LOCUS BC036656 3466 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens zinc finger protein 84, mRNA (cDNA clone MGC:33120
IMAGE:4828620), complete cds.
ACCESSION BC036656
VERSION BC036656.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3466)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3466)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: b Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4508036.
FEATURES Location/Qualifiers
source 1..3466
/db_xref="H-InvDB:HIT000094549_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33120 IMAGE:4828620"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3466
/gene="ZNF84"
/gene_synonym="HPF2"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
CDS 566..2782
/gene="ZNF84"
/gene_synonym="HPF2"
/codon_start=1
/product="zinc finger protein 84"
/protein_id="AAH36656.1"
/db_xref="GeneID:7637"
/db_xref="HGNC:HGNC:13159"
/translation="MTMLQESFSFDDLSVDFTQKEWQLLDPSQKNLYKDVMLENYSSL
VSLGYEVMKPDVIFKLEQGEEPWVGDGEIPSSDSPEVWKVDGNMMWHQDNQDKLKIIK
RGHECDAFGKNFNLNMNFVPLRKSNSEGDLDGLILKHHLDLLIPKGDYGKAESDDFNV
FDNFFLHSKPEDTDTWLKYYDCDKYKESYKKSQIIIYHRNRLGEKLYECSECRKRFSK
KPSLIKHQSRHIRDIAFGCGNCGKTFPQKSQFITHHRTHTGEKPYNCSQCGKAFSQKS
QLTSHQRTHTGEKPYECGECGKAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNL
INHQRIHTGEKPFECRECGKAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIR
HQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISHQ
MTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRI
HTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQRTHT
GEKPYECRDCEKAFSQKSQLNTHQRIHAGEKPYECSLCRKAFFEKSELIRHLRTHTGE
KPYECNECRKAFREKSSLINHQRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKP
YGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKKS"
BASE COUNT 1131 a 676 c 840 g 819 t
ORIGIN
1 agcgggcttc gggaatggcg ggggaggcgc gcgggagtgg ccgcggggag cttcggcttc
61 aaggccctgg gcgtccgcgc gcggatgcgg gtctggggcg ggttggggct gggccgggtc
121 gtgaagatgc cgtgggccgc ggagctgcgc ggattctggg ctgtggggcg ggcacggcct
181 ttccggaggc gccgctcctg ggcgtccttt caggcgggcg tggaggcgcc agcctcgggc
241 gcgtttagcc tcgacctcgg gccagcccgc ttgccgcgcc gtggccctaa ggagcggctg
301 ccctgctgga ccgcatccac cagcagcctg gctctgccgc tatcgaagga ggcttttaaa
361 gcgctggggt tacagtccac agatcctggt ccctacaaat aagcctgctc atgtgagata
421 agaaaggagt tcctggaacc aggaattcat tctcagtgta gaagacctag ctgagacctc
481 actccacagt tttggggcag aagcagaaga gacgcacagt agaaccgatc tcagccttgc
541 tgatcatctc gtacagcagc agaaaatgac catgttacag gagtcattct catttgacga
601 tttatctgtg gacttcaccc aaaaggagtg gcagctactg gatccctctc agaagaattt
661 atacaaggat gtgatgttgg agaactatag cagcctagtg tcactggggt atgaagttat
721 gaaaccagat gtcatcttca aattggagca aggagaagag ccgtgggtag gagatggaga
781 aattccaagt tcagattctc cagaagtctg gaaagtagat ggtaacatga tgtggcacca
841 ggataaccaa gacaagctta aaattataaa aagaggtcat gaatgtgatg catttggaaa
901 aaatttcaat ctgaacatga actttgttcc tttaaggaaa tcaaacagtg aaggtgactt
961 agatggattg attttaaaac atcatttaga tttgcttatt ccaaaaggag attatggaaa
