LOCUS BC036757 5664 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens coiled-coil domain containing 6, mRNA (cDNA clone
MGC:46159 IMAGE:5549623), complete cds.
ACCESSION BC036757
VERSION BC036757.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5664)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5664)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036757.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46852389.
FEATURES Location/Qualifiers
source 1..5664
/db_xref="H-InvDB:HIT000094596"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46159 IMAGE:5549623"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5664
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
CDS 72..1496
/gene="CCDC6"
/gene_synonym="H4"
/gene_synonym="PTC"
/gene_synonym="TPC"
/codon_start=1
/product="coiled-coil domain containing 6"
/protein_id="AAH36757.2"
/db_xref="GeneID:8030"
/db_xref="HGNC:HGNC:18782"
/db_xref="MIM:601985"
/translation="MADSASESDTDGAGGNSSSSAAMQSSCSSTSGGGGGGGGGGGGG
KSGGIVISPFRLEELTNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQ
ARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELE
QHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLW
KRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQL
RAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDE
RYFNEMSAQGLRPRTVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTRAGMSY
YNSPGLHVQHMGTSHGITRPSPRRSNSPDKFKRPTPPPSPNTQTPVQPPPPPPPPPMQ
PTVPSAATSQPTPSQHSAHTSSQP"
BASE COUNT 1647 a 1190 c 1167 g 1660 t
ORIGIN
1 ggacgcgtgg gcggccttcg tcgccgccgc ctccctgctg ctcctcctcc tttccccagc
61 ccgccgcggc catggcggac agcgccagcg agagcgacac ggacggggcg gggggcaaca
121 gcagcagctc ggccgccatg cagtcgtcct gctcgtcgac ctcgggcggc ggcggtggcg
181 gcgggggagg cggcggcggt gggaagtcgg ggggcattgt catctcgccg ttccgcctgg
241 aggagctcac caaccgcctg gcctcgctgc agcaagagaa caaggtgctg aagatagagc
301 tggagaccta caaactgaag tgcaaggcac tgcaggagga gaaccgcgac ctgcgcaaag
361 ccagcgttac catccaagcc agggctgagc aggaagaaga attcattagt aacactttat
421 tcaagaaaat tcaggctttg cagaaggaga aagaaaccct tgctgtaaat tatgagaaag
481 aagaagaatt cctcactaat gagctctcca gaaaattgat gcagttgcag catgagaaag
541 ccgaactaga acagcatctt gaacaagagc aggaatttca ggtcaacaaa ctgatgaaga
601 aaattaaaaa actggagaat gacaccattt ctaagcaact tacattagaa cagttgagac
661 gggagaagat tgaccttgaa aatacattgg aacaagaaca agaagcacta gttaatcgcc
721 tctggaaaag gatggataag cttgaagctg aaaagcgaat cctgcaggaa aaattagacc
781 agcccgtctc tgctccacca tcgcctagag atatctccat ggagattgat tctccagaaa
841 atatgatgcg tcacatcagg tttttaaaga atgaagtgga acggctgaag aagcaactga
901 gagctgctca gttacagcat tcagagaaaa tggcacagta tctggaggag gaacgtcaca
961 tgagagaaga gaacttgagg ctccagagga agctgcagag ggagatggag agaagagaag
