LOCUS BC036742 3257 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens phospholipase A2, group VI (cytosolic,
calcium-independent), mRNA (cDNA clone MGC:45156 IMAGE:5166749),
complete cds.
ACCESSION BC036742
VERSION BC036742.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3257)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3257)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52486193.
FEATURES Location/Qualifiers
source 1..3257
/db_xref="H-InvDB:HIT000094589"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45156 IMAGE:5166749"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3257
/gene="PLA2G6"
/gene_synonym="CaI-PLA2"
/gene_synonym="GVI"
/gene_synonym="INAD1"
/gene_synonym="iPLA2"
/gene_synonym="PLA2"
/gene_synonym="PNPLA9"
/db_xref="GeneID:8398"
/db_xref="HGNC:HGNC:9039"
/db_xref="MIM:603604"
CDS 131..2551
/gene="PLA2G6"
/gene_synonym="CaI-PLA2"
/gene_synonym="GVI"
/gene_synonym="INAD1"
/gene_synonym="iPLA2"
/gene_synonym="PLA2"
/gene_synonym="PNPLA9"
/codon_start=1
/product="phospholipase A2, group VI (cytosolic,
calcium-independent)"
/protein_id="AAH36742.2"
/db_xref="GeneID:8398"
/db_xref="HGNC:HGNC:9039"
/db_xref="MIM:603604"
/translation="MQFFGRLVNTFSGVTNLFSNPFRVKEVAVADYTSSDRVREEGQL
ILFQNTPNRTWDCVLVNPRNSQSGFRLFQLELEADALVNFHQYSSQLLPFYESSPQVL
HTEVLQHLTDLIRNHPSWSVAHLAVELGIRECFHHSRIISCANCAENEEGCTPLHLAC
RKGDGEILVELVQYCHTQMDVTDYKGETVFHYAVQGDNSQVLQLLGRNAVAGLNQVNN
QGLTPLHLACQLGKQEMVRVLLLCNARCNIMGPNGYPIHSAMKFSQKGCAEMIISMDS
SQIHSKDPRYGASPLHWAKNAEMARMLLKRGCNVNSTSSAGNTALHVAVMRNRFDCAI
VLLTHGANADARGEHGNTPLHLAMSKDNVEMIKALIVFGAEVDTPNDFGETPTFLASK
IGRLVTRKAILTLLRTVGAEYCFPPIHGVPAEQGSAAPHHPFSLERAQPPPISLNNLE
LQDLMHISRARKPAFILGSMRDEKRTHDHLLCLDGGGVKGLIIIQLLIAIEKASGVAT
KDLFDWVAGTSTGGILALAILHSKSMAYMRGMYFRMKDEVFRGSRPYESGPLEEFLKR
EFGEHTKMTDVRKPKVMLTGTLSDRQPAELHLFRNYDAPETVREPRFNQNVNLRPPAQ
PSDQLVWRAARSSGAAPTYFRPNGRFLDGGLLANNPTLDAMTEIHEYNQDLIRKGQAN
KVKKLSIVVSLGTGRSPQVPVTCVDVFRPSNPWELAKTVFGAKELGKMVVDCCTDPDG
RAVDRARAWCEMVGIQYFRLNPQLGTDIMLDEVSDTVLVNALWETEVYIYEHREEFQK
LIQLLLSP"
BASE COUNT 713 a 1046 c 906 g 592 t
ORIGIN
1 ccgttcccca acttcctcgg cgctccggac tcccaagtct ccgccggacc ctcctttgga
61 tattcctcgt gtctccgatt ctgagacaga gggggaagac ggtggggcct ccccacctgc
121 cccgcagaag atgcagttct ttggccgcct ggtcaatacc ttcagtggcg tcaccaactt
181 gttctctaac ccattccggg tgaaggaggt ggctgtggcc gactacacct cgagtgaccg
241 agttcgggag gaagggcagc tgattctgtt ccagaacact cccaaccgca cctgggactg
301 cgtcctggtc aaccccagga actcacagag tggattccga ctcttccagc tggagttgga
361 ggctgacgcc ctagtgaatt tccatcagta ttcttcccag ctgctaccct tctatgagag
421 ctcccctcag gtcctgcaca ctgaggtcct gcagcacctg accgacctca tccgtaacca
481 ccccagctgg tcagtggccc acctggctgt ggagctaggg atccgcgagt gcttccatca
541 cagccgtatc atcagctgtg ccaattgcgc ggagaacgag gagggctgca cacccctgca
601 cctggcctgc cgcaagggtg atggggagat cctggtggag ctggtgcagt actgccacac
661 tcagatggat gtcaccgact acaagggaga gaccgtcttc cattatgctg tccagggtga
721 caattctcag gtgctgcagc tccttggaag gaacgcagtg gctggcctga accaggtgaa
