LOCUS BC036211 2840 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens mex-3 homolog B (C. elegans), mRNA (cDNA clone
MGC:39639 IMAGE:5266259), complete cds.
ACCESSION BC036211
VERSION BC036211.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2840)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2840)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47894110.
FEATURES Location/Qualifiers
source 1..2840
/db_xref="H-InvDB:HIT000094290"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39639 IMAGE:5266259"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2840
/gene="MEX3B"
/gene_synonym="DKFZp434J0617"
/gene_synonym="MEX-3B"
/gene_synonym="RNF195"
/db_xref="GeneID:84206"
/db_xref="HGNC:HGNC:25297"
/db_xref="MIM:611008"
CDS 437..2146
/gene="MEX3B"
/gene_synonym="DKFZp434J0617"
/gene_synonym="MEX-3B"
/gene_synonym="RNF195"
/codon_start=1
/product="MEX3B protein"
/protein_id="AAH36211.1"
/db_xref="GeneID:84206"
/db_xref="HGNC:HGNC:25297"
/db_xref="MIM:611008"
/translation="MPSSLFADLERNGSGGGGGGSSGGGETLDDQRALQLALDQLSLL
GLDSDEGASLYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKT
PVRGEEPVFVVTGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQ
TTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAR
EEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTP
GRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNN
NNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPV
SSSCSSSASSSASSSSVVFPGSGASAPSNANLGLLVHRRLHPGTSCPRLSPPLHMAPG
AGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSSSSSSSSSSSSSS
GLRRKGSRDCSVCFESEVIAALVPCGHSLFCMECANRICEKSEPECPVCHTAVTQAIR
IFS"
BASE COUNT 618 a 875 c 830 g 517 t
ORIGIN
1 tcgagaggcg gggaggagag gaggaaaaag cgctgagtga gggcgggcgg gcgggcggga
61 gggagggagt ggaggagccg gggaggggct ccttaaagaa acgcttctgt cgctcgcctg
121 ctcgcttttc gctcggcatt gcggccagcc agccgggcac tcggggggca cgcgcggcca
181 ccgctagagc tctgccccca ccccacccgc cagcaggtct ggggtgggga cccaggtggg
241 ggctcctgca gccactgccc ggtgcggacc gcacggagcg acccactcct cccagcaccg
301 aggaagaagc aacggagccc tcagcaggcg accggcctcc ccgcccctga ccgcccgctt
361 cccggctgcc tttgtggccg cagcttctcg ccgccgagcc gagggccggc gggggcgcgg
421 cgcgcacggc cgagcgatgc ccagctcgct gttcgcagac ctggagcgca acggcagcgg
481 cggcggcggc ggcggcagca gcggaggggg agagaccctg gatgaccaaa gagccctgca
541 gctcgcgctc gaccagctct ccctgctggg gctggacagt gacgagggcg cctctctgta
601 cgacagcgag ccgcgcaaga agagcgtgaa catgaccgag tgcgtgccag tacccagttc
661 tgagcatgtc gccgagatcg tggggcggca aggttgtaaa atcaaagcgc tgcgggcgaa
721 gaccaatact tacatcaaga ccccagttcg cggggaggag cctgtctttg ttgtgacggg
781 caggaaggag gatgtggcca tggctcggag ggagatcatc tctgctgccg agcacttctc
841 catgatccgc gcctcccgga ataagaacac ggcactcaac ggcgcggtgc ctgggccgcc
901 caacctgccc gggcagacca ccatccaagt gcgggtaccc taccgcgtgg tggggctcgt
961 ggtggggccc aaaggcgcca caatcaagcg catccagcag cagacgcaca cgtacatcgt
1021 gacgcccagc cgggataagg agccggtgtt cgaggtgacc ggcatgccag agaacgtgga
1081 tcgcgctcga gaggagattg aggcgcacat tgctctgcgt accggcggca tcattgagct
1141 cacagacgag aacgacttcc acgccaacgg caccgatgtg ggcttcgatc tgcatcatgg
1201 gtccggcggg tccggcccag gcagcctctg gagcaagccc acccccagca tcacgcccac
1261 ccccggccgc aagcctttct ctagctaccg caacgacagc tccagctcgc ttggcagtgc
1321 ttccacagac tcttatttcg gcggcgggac cagcagcagc gcagcggcta cccagcgcct
1381 ggcggactac agccccccta gccccgccct gagctttgcg cacaacggaa acaataacaa
1441 taacggcaat gggtacacct acacagcggg gggagaagcc tcagtgccat cccccgacgg
1501 ctgccccgag ctgcagccca cttttgaccc ggctcccgct cccccacctg gggcaccact
1561 tatctgggcc cagttcgagc ggtccccggg aggcggacct gcagctccgg tatcttcttc
1621 ctgctcttct tctgcatctt cgtctgcttc ttcctcctcc gtggtcttcc ccgggagtgg
1681 cgccagtgcg ccctccaacg ccaacctggg gctattggtg caccgccggc tgcaccctgg
1741 caccagctgc ccgcgcctgt ctccaccctt gcacatggcc ccgggggcgg gagagcacca
1801 cctggctcgc cgggtgcgca gcgacccggg tggaggaggc ctggcctacg ccgcttatgc
1861 caacgggctg ggggcacagc tgcctggctt gcagccgtcg gacacgtcgg gctcctcctc
1921 ttcgtccagc tcctcctcca gctcttcatc ctcttcctcc gggcttcggc gtaaaggcag
1981 ccgcgactgc tccgtgtgct tcgagagcga agtgattgcc gcgctggtgc cctgtggcca
2041 cagcctcttc tgcatggagt gcgccaatcg catctgtgag aagagcgagc ccgagtgccc
2101 ggtctgccac accgcggtca ctcaggccat ccgcatcttt tcttaaaggc agcgggcgct
2161 gctagtgcgc accgtgctgg gggaaggggg aaccactccc catcctcttt ccccagcgct
2221 cgcctgcctc cctgggtgcc ccccctctcc cttctccttc ccggccccac caacactctg
2281 agatccgaga ggagcttgga aagctgtagt atccgctcat ttttaaaatt taatttttaa
2341 gtaaaggaat ttgccaggat atctgcatca agagtactgt agcctgggaa acctgaacac
2401 ctgaaatgca tgctctataa ataataggaa cggcgacatt ctagtaatga tagtttttac
2461 actgtactta ataggaagct tccaaaagaa gaaaacccca caagttttcc attttcttaa
2521 agtaggaaaa aatgaacagt aataattatg atgaagatga tagtagtgct atgggatgtg
2581 tggactgttt agtgtgttcc cctttgtggg tgggttccta tgatacttat tatagaacac
2641 agtggatcct ttttgaatgt tcgtggaagg gccaggagtt cctgtgaaac caggatactg
2701 cagctttatt aaagttaaag aaactgtaac atatctctta tatattaaaa acgtttaaaa
2761 gttttaaaaa ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2821 aaaaccaaaa aaaaaaaaaa
//