LOCUS BC036489 4808 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens paraneoplastic antigen MA2, mRNA (cDNA clone MGC:43166
IMAGE:5262276), complete cds.
ACCESSION BC036489
VERSION BC036489.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4808)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4808)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: f Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676176.
FEATURES Location/Qualifiers
source 1..4808
/db_xref="H-InvDB:HIT000094438"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43166 IMAGE:5262276"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4808
/gene="PNMA2"
/gene_synonym="KIAA0883"
/gene_synonym="MA2"
/gene_synonym="MM2"
/gene_synonym="RGAG2"
/db_xref="GeneID:10687"
/db_xref="HGNC:HGNC:9159"
/db_xref="MIM:603970"
CDS 701..1795
/gene="PNMA2"
/gene_synonym="KIAA0883"
/gene_synonym="MA2"
/gene_synonym="MM2"
/gene_synonym="RGAG2"
/codon_start=1
/product="paraneoplastic antigen MA2"
/protein_id="AAH36489.1"
/db_xref="GeneID:10687"
/db_xref="HGNC:HGNC:9159"
/db_xref="MIM:603970"
/translation="MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLK
SLGRYRLLGKIFRKQENANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEF
LERLNLFLEKEGQTVSGMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPM
RYRKLRVFSGSAVPAPEEESFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLM
HIVQADNPSISVEECLEAFKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLL
RRAVEKRAIPRRIADQVSLEQVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREE
EEEEASFENESIEEPEERDGYGRWNHEGDD"
BASE COUNT 1299 a 1043 c 1149 g 1317 t
ORIGIN
1 agcggggtcc ggaagtgaag cggccagacc accagctaat ggatgcgaag cggagggccc
61 gctgaccgct ctccgcgcct ggagcagctt ggcttggctg gagctaagag ccagacacac
121 cactgtgtgg aggtgggtga tgtcttcctg tgctaaaagg tgaataaata agctcctcac
181 ctctcgcgga acactcggga acacatcaac aggggtccaa gccgccctgc tgggaggctt
241 ctcttcaaga gttctgggtc ccagagtgga aggcattttc ccatcaactg gagagagacg
301 aaacatcaga gaccaggagg ctgtggagaa agcagctgtc ccaggtgcct caactatcag
361 agaagggtca gcgtcacgtg gctgccagca tctttgagaa aatcactggc aatcggactt
421 cagagctgcg ggcacaggtg tggttagaac tgagatacga cctgcccacc tgggtcaggc
481 ctaaagacaa gaagtcctga gttcttgcca ctgagtaggc cagggtcatt tgtccagaaa
541 actttgtgac tgtctttgag tgacctagtc tgggacccat tcattggtgg gttctaaggt
601 tagaagctca tccaggatat tttcaatatt aagtcagtgc atagctgcac cactaacaaa
661 ttggtgcctg tagagtcaga gtgggtcaat tcttaggaca atggcgctgg cactgttaga
721 ggactggtgc aggataatga gtgtggatga gcagaagtca ctgatggtta cggggatacc
781 ggcggacttt gaggaggctg agattcagga ggtccttcag gagactttaa agtctctggg
841 caggtataga ctgcttggca agatattccg gaagcaggag aatgccaatg ctgtcttact
901 agagcttctg gaagatactg atgtctcggc cattcccagt gaggtccagg gaaagggggg
961 tgtctggaag gtgatcttta agacccctaa tcaggacact gagtttcttg aaagattgaa
1021 cctgtttcta gaaaaagagg ggcagacggt ctcgggtatg tttcgagccc tggggcagga
1081 gggcgtgtct ccagccacag tgccctgcat ctcaccagaa ttactggccc atttgttggg
1141 acaggcaatg gcacatgcgc ctcagcccct gctacccatg agataccgga aactgcgagt
1201 attctcaggg agtgctgtcc cagccccaga ggaagagtcc tttgaggtct ggttggaaca
1261 ggccacggag atagtcaaag agtggccagt aacagaggca gaaaagaaaa ggtggctggc
1321 ggaaagcctg cggggccctg ccctggacct catgcacata gtgcaggcag acaacccgtc
1381 catcagtgta gaagagtgtt tggaggcctt taagcaagtg tttgggagcc tagagagccg
1441 caggacagcc caggtgaggt atctgaagac ctatcaggag gaaggagaga aggtctcagc
1501 ctatgtgtta cggctagaaa ccctgctccg gagagcggtg gagaaacgcg ccatccctcg
1561 gcgtattgcg gaccaggtca gcctggagca ggtcatggct ggggccactc ttaaccagat
1621 gctgtggtgc cggcttaggg agctgaagga tcagggcccg ccccccagct tccttgagct
1681 aatgaaggta atacgggaag aagaggagga agaggcctcc tttgagaatg agagtatcga
