LOCUS BC036524 3146 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens deleted in colorectal carcinoma, mRNA (cDNA clone
IMAGE:4837261), partial cds.
ACCESSION BC036524
VERSION BC036524.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3146)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3146)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: d Column: 8.
FEATURES Location/Qualifiers
source 1..3146
/db_xref="H-InvDB:HIT000333982"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4837261"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3146
/gene="DCC"
/gene_synonym="CRC18"
/gene_synonym="CRCR1"
/db_xref="GeneID:1630"
/db_xref="HGNC:HGNC:2701"
/db_xref="IMGT/GENE-DB:2701"
/db_xref="MIM:120470"
CDS <1..2319
/gene="DCC"
/gene_synonym="CRC18"
/gene_synonym="CRCR1"
/codon_start=1
/product="DCC protein"
/protein_id="AAH36524.1"
/db_xref="GeneID:1630"
/db_xref="HGNC:HGNC:2701"
/db_xref="IMGT/GENE-DB:2701"
/db_xref="MIM:120470"
/translation="SGVPVIKWKKDGIHLALGMDERKQQLSNGSLLIQNILHSRHHKP
DEGLYQCEASLGDSGSIISRTAKVAVAGPLRFLSQTESVTAFMGDTVLLKCEVIGEPM
PTIHWQKNQQDLTPIPGDSRVVVLPSGALQISRLQPGDIGIYRCSARNPASSRTGNEA
EVRILSDPGLHRQLYFLQRPSNVVAIEGKDAVLEGCVSGYPPPSFTWLRGEEVIQLRS
KKYSLLGGSNLLISNVTDDDSGMYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYA
YESMDIEFECTVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQC
VAENEAGNAQTSAQLIVPKPAIPSSSVLPSAPRDVVPVLVSSRFVRLSWRPPAEAKGN
IQTFTVFFSREGDNRERALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWGPGESSQP
IKVATQPELQVPGPVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ
NIEVDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDVPSAPPQNVSLE
VVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGS
QYSFQVSAMTVNGTGPPSNWYTAETPENDLDESQVPDQPSSLHVRPQTNCIIMSWTPP
LNPNIVVRGYIIGYGVGSPYAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAGEGV
PLYESATTRSITVRRHNISKLHSNRPQTKHNV"
BASE COUNT 906 a 720 c 710 g 810 t
ORIGIN
1 agcggagttc cagtgatcaa gtggaagaaa gatggcattc atctggcctt gggaatggat
61 gaaaggaagc agcaactttc aaatgggtct ctgctgatac aaaacatact tcattccaga
121 caccacaagc cagatgaggg actttaccaa tgtgaggcat ctttaggaga ttctggctca
181 attattagtc ggacagcaaa agttgcagta gcaggaccac tgaggttcct ttcacagaca
241 gaatctgtca cagccttcat gggagacaca gtgctactca agtgtgaagt cattggggag
301 cccatgccaa caatccactg gcagaagaac caacaagacc tgactccaat cccaggtgac
361 tcccgagtgg tggtcttgcc ctctggagca ttgcagatca gccgactcca accgggggac
421 attggaattt accgatgctc agctcgaaat ccagccagct caagaacagg aaatgaagca
481 gaagtcagaa ttttatcaga tccaggactg catagacagc tgtattttct gcaaagaccg
541 tccaatgtag tagccattga aggaaaagat gctgtcctgg aaggttgtgt ttctggctat
601 cctccaccaa gttttacctg gttacgaggc gaggaagtca tccaactcag gtctaaaaag
661 tattctttat tgggtggaag caacttgctt atctccaatg tgacagatga tgacagtgga
721 atgtatacct gtgttgtcac atataaaaat gagaatatta gtgcctctgc agagctcaca
