LOCUS BC036487 4390 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens cDNA clone IMAGE:5261502, with apparent retained
intron.
ACCESSION BC036487
VERSION BC036487.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4390)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: e Column: 10
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4390
/db_xref="H-InvDB:HIT000094437"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5261502"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1447 a 706 c 743 g 1494 t
ORIGIN
1 agcggacctt agctggaaat gtgcatgtca ggagactaac atctttcaca tgtccccaaa
61 tgaccatgaa aacacaagta ttgatttggg gattaacaat taaattttac caagtaggca
121 aatttggaaa tatagaatct gtgaataatg aagactgaat attgaaagtc tttaaaatgt
181 ttgttactaa ctttatagta attttggtgt ttatttctca tttaacgaag acagtattca
241 aggtaagatt ttgtatcttt tcaaatgttt ggcaatttaa gaaatagaat ttgggggaat
301 agtctaaaat tttgtggctt aggatgtagt ttaatatcta acagataatt ttggaaatag
361 aaaatgtgaa ttttgattgc aattattttg aaatctttac cagattgtcc cagaagaggt
421 tcaaacaatt ggtagagaga ttgctgcaat ttatttcttt acgcctgttt cctgcaaagc
481 ctgaagaatt tccacctata acaaagtgtt cctggtggat tccatcagcc gctaaagtgt
541 tggctttact taatactgca aacaatttag ttcaccctcc ccttattcct tatactgatt
601 tctataattc tacattggat cacattgatc tcatggaaga atatcatact tggcaaaact
661 ttggaaactc tcacaggttt tccttctgtc agtacccatt cgttatttct gtagctgcaa
721 aaaaaatcat tattcagaga gactcagagc aacagatgat aaacatcgca aggcaaagtc
781 tggtggataa agtatctcga agacagagac ctgatatgaa tatattattt ctaaatatga
841 aagtaagacg gacacatctg gttagcgatt cacttgatga gctaacccgg aaaagagccg
901 atttgaaaaa gaagttaaaa gttacatttg taggggaagc tggtttggat atgggtggtt
961 tgactaaaga atggttcctt cttctaattc gccaaatttt tcatccagat tatggcatgt
1021 ttacatatca caaggattca cactgccatt ggtttagcag ctttaaatgt gataactatt
1081 ctgaattccg attggttgga attcttatgg gactagctgt ttataacagc atcaccttgg
1141 atattcgttt ccctccctgc tgttacaaga aattattgag ccctcccatc attcctagtg
1201 atcaaaatat accagtaggc atctgcaatg ttaccgtgga cgacttatgt caaattatgc
1261 ctgagttggc ccatggatta agtgaactct tatcacatga aggcaatgtt gaagaagatt
1321 tctattcaac atttcaggtt tttcaagaag aatttggaat aatcaagtcc tataatttaa
1381 agcccggtgg tgataaaatt tcagttacca atcaaaatag aaaagaatat gtacagcttt
1441 atacgacttc cttctgaaca aatccatcta taagcagttt gctgcatttt attatggatt
1501 tcatagtgtg tgtgcttcaa atgccctaat gctgcttcgt ccagaagagg ttgaaatttt
1561 ggtctgtgga agtcctgacc tggatatgca tgctctgcag agaagtactc agtatgatgg
1621 ctatgcaaaa acggacttaa ctataaaata cttttgggat gttgtgcttg gatttcctct
1681 tgatcttcaa aagaagttgc tacattttac tacagggagt gacagagtac ctgtaggagg
1741 gatggctgat ttgaacttta aaatctcaaa gaatgaaact tctactaact gcttacctgt
1801 ggcccatacc tgcttcaatc aactttgcct tcccccctac aagagcaaaa aggatctgaa
1861 acagaaattg atcattggaa tttcaaattc agaaggtttt ggacttgagt aacctagaag
1921 acttgaaata taatctttta tatgtagcat tcacttccct cttactgtgc ctttagcctt