1741 agagccagag gaacgagatg gctatggccg ctggaatcat gagggagacg actgaaaacc
1801 acctgggggc aggacccaca gccagtgggc taagaccttt aaaaaatttt tttctttaat
1861 gtatgggact gaaatcaaac catgaaagcc aattattgac cttccttcct tccttccttc
1921 cctcccttcc tccttctctc cttctctcct cctctctcct ctcctctcct ctctttcctt
1981 ccttccttcc ttttttcttt ttctctttct tctttatttc ttgggtctca ctctcatcac
2041 ccaggctaga gtgcagtggc acaaaaatct cggctcactg cagccttgac ttcccaggct
2101 caggctcagg tgatcctcac accttagcct cccaagtacc tgggactaca ggcacgcacc
2161 accatgccta gctattcttt tgtatttttg gtagagacag ggttttgctg tgttgctcag
2221 gctggtctgg aacccctagg ctcaaatgat gtgcccaact cggcctccca aagtgctggg
2281 attacaggca tgaaccgcca tgcctggccc ttgatttttc tttttaagaa aaaaatatct
2341 aggagtttct tagaccctat gtagattatt aatgaacaaa agattagact ccaaatatta
2401 aatagtaagc ctgaaggaat ctgaaacact tgtacttcca attttcttta aataatccca
2461 aatagaccag aattggccaa taccatagaa gaaagaattg gcagtcaaaa aaaaaaatac
2521 cttttgtaat gtttgaaaaa taaagctgtt tgacttgtca ggtgttttcc tttctcaaat
2581 cagcaaattc tctctgagtg cctggctttg tgagacactg tacaaggagt tacaagacta
2641 cagctataac ctgcagttga gcagttataa acctacaaaa tgggccctgc cctcagagag
2701 gttccagtct agatgaggag ctgatctaga caggtaaaag gctaactaac cctttgtgta
2761 aataagttca tcaccccagt aaaagtgtca tcacccagtg aataggacca cctctgcctg
2821 cagatttttg ttgttgttgt tgtcattgtt gttgttgttt taacctggga agtgttcttc
2881 ctgcctttct gctaggtgtc agatagatgg tcccagagct aggtgctgtg tcaggccctg
2941 aagacacaga tgactcaacc taagctttac tttccagagg tccacagcct gagaggtgtc
3001 cccaaagaaa gggggacatg aggggactgc atgcttgaga gcagggttgt ttagggcagg
3061 tttggattta gtgagcaggc tggtttgctt agagaaggct tttagtggca acaaaggatg
3121 aagaggagag aaaaggaact cacatttatt gaaggcctac tgtgtgcaaa gtgtttcatg
3181 tatatctcat tgaatgtata cagccaccct gttgtggtat aattttgctc tttataaaga
3241 gaaagaccga agctcagatg agttaagtgg tctcctcaac accaaaatgc caagaagtga
3301 tggagcctag acagaagcac agaactttct gactcacact agtccatcct ctaccatcac
3361 gatgactttc aaattgtgct ctgcagttct gcagattttc tagcagtgcc atctccaaaa
3421 tgtgttttaa actctttatt tttttaatta ttattagtat tattttgaga ctgagtcttg
3481 ctctatcacc caggctggag tgcagtggtg caatctcagc tcactgcaac ctccgcctcc
3541 caggttcaag cgatttcgtg cctcagcctc ccgagtagct gggattacag gcacccacca
3601 ccacgcccag ctaatttttg tatttttagt agaaatgggg tttcaccatg ttggccaggc
3661 tggtctcgaa ctcctgacct caagtgatcc actcacctcg gcctcccaaa gtgctgggat
3721 tacaggtgtg agccaccatg cctgggctaa actctttaag tctctagtaa atgcagctag
3781 attcaaatgg gctgataacc aaattttaac acatcagcat tcaccaccag gtttactttt
3841 attttcagat tggctcattt tgtgcagacc ttagagcaaa gtttccttta tggtatctgt
3901 gtacgtatcc aaacttcttt taattgttca cagattttaa aagcagtagc accacatggt
3961 tgtgtagatc agacctgtgt atttagatca gacctgtgta tcacgtaagt gtgtgagtgc
4021 agtgcagatg agcaccattt agttatatgt gctaggcaaa tctccaacac agttgatgtg
4081 tagtcttgtg gtagatttgt gcatactgta agcaaattgc ttagcttctc tagacatcag
4141 tttccacatc tgaaaaataa gaagatgaga gtacacggtt gttatgaaca aatgacttaa
4201 tgctttttaa gcacgttgca tgacatctgg aacacagaaa gccctcaata cattgaagct
4261 cttaggattt tcacgatgtt cctgtctgct caatgcatgc ttctttattg ttctgacagt
4321 tgtgtggtaa caagctaata tgcttccagt tgacttccag tctaccctag tgttagaaac
4381 cgtttcatct cttattgtaa atttgagtgc ttgttgtttt ttatatttgt gatgactctt
4441 ccagcagttg ttgacaattg ttagaggttt gacttttaaa taattactta ttttttctga
4501 ttgtggttca gtttaactga agaatatcct gagattgtaa gaaaagcatt ttttaaaagg
4561 tatcacttgt gatcatttat ctttctaaat tctattttta atactgttcc accaaagtga
4621 tgcagtggtt accatgacac cctaatttca tgtgtttttg tatttatgaa aatagtttca
4681 ttgtcattta ttggcggtat acaaagtaaa atgttataaa tgtgaagtta taaaataaat
4741 atatgctaat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa agaaaaaaaa
4801 aaaaaaaa
//