781 gtcttggttc cgccatggtt tttaaatcat ccttccaacc tgtatgccta tgaaagcatg
841 gatattgagt ttgaatgtac agtctctgga aagcctgtgc ccactgtgaa ttggatgaag
901 aatggagatg tggtcattcc tagtgattat tttcagatag tgggaggaag caacttacgg
961 atacttgggg tggtgaagtc agatgaaggc ttttatcaat gtgtggctga aaatgaggct
1021 ggaaatgccc agaccagtgc acagctcatt gtccctaagc ctgctatccc aagctccagt
1081 gtcctccctt cggctcccag agatgtggtc cctgtcttgg tttccagccg atttgtccgt
1141 ctcagctggc gcccacctgc agaagcgaaa gggaacattc aaactttcac ggtctttttc
1201 tccagagaag gtgacaacag ggaacgagca ttgaatacaa cacagcctgg gtcccttcag
1261 ctcactgtgg gaaacctgaa gccagaagcc atgtacacct ttcgagttgt ggcttacaat
1321 gaatggggac cgggagagag ttctcaaccc atcaaggtgg ccacacagcc tgagttgcaa
1381 gttccagggc cagtagaaaa cctgcaagct gtatctacct cacctacctc aattcttatt
1441 acctgggaac cccctgccta tgcaaacggt ccagtccaag gttacagatt gttctgcact
1501 gaggtgtcca caggaaaaga acagaatata gaggttgatg gactatctta taaactggaa
1561 ggcctgaaaa aattcaccga atatagtctt cgattcttag cttataatcg ctatggtccg
1621 ggcgtctcta ctgatgatat aacagtggtt acactttctg acgtgccaag tgccccgcct
1681 cagaacgtct ccctggaagt ggtcaattca agaagtatca aagttagctg gctgcctcct
1741 ccatcaggaa cacaaaatgg atttattacc ggctataaaa ttcgacacag aaagacgacc
1801 cgcaggggtg agatggaaac actggagcca aacaacctct ggtacctatt cacaggactg
1861 gagaaaggaa gtcagtacag tttccaggtg tcagccatga cagtcaatgg tactggacca
1921 ccttccaact ggtatactgc agagactcca gagaatgatc tagatgaatc tcaagttcct
1981 gatcaaccaa gctctcttca tgtgaggccc cagactaact gcatcatcat gagttggact
2041 cctcccttga acccaaacat cgtggtgcga ggttatatta tcggttatgg cgttgggagc
2101 ccttacgctg agacagtgcg tgtggacagc aagcagcgat attattccat tgagaggtta
2161 gagtcaagtt cccattatgt aatctcccta aaagctttta acaatgccgg agaaggagtt
2221 cctctttatg aaagtgccac caccaggtct ataaccgtca gaagacacaa catctctaag
2281 ttacacagca acaggcctca aaccaaacac aatgtatgaa ttctcggtca tggtaacaaa
2341 aaacagaagg tccagtactt ggagcatgac tgcacatgcc accacgtatg aagcagcccc
2401 cacctctgct cccaaggact tgacagtcat tactagggaa gggaagcctc gtgccgtcat
2461 tgtgagttgg cagcctccct tggaagccaa tgggaaaatt actgcttaca tcttatttta
2521 taccttggac aagaacatcc caattgatga ctggattatg gaaacaatca gtggtgatag
2581 gcttactcat caaatcatgg atctcaacct tgatactatg tattactttc gaattcaagc
2641 acgaaattca aaaggagtgg ggccactctc tgatcctatc ctcttcagga ctctgaaagt
2701 ggaacaccct gacaaaatgg ctaatgacca aggtatggtg gctcaatctg tcattttgtg
2761 ttccttgaat caatcctgtc tgttagacat gtcagtcatt actttatatt cctcttttca
2821 cctggaccat acacctgatg aagcagacac tggcgtgacg attaatcttg ttaatgaagt
2881 tctgcttggc tgaggctgcg gctctgataa ggaagatgta aattttcttg agaggaaatt
2941 gttttgtctc cattctgaag gaccaattaa aatgtcaagc ttctttgtat gaaataaatt
3001 tttagtctct gtctgcactt ctgaataatt cacattaagt ataattaagc tcagcataat
3061 tttcaagctg ctcttgcacc ctttcctgag ctatggatta aagttctgta gctctacaga
3121 gaaaacccgc aaaaaaaaaa aaaaaa
//