1981 ttcatgtttc tgtctcaaaa cactttgaca aagctcacca actttaaaat attaagtttt
2041 taaaaaatca aatatgaagt atgttcagca aaggcataat tttctaaaaa cacacacaga
2101 aatcgcttga gtgaggaaaa gtccacatgg cagagacagg tatggtccag ttcctctttt
2161 atatagcact ttatcattct ccacaagtag tttgtcacag gcattccact gggaaagcaa
2221 agtacagtga agaatgaatt tatggtatag ttgaacccag tggcagattg tacactgcta
2281 gcactgctag cacacagtag caaagcaaac agctacatta tctttaacat aaggcatgta
2341 gccatatttt catatagtgg tatacaacac agtatcattg caaatgcagt ttacagggat
2401 ttttgatata ctggcttggg acctataaga ttcttctcag cagttgctga aaagcatgta
2461 aataactaca taatagcctg agaataatgg gattttgata gtgccattta ttgttaaaga
2521 tttattttta caaagtaaat tcagggtttt agatgtgtac acagctttta caaatcaata
2581 aagatgattg tacaagagta ttttcagact aattggattc aaggttatat tcttttaagt
2641 gttgttagtc tgcatgcaca ttggcagtaa actagttact tgtgtactct gtaatatttg
2701 tataatgatc atttcttctt aaggctcaag atattagaaa agaaatcaga cctaaataat
2761 cattgatgaa gtatgtcagt tacaagcaca aaagaatata actgctttta tatatctttt
2821 gaatcatgta caagacttat atctacattt tttgatcacc agttgtacca aaacactaat
2881 ttttgaaaaa gataggttaa agtatttgac aaaagtgaat acaataataa cacttgtgtc
2941 aaaatgatat agcttagtat aaaaataaaa ttcaacgttt tggccaaaat gtttgttttt
3001 cactggattc tgaatataat aaattcaaag tacccttttt ttagagtttc taataaagta
3061 gtatgtaaaa agaaactgca ttttaagtca gacagtaaat gtttttttta atttacagca
3121 aatgaagcag ttttattagc atgttacaaa tattgccaaa ccaagacttc tctaccatac
3181 tttaacagct ttccttcaga aaactctgaa gttatatttg caataataat ggaaccagca
3241 tttagtacca gcatatggtt catatgcaaa taatactttc cccaaaatct ttctgggcta
3301 ggctattttc ttgctatgct tcctgcaccc aaccagcaga attcttccag ggtggaggaa
3361 ctaatcagct tgttctccaa cagttctgaa gccaacccac aaatctttga ggaaaagggg
3421 tcactttgtt tactattctc ttggagatgg aagtgattct gctcttccat ttgggtatat
3481 tatttcaagg gtatttcttc ttaaaaatct tggaaagcct aagagagtta aaggcatcct
3541 ggttttgttt cattttgctc tgttttaaat ccatatgcaa ataaaactgc ttctctctta
3601 cactgcttga actagaaaat cagcttttta atgtaggtta ccacttataa gcacaaaaga
3661 aacatgtata agaaaccaga tttaagtgtt ttaaataaaa tgtaaacagt ttttatttgg
3721 tagagatgac tcatggaaaa attgtgttgg cttggtctgc atgtttaatg atgtgcttgt
3781 atatcgatta gctgtgtcac ttttaaataa gaagtccaca caagcaagcc aaatttttag
3841 atgacgaagt ccataaataa ctagagaatt tttgttatct gttgttaagt tgaaatgtat
3901 aatcatttat cactaaattg cacattgcct ttatttattt gtgctctgtt tttggtttac
3961 agtgtaataa tacctcattt aaaaaataaa aaccactact gttacatttt attaatttaa
4021 aaagctagaa aattcatgta gttacttttt ttacatatat aatctgttaa tgaattattg
4081 atttttgtat ctgccacagt aaattaaagc attacacagt atttatcagt attttttaaa
4141 catcctgtcc ttttttaaaa tctttgctta gtcagtcata tttttgtctg tatgattaga
4201 agtttttacg tccttccttt tttgtacaaa tctgtattgt attaatttct ggatgcaatt
4261 tttcaaatat taaaattata cagtcagtca ggcttcagtt tattttttga acacttgggc
4321 aattaattaa agccatatgt ttaaaatatt ttataaaaaa aaaaaaaaaa aaaagaaaaa
4381 aaaaaaaaaa
//