LOCUS BC036743 2392 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquilin 3, mRNA (cDNA clone MGC:44847
IMAGE:5167911), complete cds.
ACCESSION BC036743
VERSION BC036743.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16753208.
FEATURES Location/Qualifiers
source 1..2392
/db_xref="H-InvDB:HIT000051789"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44847 IMAGE:5167911"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2392
/gene="UBQLN3"
/gene_synonym="TUP-1"
/db_xref="GeneID:50613"
/db_xref="HGNC:HGNC:12510"
/db_xref="MIM:605473"
CDS 102..2069
/gene="UBQLN3"
/gene_synonym="TUP-1"
/codon_start=1
/product="ubiquilin 3"
/protein_id="AAH36743.1"
/db_xref="GeneID:50613"
/db_xref="HGNC:HGNC:12510"
/db_xref="MIM:605473"
/translation="MAKGGEALPQGSPAPVQDPHLIKVTVKTPKDKEDFSVTDTCTIQ
QLKEEISQRFKAHPDQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKRQHRAMGNEC
PAASVPTQGPSPGSLPQPSSIYPADGPPAFSLGLLTGLSRLGLAYRGFPDQPSSLMRQ
HVSVPEFVTQLIDDPFIPGLLSNTGLVRQLVLDNPHMQQLIQHNPEIGHILNNPEIMR
QTLEFLRNPAMMQEMIRSQDRVLSNLESIPGGYNVLCTMYTDIMDPMLNAVQEQFGGN
PFATATTDNATTTTSQPSRMENCDPLPNPWTSTHGGSGSRQGRQDGDQDAPDIRNRFP
NFLGIIRLYDYLQQLHENPQSLGTYLQGTASALSQSQEPPPSVNRVPPSSPSSQEPGS
GQPLPEESVAIKGRSSCPAFLRYPTENSTGQGGDQDGAGKSSTGHSTNLPDLVSGLGD
SANRVPFAPLSFSPTAAIPGIPEPPWLPSPAYPRSLRPDGMNPAPQLQDEIQPQLPLL
MHLQAAMANPRALQALRQIEQGLQVLATEAPRLLLWFMPCLAGTGSVAGGIESREDPL
MSEDPLPNPPPEVFPALDSAELGFLSPPFLHMLQDLVSTNPQQLQPEAHFQVQLEQLR
SMGFLNREANLQALIATGGDVDAAVEKLRQS"
BASE COUNT 594 a 692 c 569 g 537 t
ORIGIN
1 tgtgtagcaa gatgagggag gtttggagcc ctgcataaag agaaggacgg gaccacagct
61 gactgctgtg tccccacaga tctgggcctc ctgctgccac catggccaaa ggtggagaag
121 ccctgccaca gggcagccca gcaccagtcc aggatcccca cctcatcaag gtgacagtga
181 agacgcccaa agacaaggag gatttctcag ttacagacac atgcactatc cagcagctga
241 aggaagagat atctcagcgc tttaaggccc accccgatca gcttgttcta atctttgctg
301 gcaaaatcct caaggatcct gactcactgg cacagtgtgg agtgcgagat ggcctcactg
361 tccacctggt catcaagagg cagcaccgtg ccatgggcaa tgagtgccca gctgcctctg
421 tccctaccca gggcccaagt cctggatcac tccctcagcc aagctccatt tacccagcag
481 atgggccccc tgcctttagc ttaggtctcc tcacaggcct cagtaggctg ggcttggcct
541 atcgtggctt ccctgaccag ccaagctccc tgatgcggca gcatgtgtct gtgcctgagt
601 ttgtgactca gctcattgat gaccccttca tcccgggtct gctgtccaac acaggcctag
661 tacgccagct ggttcttgac aacccccata tgcagcagct gatccagcac aaccctgaga
721 ttgggcatat tcttaacaac ccggaaatta tgcggcagac actggagttt ttacgtaacc
781 ctgccatgat gcaggagatg atacgtagcc aggaccgggt gctcagtaac ttggagagca
841 ttcctggtgg ctacaatgtg ctttgcacta tgtacacaga tattatggac ccaatgctta
901 acgcagtcca ggagcagttt ggcggcaatc cctttgccac tgccactact gataatgcca
961 ccaccaccac cagccaacct tcaaggatgg agaattgtga ccctctcccc aacccctgga
1021 cttctacaca tggaggctca ggtagcaggc aaggaaggca ggatggggat caggatgcac
1081 ctgacattag aaataggttt ccaaactttc tgggtattat aaggctctat gactatctcc
1141 agcaattaca cgagaacccc cagtccctag gaacttatct acaggggact gcatctgccc
1201 tcagccaaag ccaggaacca ccaccatcag taaacagagt tcccccatcg tcaccctcat
1261 ctcaggagcc tgggtcaggc cagcctctcc ccgaggagtc agtagcaatc aagggaaggt
1321 cctcctgccc agctttcctg agatacccca cagagaacag tactggacaa ggtggagacc
1381 aagatggtgc agggaaaagc tctactggac atagcacaaa cttgcctgat cttgtctcgg
1441 ggctgggaga ttctgccaac agggttccat ttgctccctt atctttttcc cccacggcag
1501 ccattcctgg aatccctgag cctccctggc tgccatcccc ggcttatcca agatctctga
1561 ggccagatgg catgaatcca gctccacagt tacaggatga gatacaacca cagctgccac
1621 tgctgatgca ccttcaggca gccatggcaa acccccgtgc cctgcaagcc ctgcggcaga
1681 ttgagcaggg tctacaggtc ctagctactg aagcacctcg cctcctactc tggttcatgc
1741 cttgcctagc agggacgggt agtgtggcag gaggtataga gtctagagaa gatcccctta
1801 tgtctgagga tcctctccca aatccacctc ctgaggtgtt cccagcactg gactctgcag
1861 agctgggctt cctttcccct ccctttctcc atatgctgca agatttagtt agtacaaatc
1921 cccagcagct gcagcctgag gctcactttc aggtgcagct ggagcaactg cggtccatgg
1981 gctttctgaa tcgtgaagcc aatcttcagg ccctcattgc tacggggggc gacgtggatg
2041 ctgctgtgga gaagctgaga cagtcgtagg agccttattc attcaaacca tacgttttcc
2101 tctgtgcctt tttcccatat cctagttccc tagctctccc atttttgaat acagctgcat
2161 tataaaccaa atttactatg aagtcctttg ctgtggaggc aatgttgttc cagagtcaac
2221 gaggaagact aatggccaaa acatagtgga ggtgctatgt gtgagtcaac cacttgtacc
2281 actataccac tggggggccc cagtctaagc tctgcttatg cctatcttga gatgcaatta
2341 cacccaattt ccaatgtgaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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