LOCUS BC036497 2554 bp mRNA linear HTC 09-SEP-2005
DEFINITION Homo sapiens transcriptional adaptor 1 (HFI1 homolog, yeast)-like,
mRNA (cDNA clone IMAGE:5264296), with apparent retained intron.
ACCESSION BC036497
VERSION BC036497.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2554)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2554)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: j Column: 21
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2554
/db_xref="H-InvDB:HIT000094444"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5264296"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 771 a 455 c 495 g 833 t
ORIGIN
1 agcgggattt ctagagagac atgtctgatt taaaaagaga tgttcaatat aaagtagttt
61 tatacttgga aaatggaaaa ataaccatgt tgttttcata atatcaattt caaacaggga
121 caaaccatct tcactacaaa atcttttata ttagccttaa gcaaaaggta ctggggcata
181 actccaggtg gtgatggaga acatgaatgg gctatcagaa tctccctgag gaaggctgag
241 attttatgaa tgaaaaagac tgagaaaaat agtcatgact gtatcttagg ttctgtgttg
301 agaattctaa gtagaaaata acagcaatta agtagttact ctacatagca ttatcttgga
361 atatttgtta ctagatctgc catattggtt agctaggctt tttaagattt aattgaatca
421 ttcattatat gtttatactt ttagaaccta cttacggtta gatttaaaat gctctgattt
481 gtttgaatat agttcaatac ttctccttct ctttcagtta tttttaacac agtgccatac
541 attctgtgat caccaaggta ttaattgaat agaataaact actacgcaaa ctaccattat
601 tccccttaat ccatgtcttc attattacct tgtattggat gtgaatctgt gattatttgt
661 gcatgaatta actctttttt cccttaaccc ctgtggtata gttttggtgg cattaatttg
721 gaggatctca acttcagtac aggagtttac tttgtgtctt gtttgctact gtaatgagta
781 attttaaaaa gtttttctta ctcatagcat agattccagc ctcaaaatcc tctctcagga
841 gcccagcaat ttgtggcaaa ggatccccaa gatgatgacg acttgaaact ttgttcccac
901 acaatgatgc ttcccactcg aggccagctt gaagggagaa tgatagtgac tgcttatgag
961 catgggctgg acaatgtcac cgaggaggct gtttcagctg ttgtctatgc tgtggagaat
1021 caccttaaag atatactgac gtcagttgtg tcaagaagga aagcttatcg gttacgagat
1081 ggtcatttta aatatgcatt tggcagtaac gtgaccccgc agccatacat gaagaatagt
1141 gtagtagctt acaacaactt aatagaaagc cctccagctt ttactgctcc ctgtgctggt
1201 cagaatccag cttctcaccc accccctgat gatgctgagc agcaggctgc actcctgctg
1261 gcatgctccg gagacactct acctgcatct ttgcctccgg tgaacatgta cgatcttttt
1321 gaagctttgc aggtgcacag ggaagtcatc cctacacata ctgtctatgc tcttaacatt
1381 gaaaggatca tcacgaaact ctggcatcca aatcatgaag agctgcagca agacaaagtt
1441 caccgccagc gcttggcagc caaggagggg cttttgctgt gctaaattag gatttgaggg
1501 tgtgggaccc tcaccgaatt cattgattac tgaaaattga atgttttttg ggtccacatt
1561 tcaaggctga agtgtatagt gtatatataa cctttcctat ggaaatgtga cattgagtac
1621 attttgtgtt gctgttgtga agccattaat ataaatcttt ggtaatgacc catatctcta
1681 tatgtatgtg ttcccagttg tgggagcagg cactaatgaa atcctgtgcc tggaatggag
1741 atatttaggt acctgaggct tagtgtcctg tggtctgcat gtaagataga tgacatccta
1801 gaacaaagaa gctgttttaa cttaatcccc ctgatcagca ggatatctgt gtgttcagtg
1861 acatcataca ttctgtatct agaagtctaa aatttctgcc tttctcctaa agaatgtgtt
1921 cttgcatttt ggttgaaata acctacacag tgttaaaaat cagatgcctc ctttagtgac
1981 cagttcaaat tttaatagcg ataggtagcc cctgagaaat ttatcactat aactccacag
2041 gaaatatgac ttggaagtgc tctgtgtact aaacaaaata aagcccctct ttgcatttaa
2101 aaccaaagtc aaaacaaaac tcttgtaatg caattaatta actttatgtc ttcccatgac
2161 tcaagttttg ttaaatatgc ccaaaaactt tgattggcag tttcttcggt taattattcc
2221 tatagaatgt attttaagaa atctatacaa attggatata tgcttggtaa ttctccagtt
2281 tctaggaggt acctatttct accgtttcaa gtgatgaagt gaaaataatt taccttcgat
2341 agtgttactg ataacaaacc tacttaagag atatgttgct ttttacttaa gggatagtgt
2401 tgatagataa attagaatgt atagataggt ttgtgaaagt ctaaataatg gttgtataga
2461 tatgtatata tggttcacat atctggatct gtgtatttga ttttgtactt taaatgtgac
2521 aaataaacct tttgggagaa aaaaaaaaaa aaaa
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