LOCUS BC036242 2923 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens copine III, mRNA (cDNA clone MGC:39823 IMAGE:5300530),
complete cds.
ACCESSION BC036242
VERSION BC036242.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2923)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2923)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: o Column: 18.
FEATURES Location/Qualifiers
source 1..2923
/db_xref="H-InvDB:HIT000051656"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39823 IMAGE:5300530"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2923
/gene="CPNE3"
/gene_synonym="CPN3"
/gene_synonym="KIAA0636"
/gene_synonym="PRO1071"
/db_xref="GeneID:8895"
/db_xref="HGNC:HGNC:2316"
/db_xref="MIM:604207"
CDS 124..1737
/gene="CPNE3"
/gene_synonym="CPN3"
/gene_synonym="KIAA0636"
/gene_synonym="PRO1071"
/codon_start=1
/product="copine III"
/protein_id="AAH36242.1"
/db_xref="GeneID:8895"
/db_xref="HGNC:HGNC:2316"
/db_xref="MIM:604207"
/translation="MAAQCVTKVALNVSCANLLDKDIGSKSDPLCVLFLNTSGQQWYE
VERTERIKNCLNPQFSKTFIIDYYFEVVQKLKFGVYDIDNKTIELSDDDFLGECECTL
GQIVSSKKLTRPLVMKTGRPAGKGSITISAEEIKDNRVVLFEMEARKLDNKDLFGKSD
PYLEFHKQTSDGNWLMVHRTEVVKNNLNPVWRPFKISLNSLCYGDMDKTIKVECYDYD
NDGSHDLIGTFQTTMTKLKEASRSSPVEFECINEKKRQKKKSYKNSGVISVKQCEITV
ECTFLDYIMGGCQLNFTVGVDFTGSNGDPRSPDSLHYISPNGVNEYLTALWSVGLVIQ
DYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLY
GQTNFSPIINHVARFAAAATQQQTASRYFVLLIITDGVITDLDETRQAIVNASRLPMS
IIIVGVGGADFSAMEFLDGDGGSLHSPLGEVAIRDIVQFVPFRQFQNAPKEALAQCVL
AEIPQQVVGYFNTYKLLPPKNPATKQQKQ"
BASE COUNT 877 a 550 c 594 g 902 t
ORIGIN
1 gcggtcccag cgtcgctccg gacgctgcca acctgttctc caccgtcgct cgacttccac
61 ctctaagact cccacgaaac tcaggttgaa taattcgtca aattacacaa ctgaactcaa
121 gacatggctg cccagtgtgt cacaaaggtg gcgctgaatg tttcctgtgc caatcttttg
181 gataaagata tagggtcaaa gtcagaccct ttatgtgtgt tgtttttgaa tacaagtggt
241 caacagtggt atgaggttga gcgcacagaa aggattaaga attgcttgaa tccccaattt
301 tccaagacat ttattattga ttactacttt gaagtggttc agaaattgaa atttggggtt
361 tatgacatcg acaacaaaac tattgagctg agtgatgatg acttcttagg ggaatgtgaa
421 tgtacacttg gacaaattgt ttccagcaag aagctaactc gaccactggt gatgaaaact
481 ggcagacctg caggaaaagg gagcattacg atttcagctg aagaaataaa agataataga
541 gtggtcttgt ttgaaatgga agccagaaaa ctggataata aggatctatt tggaaagtca
601 gacccatacc tggaattcca caagcagaca tctgatggaa actggctaat ggttcatcgg
661 acagaggttg ttaaaaacaa cttgaatcct gtttggaggc ctttcaagat ctctcttaac
721 tcactgtgtt acggagatat ggacaaaacc attaaggtgg agtgttatga ttatgacaat
781 gatgggtcac atgatctcat tggaacattt cagaccacca tgacaaaact gaaagaagcc
841 tccagaagct cacctgttga atttgaatgc ataaatgaga aaaaaaggca aaagaaaaaa
901 agctacaaga attcaggtgt tatcagtgtg aaacagtgtg agattacagt agaatgcaca
961 ttccttgact atataatggg aggatgtcag ctgaatttta ctgtgggagt ggacttcact
1021 ggctccaatg gtgacccaag gtctccagac tcccttcatt acatcagccc caatggcgtt
1081 aatgagtatt tgactgctct ctggtctgtg ggactggtca ttcaagatta tgatgctgat
1141 aagatgtttc cagcttttgg ttttggcgct cagatacctc ctcagtggca ggtatcacat
1201 gaatttccaa tgaacttcaa cccatccaat ccctactgca atggaatcca aggcattgta
1261 gaggcgtatc ggtcttgtct tcctcagata aaactctatg gacaaactaa tttttctcca
1321 atcataaatc acgtggccag gtttgctgct gcagccacgc aacagcagac agcttctcga
1381 tattttgtgc ttttgattat tactgatggt gtgatcacag accttgatga aaccagacaa
1441 gctatagtta atgcctccag gctgcctatg tcaatcataa ttgttggagt tggaggtgct
1501 gacttcagcg ccatggagtt tctggatggt gatggtggaa gtctccactc cccattgggc
1561 gaagtggcca tcagagatat tgtccagttt gtgcctttca gacagttcca gaatgctcca
1621 aaagaagcac ttgctcagtg tgtcttggca gagattcccc agcaggtggt gggctacttc
1681 aatacataca aactccttcc tcccaagaac ccagccacga aacaacagaa gcagtgacca
1741 cttcaacaga attcttttgt gttatgtgga gcaatgccat ctctcacccc aaatcgtgta
1801 tctgtcattc tacgtacttt ttacccccag catttatgat gtaaatctct ttctctatgg
1861 attatatctg tttaaagcat tctttctagg ttattttggg gggacagtgc caagtccatc
1921 tttgcccagt caattcagtg attgatagca atttacatta attgcagtaa agctctttgg
1981 attagaaatt agtgtgggga aagcttattc tgttgttgtt tttgtttact ttcatatgat
2041 gaaaatgctg tgtttaagtg tttgtcaata ggaagaatgg aaaactgttg ggatgatgtg
2101 gtttgcaggt tgctgtgcct gattcacagt gtatgttgta taagccaatg tccatacctg
2161 attatgagag cttcttaaat tatatgatat caaatttgtt cctgtaactc tgtatacagt
2221 gcttttctgc aaggtaaaaa taacctgtct atgcatctga tttttgctac agtttagaca
2281 ctgtggttta caaaacagca tgcactcaac ttgggacttt atgaaaagta ctgaatgagc
2341 aggaaaaggc acatactcag ttttttaaat gtacaatcaa caagtaaaaa taacctcatg
2401 taagtaagcc atttttattt gcctttctag atattttatt ttattgtgga aaactgtaaa
2461 catggtcaga tttggctttt tttttcatta actgagcaag actttcagga tattgtagat
2521 gcacagatgg taggttgtcc tgaattctac attattagat tactttaatt gagatttgtt
2581 aaaacggtta ggactgtttt gtccaggaaa gataagagga caaaacatat aaggtgaaat
2641 tcagaattcc gtttccttct aactaatgaa aaactgctta ctaaaaaaaa attttatact
2701 ttccttgcta aggtcccata tattgatttg tacagatcca cttagtcatt ttctcctttt
2761 tttaagaacc attttcatct gatttttaaa ctcacgatac cagttatctg ttaatcaaaa
2821 ttgcatttta caatttaata atgtgatatt tcctatgtct acagcatacc ttattaggta
2881 taaaacctac tgcaacttag aaaaaggaaa aaaaaaaaaa aaa
//