1021 ccctctgtcg acagctctcc gagagtgagt ccagcttaga aatggacgac gaaaggtatt
1081 ttaatgagat gtctgcacaa ggattaagac ctcgcactgt gtccagcccg atcccttaca
1141 caccttctcc gagttcaagc aggcctatat cacctggtct atcatatgca agtcacacgg
1201 ttggtttcac gccaccaact tcactgacta gagctggaat gtcttattac aattccccgg
1261 gtcttcacgt gcagcacatg ggaacatccc atggtatcac aaggccttca ccacggagaa
1321 gcaacagtcc tgacaaattc aaacggccca cgccgcctcc atctcccaac acacagaccc
1381 cagtccagcc acctccacct ccacctccgc cacccatgca gcccacggtc ccctcagcag
1441 ccacctcgca gcctactcct tcgcaacatt cggcgcacac ctcctcccag ccttaatgca
1501 tgagcttagt ctgaatttca agttgggact catccaatgg agccgtctac tcaacgccaa
1561 aggcttcctt ctctggcata tttggatatg acttatttgc actgaggtta tctaggcttc
1621 actatccatt gtgttgtaaa tgtttgtcag aaatgcagcc agtgttgtgg gtctacaaca
1681 ctaaccagac gactttttcc atcagtgttt tacttgaatc ttcatgtacg tccattccct
1741 ggctggaacc ttcgctgttt ggtatttggt atttcagcag cagtgtgcaa tttttgcttg
1801 gcccagagct tcattctcct ggcttttagg tttgtaaaag aaaaagggat atctttttta
1861 tatttttttc catgaatctg cagaaaatta ctgagctgtt gttaccctcc tctcattata
1921 atagtgttta ccaaacatac caataattca gcactacaat tcagaccttt gaaaatctgg
1981 ctttcagtgt agaacagaaa gttagatgaa tcagtgccca agacatattt tctgtttaac
2041 agaactttct acagatacat tttttacagg ttattttcat tgtgttattg acatccatgt
2101 ctctcgtaaa acagatggcc caaagtaatg aatcatgtgg ctgtaccttc tccacataaa
2161 tgggatggat aattatcgta tattaagatg tgattctctt ttttatcctt aatgttaatc
2221 tacttaacct ggccccctct aacatgagtc gataaatgtt gtcctactca ccggtggttt
2281 caatggctaa ttagaatgtg ttatttgatt tctgctgcag aaggcagtgt gattgtaaca
2341 aaaacaatgc ggcttccccc tttcgtactt catttgtgtt ctcttaaaat agagtttgaa
2401 caaatatttt aaaggtgcaa aataccatta gaaaatacta tttgaaatgg acattatcgc
2461 attatcttgg cataatggcc agaaaatatt gtattgcttg gcagaaaaga aaataaggtc
2521 taaaggaaag tagcacatta gcattgatgg ctgttcattt cacccagtat aagcaagtgc
2581 agtgtacaaa gaagtatatt ctgaatacat tatttccatt catttagcac aaataaatca
2641 tttggtttca ctttgcagtg gaacactgag tcactctttt cttaacacgt gcaacatctt
2701 aatttttgtt tttcagcagt tgctgttttg tactttggta gtgaagtgat ttttaccacc
2761 tgtgtttgca tatttatata tgctgtggat gaaaataact tactagagaa tgtatatttt
2821 atgacaagaa tgtgtatctg ttggatataa tcagagaact gaaaagtaat ttatcagtaa
2881 tttttaagag tccatgtttt gtgacaacca tctctaatag ccaactcttt attaaacaca
2941 ctcctaaaaa taaggaacca tgacattgta gatatttaat attgtacagt atagaaacct
3001 ccatttttgc cttcgaatgc atatttaaga gttaacagaa tgaaaaaaaa aagtcttgtt
3061 ggataatagt gtttgactag cgttttaaga acttgagagt aaaagcaaca ataagatttt
3121 ttcacctctt cctgcttcca cccccaaact gagaacatca ctcaattgtt tggaagaaac
3181 tgtaggtcta tataaatttt atttataatg tatgtgtaat atacataatc ataatacagt
3241 tctcagatgc agggaagaag tttggcattt aatcattgag gctttaggtt tttgatgtga
3301 tcagactggg ccatgtcaaa cccggaattt tcaccaacag ttcactcacc ctcctggtac
