LOCUS BC036538 3837 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens synaptotagmin IV, mRNA (cDNA clone MGC:33834 IMAGE:5260337), complete cds. ACCESSION BC036538 VERSION BC036538.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3837) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3837) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC036538.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: f Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222118. FEATURES Location/Qualifiers source 1..3837 /db_xref="H-InvDB:HIT000051736" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33834 IMAGE:5260337" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3837 /gene="SYT4" /gene_synonym="HsT1192" /gene_synonym="KIAA1342" /db_xref="GeneID:6860" /db_xref="HGNC:HGNC:11512" /db_xref="MIM:600103" CDS 99..1376 /gene="SYT4" /gene_synonym="HsT1192" /gene_synonym="KIAA1342" /codon_start=1 /product="synaptotagmin IV" /protein_id="AAH36538.1" /db_xref="GeneID:6860" /db_xref="HGNC:HGNC:11512" /db_xref="MIM:600103" /translation="MAPITTSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSK SNKTPPYKFVHVLKGVDIYPENLNSKKKFGADDKNEVKNKPAVPKNSLHLDLEKRDLN GNFPKTNLKPGSPSDLENATPKLFLEGEKESVSPESLKSSTSLTSEEKQEKLGTLFFS LEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNRE IIKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHA KKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEDISVEFLVLDSERGSRNEVIGQLV LGAAAEGTGGEHWKEICDYPRRQIAKWHVLCDG" BASE COUNT 1228 a 651 c 772 g 1186 t ORIGIN 1 gttttcagcg ctccgaaagc cggcgcttga gatccaggca agtgaatcca gccaggcagt 61 tttcccttca gcacctcgga cagaacacgc agtaaaaaat ggctccgatc accaccagcc 121 gggaagaatt tgatgaaatc cccacagtgg tggggatctt cagtgcattt ggcctggtct 181 tcacagtctc tctctttgca tggatctgct gtcagagaaa atcatccaag tctaacaaga 241 ctcctccata caagtttgtg catgtgctta agggagttga tatttaccct gaaaacctaa 301 atagcaaaaa gaagtttgga gcagatgata aaaatgaagt aaagaataag ccagctgtgc 361 caaagaattc attgcatctg gatcttgaaa agagagatct caatggcaat tttcccaaaa 421 ccaacctcaa acctggcagt ccttctgatc tggagaatgc aaccccgaag ctctttttag 481 aaggggaaaa agagtcagtt tcccctgaga gtttaaagtc cagcacttcc cttacttcag 541 aagagaaaca agagaagctg ggaactctct tcttctcctt agaatacaac ttcgagagaa 601 aagcatttgt ggtcaatatc aaggaagccc gtggcttgcc agccatggat gagcagtcga 661 tgacctctga cccatatatc aaaatgacga tcctcccaga gaagaagcat aaagtgaaaa 721 ctagagtgct gagaaaaacc ttggatccag cttttgatga gacctttaca ttctatggga 781 taccctacac acaaatccaa gaattggcct tgcacttcac aattttgagt tttgacaggt 841 tttcaagaga tgatatcatt ggggaagttc taattcctct ctcgggaatt gaattatctg 901 aaggaaaaat gttaatgaat agagagatca tcaagagaaa tgttaggaag tcttcaggac 961 ggggtgagtt actgatctct ctctgctatc agtccaccac aaacactcta actgtggttg 1021 tcttaaaagc tcgacatctg cctaaatctg atgtgtccgg actttcagat ccctatgtca 1081 aagtgaacct gtaccatgcc aaaaagagaa tctccaagaa gaagactcat gtgaagaaat 1141 gcacccccaa tgcagtgttc aatgagctgt ttgtctttga tattccttgt gagggccttg 1201 aagatataag tgttgaattt ttggttttgg attctgaaag ggggtcccga aatgaggtaa 1261 tcgggcagtt agtcttgggt gcagcagcag