LOCUS BC036371 1887 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens actin-like 6A, mRNA (cDNA clone MGC:26443
IMAGE:4827785), complete cds.
ACCESSION BC036371
VERSION BC036371.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1887)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1887)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089996.
FEATURES Location/Qualifiers
source 1..1887
/db_xref="H-InvDB:HIT000051683"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26443 IMAGE:4827785"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1887
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
CDS 153..1442
/gene="ACTL6A"
/gene_synonym="ACTL6"
/gene_synonym="BAF53A"
/gene_synonym="MGC5382"
/codon_start=1
/product="actin-like 6A"
/protein_id="AAH36371.1"
/db_xref="GeneID:86"
/db_xref="HGNC:HGNC:24124"
/db_xref="MIM:604958"
/translation="MSGGVYGGDEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMV
VERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAI
LDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAF
ANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELV
PPYMIASKEAVREGSPANWKRKEKLPQVTRSWHNYMCNCVIQDFQASVLQVSDSTYDE
QVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSGNTMLGVSHVVTTSVG
MCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFS
SWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP"
BASE COUNT 570 a 348 c 427 g 542 t
ORIGIN
1 agcgggtgtg tggacgccgc tttgttgcct gaggtgggtg gcggtggaag ttaagggagt
61 caggggctat cgctcctcga gactcgcagt cgcggccact gcagtcactt cgccagttag
121 cccttagggt aggagtcgcg ccggcagcag ccatgagcgg cggcgtgtac gggggagatg
181 aagttggagc ccttgttttt gacattggat cctatactgt gagagctggt tatgctggtg
241 aggactgccc caaggtggat tttcctacag ctattggtat ggtggtagaa agagatgacg
301 gaagcacatt aatggaaata gatggcgata aaggcaaaca aggcggtccc acctactaca
361 tagatactaa tgctctgcgt gttccgaggg agaatatgga ggccatttca cctctaaaaa
421 atgggatggt tgaagactgg gatagtttcc aagctatttt ggatcatacc tacaaaatgc
481 atgtcaaatc agaagccagt ctccatcctg ttctcatgtc agaggcaccg tggaatacta
541 gagcaaagag agagaaactg acagagttaa tgtttgaaca ctacaacatc cctgccttct
601 tcctttgcaa aactgcagtt ttgacagcat ttgctaatgg tcgttctact gggctgattt
661 tggacagtgg agccactcat accactgcaa ttccagtcca cgatggctat gtccttcaac
721 aaggcattgt gaaatcccct cttgctggag actttattac tatgcagtgc agagaactct
781 tccaagaaat gaatattgaa ttggttcctc catatatgat tgcatcaaaa gaagctgttc
841 gtgaaggatc tccagcaaac tggaaaagaa aagagaagtt gcctcaggtt acgaggtctt
901 ggcacaatta tatgtgtaat tgtgttatcc aggattttca agcttcggta cttcaagtgt
961 cagattcaac ttatgatgaa caagtggctg cacagatgcc aactgttcat tatgaattcc
1021 ccaatggcta caattgtgat tttggtgcag agcggctaaa gattccagaa ggattatttg
1081 acccttccaa tgtaaagggg ttatcaggaa acacaatgtt aggagtcagt catgttgtca
1141 ccacaagtgt tgggatgtgt gatattgaca tcagaccagg tctctatggc agtgtaatag
1201 tggcaggagg aaacacacta atacagagtt ttactgacag gttgaataga gagctgtctc
1261 agaaaactcc tccaagtatg cggttgaaat tgattgcaaa taatacaaca gtggaacgga
1321 ggtttagctc atggattggc ggctccattc tagcctcttt gggtaccttt caacagatgt
1381 ggatttccaa gcaagaatat gaagaaggag ggaagcagtg tgtagaaaga aaatgccctt
1441 gagaaagagt tcccaagctt ctaccttcct tttgtcacct tacgtttcat agctttagta
1501 tactcaggaa aagaatgacc atcttttgta gaatgtttat acatttttgc atatttcaat
1561 ttccacttaa attttttaaa gctttaactg gctctataaa ttaagtttgt gctttccttg
1621 aaatgcactt attcttatta caagcatttt ataattttgt ataaatgtct attttctcta
1681 aatattttgc tttcagtaaa atgctttcca actctgttta gtgtattaat taccagtgga
1741 ttggtagaac tgctttttat tgactagtaa aagttactgc ctatgctttt taccttaggc
1801 ttacagaatt aaataaaaat tagccattcc agaaataaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa agaaaaaaaa aaaaaaa
//