3361 attgccattc caaggaattc tgagagtagg caaacaaatt ttgccttcat ggtacagttc
3421 tcagtttttc ttataggaga aatatggtat atgtttataa gaatctttta tgagattata
3481 gatttcaatg ctgtggatag tgtcttgcac ccaaacaaga aagtccataa tggaatgatc
3541 ttccctcagc ttcctatcga tttagttacc tcttgaaagc acaaaaatta aaacattgcc
3601 atatgttgaa tttttaaaaa gcacttggag tgagcgaaca tttcctgata aatgcctttt
3661 agagataggt tcttgatatt cagacatctg cagaaatgtt ctggttccca aagtcatttc
3721 acttcgaaat aaaacacagc tccttcaaac agcacttttt ccacataaat ctagttgcct
3781 ctccctgtgg acattcagaa ctgatagaac aaacactact cttttgaatt tgatggttcg
3841 tgtcctttaa agtgtttgag gacctatgca gagcctgtaa cacttgggta gtacctgcta
3901 ggacaatttc ttggcaattg tcttactact agggatcagt aagatttaga ttctgagccc
3961 ataatggcaa cagccccctc acctatggga agctgacttc cctcagtcgg gcacttctca
4021 tgggggctga acatggttcc tgccattctg ttacccactc tcccaggtga gccctggatt
4081 ggctcccaga aggcctttgt aaaatcagta gccatcctgc aggcaggtgg gagcaacagg
4141 ggcttcagta gcttcatttt cctgtcttgc agacagagac ccttggctac cactgtgctg
4201 ctaataggat aagtactctg ttgccagatt accatgcctt ttatacaaaa ccaaattaac
4261 ttacctaata cctgacacct ctttgggctc tgaactgctt tctctcatca agcatgctag
4321 cactctagac agaattctag aaatttggca gacagtggaa gcctttaatt gaacttactc
4381 cttcgttgac tgaaaggagt tttaaattct gagctcctga gatactgact agcaaccatg
4441 gaatgaatgt gtgaccagaa agtggctttg acaccaagtg ctactgtccc tttgtaattg
4501 gcttctaaca gattcaacca gaaataattg ataatgtgaa tttttgttaa ttgttcactt
4561 gtaggaaaat agaacatgta tcaccctttg ttaggtagac atgaactttt cctgcacaaa
4621 gccttgcttt tagagaatgc ccaataaggc aagaaaaagc atagtaactt gtgctttgag
4681 agctcaatat ttgtatctta tcagtacaga agaaatattt ctgtgtaact tgatcttctg
4741 tctagtactt gtcttatagg taaccaacac tgaaaacttt gtagtgatga ctaccaaaga
4801 aatacatagt aaaacaacct tttatttcca aattgttaaa gagccagcca ttgatgctgc
4861 tacatgagtt ccatgctcaa gagccattgt aagagattaa ggggtttcta ggtttttggt
4921 gattttttgt ttgttttttt ctttgttttt tagggttttt ttttcttctt taattttttg
4981 attaaaacat acacacagct gttagcataa agtcgtgggg ggcattttct ggaatgctca
5041 gcagttctga ttaactgcca agcccaggtt gcctctcatg aggcaactga aaaaatcctg
5101 tgtcttgata gcatgggtgc tgtgtgtgtg catgtgtgtg tctgcattca tgccttaact
5161 cgggttactg cacaacttta gttcttgact tagtctgcac cgtcatctag attgtattgt
5221 acatctcggt ctgaacttca tcctggcaaa aacaaagttg caggcacaac agtttaagaa
5281 tgcattcctc cagaagagta tctggtcagg ttgaccctga gccttctttg gacttgattt
5341 ggaacttagc ctggaaagcg aaagtggact gtccaacaga aagatgtcaa caaggaaaag
5401 aggagagcca agcgctagca tgccttttgc ctctgcatat ctgtgcacac tgtatgttgt
5461 tcatgatagc ttgtctacaa cttgactagg ttggagttct ggtaatagtg gcaatcttga
5521 cattcttggt cagagtttag agagatgtaa gactttcaat taatgtctta tttactcctt
5581 tatgttgatt agtctttgat acatgtgctg aatcagaaac ctaaataaag ataatttttt
5641 aaaatgtaaa aaaaaaaaaa aaaa
//