LOCUS BC036478 3873 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 171, member B, mRNA
(cDNA clone IMAGE:5260563), partial cds.
ACCESSION BC036478
VERSION BC036478.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036478.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: c Column: 11.
FEATURES Location/Qualifiers
source 1..3873
/db_xref="H-InvDB:HIT000094430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5260563"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..3873
/gene="FAM171B"
/db_xref="GeneID:165215"
/db_xref="HGNC:HGNC:29412"
CDS <1..732
/gene="FAM171B"
/codon_start=1
/product="FAM171B protein"
/protein_id="AAH36478.2"
/db_xref="GeneID:165215"
/db_xref="HGNC:HGNC:29412"
/translation="LTLPKMPIHSHAQPPDAREEDIILEGQQSLPSQASDWSRYSSSL
LESVSVTGTLNEAVVMTPFSSELQGISEQTLLELSKGKPSPHPRAWFVSLDGKPVAQV
RHSFIDLKKGKRTQSNDTSLDSGVDMNELHSSRKLEREKTFIKSMHQPKILYLEDLDL
SSSESGTTVCSPEDPALRHILDGGSGVIMEHPGEESPGRKSTVEDFEANTSPTKRRGR
PPLAKRDSKTNIWKKREERPLIPIN"
BASE COUNT 1260 a 668 c 663 g 1282 t
ORIGIN
1 ctgaccttgc ccaaaatgcc aattcattct catgcacagc ccccagatgc cagggaagag
61 gatatcatac ttgaaggtca acagagcctg ccatcccagg cttcagattg gagccgatac
121 tcaagcagct tactggaatc cgtctctgtt actggaacac taaatgaggc tgttgtaatg
181 actccatttt catcggaact tcaaggaatt tcagaacaga ccctcctgga gctgtccaaa
241 ggaaagccct ccccgcatcc cagagcctgg tttgtgtctc ttgatggaaa gccagttgca
301 caagtgaggc actcctttat agacctgaaa aagggcaaga gaacccagag caatgacacc
361 agtctggact ctggggtgga catgaatgag cttcactcaa gtagaaagct cgagagggag
421 aaaacattca tcaaaagcat gcatcagccc aagatccttt acttagaaga tttagaccta
481 agcagcagtg agagtggaac caccgtctgt tcccctgaag acccagcttt aaggcacatc
541 ctagatggag ggagtggagt gatcatggag caccctggag aagagtcgcc aggaaggaaa
601 agcactgttg aagattttga agctaataca tcccccacta aaagaagggg cagaccacca
661 ctagccaaaa gagatagcaa gactaacatc tggaagaagc gagaggaacg cccactgatt
721 cccataaatt aactccaatg gggattgtgt gtctgctgtc tcgtgctgtt tattcttgct
781 tcttgttgta aattgcagta cgaacttaag aaaatgagac tgagcaatct catggttctt
841 ggacatgtct caagcagagt aaatggtaat tcagtaatca gagagaaaga taccaaggaa
901 tgctttttct ggcctattca tttatttttg ggtgatgaat ttacagtatc taagttttca
961 aaatgtaaaa tagcttcaag atgttagtta tctgaaaatg ttgctcagcc agccagtttg
1021 gccttgactc tcttaagaat aacagtgaaa tatatactcc tcaagttgcc tccaaaaatg
1081 ttgcctctac catggtgact accccatgga acatttagaa acaaaactga cttcaggcat
1141 catattattt taaatgttac tattacgtct tcttctgcct atacttaaaa ataacttgat
1201 aaatgacttg gactgatgtt actctggagt tatcacaaag aaaatgttgt ttggtcttta
1261 aagagcatgt gtattgtatc atcccaaacg taaatcctac atttatataa gatgggcaag
1321 aagctacttg gtcattagag agggagacac cagctctttg gttgtttttg gatataactt
1381 tacaaaataa gtaagatgtt aatttagaaa tttgagaaat taatgctcta atactgagtt
1441 tttatttaaa aattattttt tcttcccctc aacaatgaag caagcttagc tgtcaaggga
