LOCUS BC036518 3749 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens galactosylceramidase, mRNA (cDNA clone MGC:33117 IMAGE:5267705), complete cds. ACCESSION BC036518 VERSION BC036518.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3749) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3749) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC036518.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 47 Row: l Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557612. FEATURES Location/Qualifiers source 1..3749 /db_xref="H-InvDB:HIT000051725" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33117 IMAGE:5267705" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3749 /gene="GALC" /db_xref="GeneID:2581" /db_xref="HGNC:HGNC:4115" /db_xref="MIM:606890" CDS 8..2017 /gene="GALC" /codon_start=1 /product="GALC protein" /protein_id="AAH36518.1" /db_xref="GeneID:2581" /db_xref="HGNC:HGNC:4115" /db_xref="MIM:606890" /translation="MTAAAGSAGRAAVPLLLCALLAPGGAYVLDDSDGLGREFDGIGA VSGGGATSRLLVNYPEPYRSQILDYLFKPNFGASLHILKVEIGGDGQTTDGTEPSHMH YALDENYFRGYEWWLMKEAKKRNPNITLIGLPWSFPGWLGKGFDWPYVNLQLTAYYVV TWIVGAKRYHDLDIDYIGIWNERSYNANYIKILRKMLNYQGLQRVKIIASDNLWESIS ASMLLDAELFKVVDVIGAHYPGTHSAKDAKLTGKKLWSSEDFSTLNSDMGAGCWGRIL NQNYINGYMTSTIAWNLVASYYEQLPYGRCGLMTAQEPWSGHYVVESPVWVSAHTTQF TQPGWYYLKTVGHLEKGGSYVALTDGLGNLTIIIETMSHKHSKCIRPFLPYFNVSQQF ATFVLKGSFSEIPELQVWYTKLGKTSERFLFKQLDSLWLLDSDGSFTLSLHEDELFTL TTLTTGRKGSYPLPPKSQPFPSTYKDDFNVDYPFFSEAPNFADQTGVFEYFTNIEDPG EHHFTLRQVLNQRPITWAADASNTISIIGDYNWTNLTTKCDVYIETPDTGGVFIAGRV NKGGILIRSARGIFFWIFANGSYRVTGDLAGWIIYALGRVEVTAKKWYTLTLTIKGHF ASGMLNDKSLWTDIPVNFPKNGWAAIGTHSFEFAQFDNFLVEATR" BASE COUNT 1053 a 728 c 794 g 1174 t ORIGIN 1 aaaagctatg actgcggccg cgggttcggc gggccgcgcc gcggtgccct tgctgctgtg 61 tgcgctgctg gcgcccggcg gcgcgtacgt gctcgacgac tccgacgggc tgggccggga 121 gttcgacggc atcggcgcgg tcagcggcgg cggggcaacc tcccgacttc tagtaaatta 181 cccagagccc tatcgttctc agatattgga ttatctcttt aagccgaatt ttggtgcctc 241 tttgcatatt ttaaaagtgg aaataggtgg tgatgggcag acaacagatg gcactgagcc 301 ctcccacatg cattatgcac tagatgagaa ttatttccga ggatacgagt ggtggttgat 361 gaaagaagct aagaagagga atcccaatat tacactcatt gggttgccat ggtcattccc 421 tggatggctg ggaaaaggtt tcgactggcc ttatgtcaat cttcagctga ctgcctatta 481 tgtcgtgacc tggattgtgg gcgccaagcg ttaccatgat ttggacattg attatattgg 541 aatttggaat gagaggtcat ataatgccaa ttatattaag atattaagaa aaatgctgaa 601 ttatcaaggt ctccagcgag tgaaaatcat agcaagtgat aatctctggg agtccatctc 661 tgcatccatg ctccttgatg ccgaactctt caaggtggtt gatgttatag gggctcatta 721 tcctggaacc cattcagcaa aagatgcaaa gttgactggg aagaagcttt ggtcttctga 781 agactttagc actttaaata gtgacatggg tgcaggctgc tggggtcgca ttttaaatca 841 gaattatatc aatggctata tgacttccac aatcgcatgg aatttagtgg ctagttacta 901 tgaacagttg ccttatggga gatgcgggtt gatgacggcc caggagccat ggagtgggca 961 ctacgtggta gaatctcctg tctgggtatc agctcatacc actcagttta ctcaacctgg 1021 ctggtattac ctgaagacag ttggccattt agagaaagga ggaagctacg tagctctgac 1081 tgatggctta gggaacctca ccatcatcat tgaaaccatg agtcataaac attctaagtg 1141 catacggcca tttcttcctt atttcaatgt