781 taaccaaggg ctgaccccgc tgcacctggc ctgccagctg gggaagcagg agatggtccg
841 cgtgctgctg ctgtgcaatg ctcggtgcaa catcatgggc cccaacggct accccatcca
901 ctcggccatg aagttctctc agaaggggtg tgcggagatg atcatcagca tggacagcag
961 ccagatccac agcaaagacc cccgttacgg agccagcccc ctccactggg ccaagaacgc
1021 agagatggcc cgcatgctgc tgaaacgggg ctgcaacgtg aacagcacca gctccgcggg
1081 gaacacggcc ctgcacgtgg cggtgatgcg caaccgcttc gactgtgcca tagtgctgct
1141 gacccacggg gccaacgcgg atgcccgcgg agagcacggc aacaccccgc tgcacctggc
1201 catgtcgaaa gacaacgtgg agatgatcaa ggccctcatc gtgttcggag cagaagtgga
1261 caccccgaat gactttgggg agactcctac attcctagcc tccaaaatcg gcagacttgt
1321 caccaggaag gcgatcttga ctctgctgag aaccgtgggg gccgaatact gcttcccacc
1381 catccacggg gtccccgcgg agcagggctc tgcagcgcca catcatccct tctccctgga
1441 aagagctcag cccccaccga tcagcctaaa caacctagaa ctacaggatc tcatgcacat
1501 ctcacgggcc cggaagccag cgttcatcct gggctccatg agggacgaga agcggaccca
1561 cgaccacctg ctgtgcctgg atggaggagg agtgaaaggc ctcatcatca tccagctcct
1621 catcgccatc gagaaggcct cgggtgtggc caccaaggac ctgtttgact gggtggcggg
1681 caccagcact ggaggcatcc tggccctggc cattctgcac agtaagtcca tggcctacat
1741 gcgcggcatg tactttcgca tgaaggatga ggtgttccgg ggctccaggc cctacgagtc
1801 ggggcccctg gaggagttcc tgaagcggga gtttggggag cacaccaaga tgacggacgt
1861 caggaaaccc aaggtgatgc tgacagggac actgtctgac cggcagccgg ctgaactcca
1921 cctcttccgg aactacgatg ctccagaaac tgtccgggag cctcgtttca accagaacgt
1981 taacctcagg cctccagctc agccctcaga ccagctggtg tggcgggcgg cccgaagcag
2041 cggggcagct cctacttact tccgacccaa tgggcgcttc ctggacggtg ggctgctggc
2101 caacaacccc acgctggatg ccatgaccga gatccatgag tacaatcagg acctgatccg
2161 caagggtcag gccaacaagg tgaagaaact ctccatcgtt gtctccctgg ggacagggag
2221 gtccccacaa gtgcctgtga cctgtgtgga tgtcttccgt cccagcaacc cctgggagct
2281 ggccaagact gtttttgggg ccaaggaact gggcaagatg gtggtggact gttgcacgga
2341 tccagacggg cgggctgtgg accgggcacg ggcctggtgc gagatggtcg gcatccagta
2401 cttcagattg aacccccagc tggggacgga catcatgctg gatgaggtca gtgacacagt
2461 gctggtcaac gccctctggg agaccgaggt ctacatctat gagcaccgcg aggagttcca
2521 gaagctcatc cagctgctgc tctcaccctg agggtcccca gcctctcacc ggccccagct
2581 gacctcgtcc attcagcccc tgccaggcca agcccagcca ctgccctccc gggcagatct
2641 gggcccaggc acctctgagt ccatagacca ggcctgggag aatgccaagc tgcctgcccg
2701 aggctggtcc tgaaggcctg tctcccacta accttccagc actttctgtc attccaggct
2761 gggaaagtct agagccccct ttggcccctt tccctgactg tcaaggacaa ctgactcccc
2821 catcagctca aacattaagg gtacccgggc acaaccgtac ccctgccccc agccccagcc
2881 tccctgaggg cctgccgggc tgcctctgcc ccagccccca gcaagggcac tcccaggctt
2941 cctggtgggt gcagcccact ccctctgccc tctgctccgt tccctggggg ctgggactaa
3001 agaaatgggt gtcccccacc ccatcagctg ggaaagccca ggccgcagga gtgggatgcc
3061 cgttggactt tgcccctcac actggcccag cccctcacac tgccccaccc cgagaaccct
3121 cagctctcaa aggtcactcc tgggagtttc ttcttcccaa tggaagtggc ttaagagcca
3181 aaactgaaat aaatcatttg gattcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaaaaaaa aaaaaaa
//