1501 aactttttac aaatctgaaa aaaacaatct atgactttgg tttaaggctc actgatactt
1561 ttaggctaaa ttggttttaa tatatttctt ctattctaaa aacctgaact cagtcactta
1621 aaggctatga aatttaaaaa aaaagtcgat gtgaaagttt cttttgaaca ctaaaataaa
1681 atatgtgcag ataaaatata cattgatttg tttttcttaa atgttgatga gaagaaaaag
1741 agatgccatt ttcctgaggc tcaaaaatac cttcaggata gttgtatatc cagttattga
1801 ttttcttaaa agatgtgtaa ggaaaacagt ttcaatttca ggggaaaagt aaaagttttt
1861 ccctaagtca cttaaagcct ttgcaacttc ttttttcagt tttgtaagta atatatctat
1921 gttcttttca ttatagcaag cattcaatgt gaacaacttt ttaattaact ctgaattacc
1981 attcatacat cctaaaaata aaagctcgtt attcattaaa atcaactgat cccatttttc
2041 ttaaaatttc cctgaaggca aatgtctgaa gcacctttcc cttgtggggg taaaaatcct
2101 aaattgcttt atttttcatt ccctcctatt caacatggga gcagcataga gacccaaacc
2161 atgtaaacaa gttcagtgaa ccaaaacagc cacattagct tcagtaaaat tatagctaga
2221 tgtgcaattt tttcctccaa cttctaacgt gtcaaataac cttcctactg ttctgtgtta
2281 actgaaagaa cataaagacc ctaggcaaat atttgctata tattacccca atccatagaa
2341 gaaataatgt tttgggtaat acctaggctt cctttttttt tttttttttt tttttttagt
2401 gataaggctc ataacaatta gagaaggctt cttattggtc ttacacagaa agatacatca
2461 aaagcagcat gactcaaaat gatttggaaa aggttaaagt tagtgctctg ctgaagtgcc
2521 tttgatatag acttgcatta ttagaaggat ataacatctt ttttaagtgt gcattttctt
2581 tcagttaacc aaattaaaca gatgtgcagt tttattaaaa atatagacat agtgtttcat
2641 gttggaacaa taaatattgc atgtgagtag tatttcttgt tttttgaata cagtatatat
2701 tgataaattg tttatgttgg aatgaagtta gaaactatat agcaaaacat tatattttaa
2761 gtgtttattt ttcccacctt taaataaaaa tgtttcatct cagcttggta atgaaataca
2821 catattggta taagggtata ccattcaggt atgccactta ttttattcat ttttgtgtaa
2881 gggaaatgag atggtgtatc ccaagggctt ttctagaact acttgtttgc tttcagaata
2941 aaaccttatt attttttaca ctgcacatgc tgttctcaat tggtaattat aggcaattta
3001 tcttttctaa tgatcaaaag agtgtgactt ctcatttgtg agtagttcac aaatttcctg
3061 ttaaaaagct gaaaccatct actttttctt aacccaagtg ataataaaca atattcacaa
3121 ctttcttaaa tttttaaatt gaaaaccaag gttttttcaa atataaacct agatgatttt
3181 ggtcacaaat tgttaacatt tgtcgatcct ttgtatatac tttggatata tattaaaggc
3241 aaaactatct cttgactaac tgatggattc atttactaaa gcacagctgt atgtattttt
3301 gaatacatat tatgatcttg agactttata aatcaatttt tatgacttta tgcagttgta
3361 tagggattat gccctttcag ttctataggg attatgccct tttataatac ataatatacc
3421 acagagatta caaatgttga ggaatgaaag cacttctttg ctttggcaat cattttcaga
3481 ccactatgtg tttgaatcct ctggtatcaa tacgtattat agggttttag agatctgtgg
3541 gtcaaatgat gtccctcaaa acttcctaaa aaggtgaagc tcaaagtcac acattcattt
3601 ataaggcgca tgagtttctc attttcccat gtacgagcat tgtaaaggaa ttcagctgta
3661 ttaatttcta tttcagatct agaattgaca ttttgccttc ttgtttccag gtgtttctat
3721 tttttgtatt ctttcagaga aatctcatat ttcggtgtat ttattgctgt tactactata
3781 tttactgctg aaaactgtaa caacctgaag atttgtaaaa tgttaaacat agttcattaa
3841 aaataataaa ataaatccaa aaaaaaaaaa aaa
//