aaggaactgg tggagagcac tggaaagaga 1321 tctgtgacta ccccaggaga caaattgcca agtggcacgt gctctgtgat ggttagcatc 1381 ctagccgtga gttggaactt aaaggttttt actaggcaag gagaaatttt ctttctttct 1441 atattggatt gcaagcttgg gaaatcaagc tacctttttg ttgttgttgt tgttgctaga 1501 aatggattga attagtagac cagaaagtaa cttcaaatgt gtattatgat aatttcccta 1561 tttattagaa gagttggata aattttcata agatattcaa tatctccttc agattaccag 1621 tgatataact aggaatagtc agacatttta tgaatactgt gccagaatcc caaattataa 1681 atgtgacaat ctcattggaa catgtcacaa aaagttaatg tgattaagat ttaaaaacga 1741 aaagtatgcc ttgccttgtg aaaatttatc catttatctt caggttgggg aaatcaattt 1801 ttctttaaat ccaaagatac taaaaaaatg tcctccagtt tgtatttatt aattctgtca 1861 tgtgcaaatg gttgtcctgc atataaaagt atctggtcat ttcagtttgg tttgtaatta 1921 tttgatgcaa ttttatcata agagtaactc agattcattt caaaaggaca gtgaacaagc 1981 tgagaaatta ttttatcaaa gggctgagtt gagaacactg tggctgaaat ataatttttc 2041 tcccccctaa ggttacatgt gagtcaaaat tttgtaaaat ataacctcac ataagaacca 2101 tggccttgga ttattcactg cctgtcacaa gcctcagtgt ggcctgagaa atccctatgt 2161 acctttgtga aattgttgaa ttagttagtg aataaagaaa taaacttcaa ctagaaatcc 2221 agttagaagt gcaattttct tataggaaat aggtatagtg tgcaagtgta cttttaaggc 2281 catcgtttgt acccagagtc ggcatggcca cctaagtctt catttaattt attgtccccc 2341 agaaaagatt aagatgctac ttgaaaagac tgtgaagatt ttttacattg ccagataaaa 2401 agtgttactt aaccaacaaa caaatgtaag actacaaaat cgttcaagag caattctaat 2461 ataatttaca tatgttcacg caaaatatgc ttaggctgtc aaattagcac aacaaagaat 2521 gtgtttcact atcttttcta ggctaatttg tcttgagctg ttgtctatag agcagtttac 2581 agacttgtgt cttgtatcat tttccagtgc cagggttctg aaattcattc agaacctgtt 2641 agattaaagc tgcaccctgt gattatttga aaagaattag cttgagagta atgtcactat 2701 atttgagttc ttagagaagt atgagtggaa cttgagtaca gttgaattat taaatatgca 2761 agttagaaat taagtctact gaaaaattta cattttgagt caggttttgt gtcagtactt 2821 tagcagtttt tgagaatgtg tttgatatca cagtgtttgt aaattctatg aaaaatgcat 2881 tttccaaaca acttatacat gctttttatg actatgccta atgtaaagaa aatgtattac 2941 attctgtatg tacaaagatt aaaaatcaac ctcttttttg tgctttaaaa tgactttggg 3001 attaaaaaag catatttccc aatcattgtc ttcattccac tacaaagtca cctcacagca 3061 tcttgctcca ctcggcatct ctgtgaaagc aacatgaaat gaactgtagt aggtgtgtag 3121 tttggggaag tcaaatggcc attttatgta tgtgcatttg gtatcatggg ccgtggaaca 3181 gaatatatgt tggacctctg aaaagttgta aggggccaat tctaagtatt cttcacggca 3241 gccagaagtt aatggtggta gcagctgagg tatggttgtt ggacgaggcc gatttttttt 3301 tttaacatgg aacaatgaaa ccaacaacaa acatttttaa aattaaaatg gataatttgt 3361 aaatagtttt tagcttttaa aatttaaagt gtttttgagt gtgaaaagtt gagtaaaact 3421 atttgcaact ggttttcaga aaagagaaaa gaaacaacaa aggaattgaa acaggcaggg 3481 agatcttaat acctaatttc atcatttctg aaaatgtact gttttagaat gtattacaat 3541 atcaatgtga atatcttgaa tcctgttaca aatcctgcac tgtattaaac atgtaaatta 3601 attgtttgtc tgattagcca atctcaccac ccaaatgggg aggtatacat gtttgaagaa 3661 ctgtgtaact cagtaattga tttgttctga tgttgtaact caatagaagt gttttggaag 3721 gaagcatggt gtgtgagaca gtgtctgttc ttttgtgcca gctctgtatg atgtttgtaa 3781 gaccatgttt gtaagacatg aataaattgc tgcttttgcc caaaaaaaaa aaaaaaa //