LOCUS       BC036773                2200 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens opsin 3, mRNA (cDNA clone MGC:46103 IMAGE:5723543),
            complete cds.
ACCESSION   BC036773
VERSION     BC036773.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2200)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Invitrogen
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 79 Row: g Column: 14.
FEATURES             Location/Qualifiers
     source          1..2200
                     /db_xref="H-InvDB:HIT000051805"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:46103 IMAGE:5723543"
                     /tissue_type="Ovary, pooled from 3 adults"
                     /clone_lib="NIH_MGC_125"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2200
                     /gene="OPN3"
                     /db_xref="GeneID:23596"
                     /db_xref="HGNC:HGNC:14007"
                     /db_xref="MIM:606695"
     CDS             98..1306
                     /gene="OPN3"
                     /codon_start=1
                     /product="opsin 3"
                     /protein_id="AAH36773.1"
                     /db_xref="GeneID:23596"
                     /db_xref="HGNC:HGNC:14007"
                     /db_xref="MIM:606695"
                     /translation="MYSGNRSGGHGYWDGGGAAGAEGPAPAGTLSPAPLFSPGTYERL
                     ALLLGSIGLLGVGNNLLVLVLYYKFQRLRTPTHLLLVNISLSDLLVSLFGVTFTFVSC
                     LRNGWVWDTVGCVWDGFSGSLFGIVSIATLTVLAYERYIRVVHARVINFSWAWRAITY
                     IWLYSLAWAGAPLLGWNRYILDVHGLGCTVDWKSKDANDSSFVLFLFLGCLVVPLGVI
                     AHCYGHILYSIRMLRCVEDLQTIQVIKILKYEKKLAKMCFLMIFTFLVCWMPYIVICF
                     LVVNGHGHLVTPTISIVSYLFAKSNTVYNPVIYVFMIRKFRRSLLQLLCLRLLRCQRP
                     AKDLPAAGSEMQIRPIVMSQKDGDRPKKKVTFNSSSIIFIITSDESLSVDDSDKTNGS
                     KVDVIQVRPL"
BASE COUNT          589 a          531 c          491 g          589 t
ORIGIN      
        1 caggcggcgg agccccaacc ccacccagtg cggagcgcgc cgcgagcccc gccgcaagct
       61 gagcgcctcc gcccgccagg cgcgccggcg ccgggccatg tactcgggga accgcagcgg
      121 cggccacggc tactgggacg gcggcggggc cgcgggcgct gaggggccgg cgccggcggg
      181 gacactgagc cccgcgcccc tcttcagccc cggcacctac gagcgcctgg cgctgctgct
      241 gggctccatt gggctgctgg gcgtcggcaa caacctgctg gtgctcgtcc tctactacaa
      301 gttccagcgg ctccgcactc ccactcacct cctcctggtc aacatcagcc tcagcgacct
      361 gctggtgtcc ctcttcgggg tcacctttac cttcgtgtcc tgcctgagga acggctgggt
      421 gtgggacacc gtgggctgcg tgtgggacgg gtttagcggc agcctcttcg ggattgtttc
      481 cattgccacc ctaaccgtgc tggcctatga acgttacatt cgcgtggtcc atgccagagt
      541 gatcaatttt tcctgggcct ggagggccat tacctacatc tggctctact cactggcgtg
      601 ggcaggagca cctctcctgg gatggaacag gtacatcctg gacgtacacg gactaggctg
      661 cactgtggac tggaaatcca aggatgccaa cgattcctcc tttgtgcttt tcttatttct
      721 tggctgcctg gtggtgcccc tgggtgtcat agcccattgc tatggccata ttctatattc
      781 cattcgaatg cttcgttgtg tggaagatct tcagacaatt caagtgatca agattttaaa
      841 atatgaaaag aaactggcca aaatgtgctt tttaatgata ttcaccttcc tggtctgttg
      901 gatgccttat atcgtgatct gcttcttggt ggttaatggt catggtcacc tggtcactcc
      961 aacaatatct attgtttcgt acctctttgc taaatcgaac actgtataca atccagtgat
     1021 ttatgtcttc atgatcagaa agtttcgaag atcccttttg cagcttctgt gcctccgact
     1081 gctgaggtgc cagaggcctg ctaaagacct accagcagct ggaagtgaaa tgcagatcag
     1141 acccattgtg atgtcacaga aagatgggga caggccaaag aaaaaagtga ctttcaactc
     1201 ttcttccatc atttttatca tcaccagtga tgaatcactg tcagttgacg acagcgacaa
     1261 aaccaatggg tccaaagttg atgtaatcca agttcgtcct ttgtaggaat gaagaatggc
     1321 aacgaaagat ggggccttaa attggatgcc acttttggac tttcatcata agaagtgtct
     1381 ggaatacccg ttctatgtaa tatcaacaga accttgtggt ccagcaggaa atccgaattg
     1441 cccatatgct cttgggcctc aggaagaggt tgaacaaaaa caaattcttt taattcaacg
     1501 ggtgctttac ataatgaaaa aaccacttgt ggcacacgat gggcatctaa catcatcatc
     1561 ttctaatgtg ttggagattt tcatttcaaa tatatttttt aaattactct attttccaaa
     1621 acacgttaat gcatttttct cgaaaatacc ttactgtaaa aataactgtc gcgtacacat
     1681 gtgtgaagta gctagaacat actgaatttt ttttgtactg ttggactcta ttcagtgtca
     1741 tgtcctatat ctgatcaagt tatcaaggag ataattctag aatgaaaaag aaaatcctct
     1801 tgttggaaac aaaagacgtt ttatatgtgc agtatgacaa agaggagttt cagagacaac
     1861 tttgaatcct tgtcagcctg gagaccagca ccagaggaat ctacaaggca aactcccata
     1921 tatttgcttc ccccaaattg ctgcccctac agactcaaag ctctttttct ttgttttgtt
     1981 gtttctctaa aaatttactg ttctttgtcg atgctatata agccagggag ttctaagacg
     2041 ccagctcttt gagatttgct cattcccctg tatttcccac atatatatta catatacccg
     2101 ctaataaatt tatgtttgtt ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//