LOCUS BC036647 2996 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens chromosome 10 open reading frame 79, mRNA (cDNA clone
MGC:26001 IMAGE:4825754), complete cds.
ACCESSION BC036647
VERSION BC036647.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036647.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51339292.
FEATURES Location/Qualifiers
source 1..2996
/db_xref="H-InvDB:HIT000051750"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26001 IMAGE:4825754"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2996
/gene="C10orf79"
/gene_synonym="bA373N18.2"
/gene_synonym="FLJ22944"
/gene_synonym="FLJ36006"
/db_xref="GeneID:80217"
CDS 117..2939
/gene="C10orf79"
/gene_synonym="bA373N18.2"
/gene_synonym="FLJ22944"
/gene_synonym="FLJ36006"
/codon_start=1
/product="C10orf79 protein"
/protein_id="AAH36647.2"
/db_xref="GeneID:80217"
/translation="MAQGRERDEGPHSAGGASLSVRWVQGFPKQNVHFVNDNTICYPC
GNYVIFINIETKKKTVLQCSNGIVGVMATNIPCEVVAFSDRKLKPLIYVYSFPGLTRR
TKLKGNILLDYTLLSFSYCGTYLASYSSLPEFELALWNWESSIILCKKSQPGMDVNQM
SFNPMNWRQLCLSSPSTVSVWTIERSNQEHCFRARSVKLPLEDGSFFNETDVVFPQSL
PKDLIYGPVLPLSAIAGLVGKEAETFRPKDDLYPLLHPTMHCWTPTSDLYIGCEEGHL
LMINGDTLQVTVLNKIEEESPLEDRRNFISPVTLVYQKEGVLASGIDGFVYSFIIKDR
SYMIEDFLEIERPVEHMTFSPNYTVLLIQTDKGSVYIYTFGKEPTLNKVLDACDGKFQ
AIDFITPGTQYFMTLTYSGEICVWWLEDCACVSKIYLNTLATVLACCPSSLSAAVGTE
DGSVYFISVYDKESPQVVHKAFLSESSVQHVVYDQQGIFLLVGTAEGKVFIINANSSS
SFQIIGFTEVAKDILQISTVSLLETDIVEVMVLSSLPEAGRSRLEMFTLPTLLPQVST
TFADERGRLKDEIIHKYLYELEHALSSAVLGFQSNQIYGFCSQVPYICSYLLPEEEHT
GIYILKPYKKVQSRQYGPGLLYLSSHGLWLITIAKCGILCIRDVYTLETFAWCRSHSH
QGHGIQSMRISMDGQNILVNGRDDGTLVYLKWKRFGGHLASEILDYYQKLLISLSSAM
DKENHYLSTTPKVSVDLGSDSEHTKQKASTDLSQDELVLTDVKKEIPWIQQKSQEAIK
KEVNLFSKKRKEIKQGIKSLSKTILNMMEENDKLENIAKLDQQEFGLDLEELERLHDE
SQEEVAKMIKDVEMHNLAKSYLAELIKEECWNSMAVKGRALKCFHIPCVVENFPMKAR
TVEELKELERVLQQKKIEAECLKVLF"
BASE COUNT 913 a 601 c 690 g 792 t
ORIGIN
1 acgggtgtac acagcagcgg cgccgcggcc cgcagccccg cggcggcgga aaggtaaccg
61 acccgccctg gggtgctgcg tgcgctgcct gctcccgcct gaggaaaaca ctgcccatgg
121 cgcaaggccg ggagcgcgac gaaggccccc actccgccgg cggcgcgtcc ttgtccgtga
181 gatgggtgca aggatttcct aagcagaatg ttcattttgt caacgacaac accatttgct
241 acccttgtgg gaattatgta atatttatta atattgaaac caagaaaaag actgtactgc
301 agtgtagtaa tggaattgtg ggcgtcatgg caactaacat cccctgtgaa gttgtggctt
361 tttctgaccg gaagctaaaa cctctcatct acgtatacag ctttccagga ttgaccagaa
421 ggaccaaatt gaaaggcaac attctcctgg actacacttt actttcattc agttactgtg
481 gcacctacct ggctagttac tcctctctcc cagaatttga actggccctt tggaactggg
541 aatcgagtat cattttgtgt aagaaatcac agcctggaat ggatgtgaac caaatgtctt
601 ttaaccccat gaactggcgc cagctgtgct tatcaagtcc aagtacagtg agcgtgtgga
661 ccattgaaag aagtaaccag gagcattgtt tcagagcaag gtcggtgaaa ttacctctag