gtcacaacaa tttgccacct ttgttcttaa 1201 gggatctttt agtgaaatac cagagctaca ggtatggtat accaaacttg gaaaaacatc 1261 cgaaagattt ctttttaagc agctggattc tctatggctc cttgacagcg atggcagttt 1321 cacactgagc ctgcatgaag atgagctgtt cacactcacc actctcacca ctggtcgcaa 1381 aggcagctac ccgcttcctc caaaatccca gcccttccca agtacctata aggatgattt 1441 caatgttgat tacccatttt ttagtgaagc tccaaacttt gctgatcaaa ctggtgtatt 1501 tgaatatttt acaaatattg aagaccctgg cgagcatcac ttcacgctac gccaagttct 1561 caaccagaga cccattacgt gggctgccga tgcatccaac acaatcagta ttataggaga 1621 ctacaactgg accaatctga ctacaaagtg tgatgtttac atagagaccc ctgacacagg 1681 aggtgtgttc attgcaggaa gagtaaataa aggtggtatt ttgattagaa gtgccagagg 1741 aattttcttc tggatttttg caaatggatc ttacagggtt acaggtgatt tagctggatg 1801 gattatatat gctttaggac gtgttgaagt tacagcaaaa aaatggtata cactcacgtt 1861 aactattaag ggtcatttcg cctctggcat gctgaatgac aagtctctgt ggacagacat 1921 ccctgtgaat tttccaaaga atggctgggc tgcaattgga actcactcct ttgaatttgc 1981 acagtttgac aactttcttg tggaagccac acgctaatac ttaacagggc atcatagaat 2041 actctggatt ttcttccctt ctttttggtt ttggttcaga gccaattctt gtttcattgg 2101 aacagtatat gaggcttttg agactaaaaa taatgaagag taaaagggga gagaaattta 2161 tttttaattt accctgtgga agattttatt agaattaatt ccaaggggaa aactggtgaa 2221 tctttaacat tacctggtgt gttccctaac attcaaactg tgcattggcc atacccttag 2281 gagtggtttg agtagtacag acctcgaagc cttgctgcta acactgaggt agctctcttc 2341 atcttatttg caagcggtcc tgtagatggc agtaacttga tcatcactga gatgtattta 2401 tgcatgctga ccgtgtgtcc aagtgagcca gtgtcttcat cacaagatga tgctgccata 2461 atagaaagct gaagaacact agaagtagct ttttgaaaac cacttcaacc tgttatgctt 2521 tatgctctaa aaagtatttt ttttattttc ctttttaaga tgatactttt gaaatgcagg 2581 atatgatgag tgggatgatt ttaaaaatgc ctctttaata aactacctct aacactattt 2641 ctgtggtaat agatattagc agattaattg ggttatttgc attatttaat ttttttgatt 2701 ccaagttttg gtcttgtaac cactataact ctctgtgaac atttttccag gtggctggaa 2761 gaaggaagaa aacctgatat agccaatgct gttgtagtcg tttcctcagc ctcatctcac 2821 tgtgctgtgg tctgtcctca catgtgcact ggtaacagac tcacacagct gatgaatgct 2881 tttctctcct tatgtgtgga aggaggggag cacttagaca tttgctaact cccagaattg 2941 gatcatctcc taagatgtac ttacttttta aagtccaaat atgtttatat ttaaatatac 3001 gtgagcatgt tcatcatgtt gtatgattta tactaagcat taatgtggct ctatgtagca 3061 aatcagttat tcatgtaggt aaagtaaatc tagaattatt tataagaatt actcattgaa 3121 ctaattctac tatttaggaa tttgtaagag tctaacatag gcttagctac agtgaagttt 3181 tgcattgctt ttgaagacaa gaagataagt gctagaataa ataagattac agagaaaatt 3241 ttttgttaaa accaagtgat ttccagctga tgtatctaat attttttaaa acgaacatta 3301 tagaggtgta atttatttac aataaaatgt tcctacttta aatatacaat tcagtgagtt 3361 ttgataaatt gatataccca tgtaaccaac actccagtca agcttcagaa tatttccatc 3421 accccagaag gttctcttgt atacctgctc agtcagttcc tttcactccc gattgttggc 3481 agccattgat aggaattcta tcactatagg ttagttttct ttgttccaga acatcatgaa 3541 agcggcgtca tgtactgtgt attcttatga atggtttctt tccatcagca taatgatttg 3601 agatttgtcc atgttgtgtg attcagtggt ttgttccttc ttatttctga agagttttcc 3661 attgtatgaa tataccacaa tttgtttcct ccccaccagt ttctgatact acaattaaaa 3721 ctgtctacat ttacaaaaaa aaaaaaaaa //