1021 agcagaatca gatgacttta atgtgtttga taattttttt ctccattcca agcctgagga
1081 tactgatacc tggttaaaat actatgactg tgataaatat aaagagagct ataaaaagtc
1141 acagattatc atatatcata gaaatcgttt aggggagaaa ctctatgaat gcagtgaatg
1201 taggaagcgc ttcagtaaga aaccaagtct cattaaacat cagagcagac atataagaga
1261 catagccttt ggctgtggta attgtggcaa aacctttccc cagaagtctc agtttattac
1321 acatcacaga actcatacag gagaaaaacc ttataattgt agccagtgtg ggaaagcctt
1381 ctcccaaaag tcacagctca catcccatca gcggacacat acaggagaga aaccttatga
1441 gtgtggtgaa tgtgggaaag ccttctcccg gaagtcacat ctcatatcgc attggagaac
1501 acacacagga gagaaaccct atggatgcaa tgaatgtggg agggccttta gtgaaaagtc
1561 caatctcatt aaccatcaga gaattcatac cggtgagaag ccttttgaat gcagggaatg
1621 tgggaaagcc ttcagcagga agtcacaact cgttacacat cacagaactc acacaggaac
1681 aaaacccttt ggatgtagtg attgtagaaa agccttcttt gagaagtcag agcttattag
1741 acatcagaca attcatactg gagagaaacc ctatgaatgc agcgagtgta ggaaagcatt
1801 tagagagagg tcgagtctca ttaatcatca gagaacacat acaggagaga aacctcatgg
1861 atgcattcag tgtgggaagg ccttctccca gaagtcacat ctcatatcac atcagatgac
1921 acacacagga gaaaaaccct ttatatgcag taaatgtggg aaagccttca gcaggaaatc
1981 acagctcgtt agacatcaga gaactcatac gggagaaaaa ccgtatgaat gcagtgagtg
2041 tgggaaagct ttcagtgaaa aattaagtct cactaatcat caaagaattc atacaggaga
2101 aaaaccatat gtatgcagtg aatgtgggaa agccttttgt cagaagtcac atctcatatc
2161 acatcagagg acacatacag gggagaaacc ctatgaatgc agtgaatgtg ggaaggcctt
2221 tggtgagaag tcaagtcttg caactcatca gagaactcat actggagaaa aaccgtatga
2281 atgcagggac tgtgaaaaag ctttctccca gaaatcacag ctaaataccc atcagagaat
2341 tcacgctgga gagaaaccct atgaatgcag tctttgtagg aaagcttttt ttgagaagtc
2401 ggagctaatt agacatctga gaactcatac aggagaaaaa ccttatgaat gcaatgaatg
2461 tagaaaagcc ttcagggaga agtcaagtct catcaatcat cagagaatac atacaggaga
2521 gaagcctttt gaatgcagtg agtgtggcaa agctttctct cggaagtcac accttatacc
2581 acatcaaagg acacatacgg gtgagaaacc ctatggatgc agtgaatgta ggaaggcctt
2641 ctctcagaag tcacagctgg ttaatcatca gagaattcat acaggagaga agccttatcg
2701 atgcattgaa tgtgggaaag ctttctcaca gaagtcacag ctcatcaatc atcagagaac
2761 tcatacagta aaaaaatcct aggaatacag ttaatagtag tctttgacag atcatcttgg
2821 acttcaggaa atgcaattat gataacgttt gtagacagtc acgtcatgtt aggtgtctgt
2881 actccatgag gatgagaact ctaaatgagg tggtgtatgg aaagccgatc ataattcata
2941 gagtagagtg aacctatgac tgcagtggat ctcaaaaact tttaaaacca tagacaagcc
3001 ttatagagta gaacattcac agcaaagaag aatcctgtga atgtccaaaa gccttccaga
3061 agtcaagtct cttaagctat tagaaatatt cccactgggg atgagggaaa accccatgaa
3121 tgcgggaaat gaggcaatat ttttaagaaa tgacagttca ttgtacataa gaaaatgctc
3181 ttaggaatga agttctatga aagtactaaa tatgggacag tgcaacaagt aaccagacta
3241 ttttgtattt tggagaattc atattatgga gaacctaaca atttaaagac actgggaaca
3301 cttgcccctc agtatagtac tgtcaaggga agccatacac tttttgtaga catgggtacc
3361 aaaaataccc aattctaagt ggttgacaga tgttcacttt gaagtgtgaa gttttaaaaa
3421 tacgtgaata aattggttat tgaaacatct aaaaaaaaaa aaaaaa
//