721 aagatgggtc attttttaat gaaacggatg tcgttttccc ccagtcgttg ccgaaagatc
781 tcatctatgg tcccgtgctg ccactgtcag ccattgccgg gctggtaggc aaagaggcag
841 agactttccg gccgaaagat gatctatatc ctttgcttca cccgactatg cattgctgga
901 ctccaacaag tgacttgtac attggctgtg aagagggtca tcttttaatg attaatggag
961 acaccttgca agtgactgta cttaataaga tagaagagga atcgccattg gaagacagaa
1021 gaaattttat cagtccagta accttggtat atcagaagga gggcgtgctg gcttctggaa
1081 ttgatggctt tgtgtattct tttattatta aagatagaag ttacatgatc gaggattttc
1141 ttgagattga aagacctgta gaacatatga cattttctcc caattataca gtgttgctga
1201 ttcaaacaga caagggatct gtttatatct acacttttgg taaggagcca accttaaata
1261 aagtcctaga tgcttgtgat gggaaatttc aggcaattga ctttatcaca cctggaaccc
1321 aatacttcat gacacttaca tattcagggg aaatttgtgt ttggtggctg gaggattgtg
1381 cttgtgtaag caagatttat ctgaataccc tagcaacggt tctggcttgc tgtccatcct
1441 ccctctctgc agccgtgggc acggaggatg gctcggtcta cttcatcagc gtatatgata
1501 aggaatcccc tcaggtcgtg cacaaggcct ttctctcgga atcgtccgtg cagcacgtcg
1561 tttatgatca gcaaggaata tttctgttag ttggaacagc agaaggaaaa gtctttatta
1621 tcaatgccaa ctcctcaagc tcatttcaga ttattggatt cacagaggtg gccaaagaca
1681 ttttacagat atccacagtg tctcttttag aaacagacat agtggaagtg atggtgcttt
1741 cctcgcttcc agaagcaggg agaagcaggt tggagatgtt cacactgcct acattactgc
1801 cacaagtttc cacaaccttt gctgatgaaa gaggaaggct gaaagatgaa atcattcata
1861 agtacctgta tgagttggag cacgctctgt cctctgcagt cttgggcttt caaagtaacc
1921 aaatatatgg cttctgtagt caagtgccat acatctgtag ctaccttctt cctgaagaag
1981 aacataccgg tatctacatt cttaaaccat acaaaaaagt acaaagcaga cagtatggac
2041 ctggactgct ctatctgtct tcacatggat tgtggctcat aacaatagct aaatgtggaa
2101 ttctgtgtat ccgagacgtt tatactttgg aaacatttgc ttggtgtcgg agtcattctc
2161 accagggtca tgggattcag tcaatgagaa tttcaatgga tggacaaaac attctggtga
2221 atgggagaga tgatggcacc cttgtctacc taaagtggaa gcgatttgga ggacacctag
2281 ccagtgaaat tctggactat taccagaaac tattaatttc cctgagcagc gccatggaca
2341 aggagaatca ttatttaagc acaacaccaa aagtttccgt agatttggga tccgattctg
2401 aacacacaaa acagaaggca agcactgact tatcacaaga tgaattagtt ctaaccgatg
2461 ttaagaagga aattccttgg atacaacaaa aaagccaaga ggccatcaaa aaggaggtta
2521 atctgttttc caagaaaagg aaagagataa aacaaggaat caaatcactt tccaaaacta
2581 ttctgaatat gatggaagaa aatgacaaac tagaaaatat tgcaaaatta gaccaacagg
2641 aatttggtct ggatcttgag gaactagaaa ggcttcatga tgaaagtcag gaagaagtgg
2701 caaagatgat aaaggatgta gagatgcata acttagccaa gagctatttg gctgaactta
2761 tcaaagaaga atgttggaat tcgatggctg tgaaaggtcg agctcttaag tgttttcata
2821 tcccctgtgt ggttgaaaac ttcccaatga aagcgcgcac ggttgaagag ctgaaagaat
2881 tggaaagagt tttacagcaa aagaagattg aagcagagtg tcttaaagta ctattttaaa
2941 tatacatgtg tttatataag tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//