaa taatctatct tatcccagtt ctttgcttta gagcactcta
     3181 cagaggagat acactagact ggagaataca ttttctatat tgttttgaca atatgcttat
     3241 tttagaaatt atggctttat attctacttt ttaaagaaat tatttgattg ctttcttaaa
     3301 ttatttgcaa atttgaaatg attacaattt cagcaatgca aatcttatat ttttaaagta
     3361 ttaaatacta acacatttaa ttgtacattt ccatgattag tttattactc ggttaaatta
     3421 aatttataac tcatatttgc agtaactcag attttgcagc atccttttaa aaattgggag
     3481 atgtccaatg tggacactgg gtaatgggtt tattccaaag aaacattttt cttcacattg
     3541 taacttgtaa cacgaacaca acaagaacag agtaaacatt caatataccg ttccatatgg
     3601 tgaatgttca ataaatttta agtgttactg atggaaaatt ataagctaag acctagttac
     3661 taatacatta taaatgctgt cgtgaaaatg gaggttattg tcttaagtaa cttaagctaa
     3721 acaagtaaat ctaaaagaaa ataaactata ttttgcatag aactttaaaa aaaaaaaaaa
     3781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//