LOCUS BC036205 3581 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens transmembrane channel-like 7, mRNA (cDNA clone
MGC:39608 IMAGE:5261157), complete cds.
ACCESSION BC036205
VERSION BC036205.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3581)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3581)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: d Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33636690.
FEATURES Location/Qualifiers
source 1..3581
/db_xref="H-InvDB:HIT000094286"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39608 IMAGE:5261157"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3581
/gene="TMC7"
/gene_synonym="FLJ21240"
/db_xref="GeneID:79905"
/db_xref="HGNC:HGNC:23000"
CDS 60..2231
/gene="TMC7"
/gene_synonym="FLJ21240"
/codon_start=1
/product="transmembrane channel-like 7"
/protein_id="AAH36205.1"
/db_xref="GeneID:79905"
/db_xref="HGNC:HGNC:23000"
/translation="MSESSGSALQPGRPSRQQAVHPENLSLDSSCFSSPPVNFLQELP
SYRSIARRRTTVHSRDKQSGTLLKPTDSYSSQLEDRIAENLSSHSLRNYALNISEKRR
LRDIQETQMKYLSEWDQWKRYSSKSWKRFLEKAREMTTHLELWREDIRSIEGKFGTGI
QSYFSFLRFLVLLNLVIFLIIFMLVLLPVLLTKYKITNSSFVLIPFKDMDKQCTVYPV
SSSGLIYFYSYIIDLLSGTGFLEETSLFYGHYTIDEVKFQNFTYDLPLAYLLSTIASL
ALSLLWIVKRSVEGFKINLIRSEEHFQSYCNKIFAGWDFCITNRSMADLKHSSLRYEL
RADLEEERMRQKIAERTSEETIRIYSLRLFLNCIVLAVLGACFYAIYVATVFSQEHMK
KEIDKMVFGENLFILYLPSIVITLANFITPMIFAKIIRYEDYSPGFEIRLTILRCVFM
RLATICVLVFTLGSKITSCDDDTCDLCGYNQKLYPCWETQVGQEMYKLMIFDFIIILA
VTLFVDFPRKLLVTYCSSCKLIQCWGQQEFAIPDNVLGIVYGQTICWIGAFFSPLLPA
IATLKFIIIFYVKEWSLLYTCRPSPRPFRASNSNFFFLLVLLIGLCLAIIPLTISISR
IPSSKACGPFTNFNTTWEVIPKTVSTFPSSLQSFIHGVTSEAFAVPFFMIICLIMFYF
IALAGAHKRVVIQLREQLSLESRDKCYLIQKLTEAQRDMRN"
BASE COUNT 933 a 852 c 812 g 984 t
ORIGIN
1 gggggcggcg gcggctggag agggtcctcg gcagcctctg aggagcgcgg ggcgcggcca
61 tgagcgagtc cagcggcagt gcgctccagc ccggcaggcc cagccggcag caggcggtcc
121 atccagagaa cctctctcta gactccagtt gcttctcttc tccacctgtg aacttcctcc
181 aagaattgcc aagctaccgg tccattgcac gtaggagaac gactgtccat tcccgggaca
241 agcaaagcgg aactttgcta aagccaaccg actcttacag ctcccagctg gaggacagaa
301 tcgctgaaaa cctcagcagc cattctcttc gaaattatgc actgaacatc tctgagaagc
361 ggagactaag ggacattcaa gagacacaaa tgaagtatct ctccgaatgg gaccagtgga
421 agcggtatag cagcaagtct tggaagaggt tcctagagaa ggctcgagag atgacgaccc
481 acctggagct gtggcgggag gacatccgca gcatagaagg gaaatttggc actgggattc
541 agtcctattt ctccttcttg agattcctgg tgttgctgaa tttggtgata tttctgatca
601 tctttatgct ggttttgctc ccagtcttac tcacgaaata caagatcacc aacagcagct
661 tcgtgctcat tcctttcaaa gacatggata aacaatgtac agtctatcca gtaagcagtt
721 ctggactcat ttacttttac agttatatca tagacttgct ttctggcact ggtttcctgg
781 aggaaactag cctcttttac ggacattaca ccattgatga ggtgaaattt cagaacttca
841 cctatgatct gcccctggcg tatttgttaa gcacaatcgc ctccctggcc ctgagccttc
901 tttggatagt gaaaaggtcg gtggaaggat tcaaaatcaa cctgattcgg agtgaggagc
961 actttcagag ttactgcaac aagatatttg ccggctggga cttctgcatc actaaccgca
1021 gcatggcgga tctgaagcac agcagcttgc ggtacgagct ccgagcagat ctggaggaag
1081 aaagaatgcg gcagaaaata gcagaaagga cctcagaaga aacaatacgc atttactctt
1141 tgagactgtt tttgaactgt attgttctgg ctgttttagg ggcatgcttt tatgcaatat
1201 acgtagcaac tgtcttctcg caagagcaca tgaaaaagga aatcgacaag atggtttttg
1261 gagagaacct cttcatattg tatctaccgt ctattgtgat cacgctggcc aattttatca
1321 ccccaatgat ctttgccaag atcatccgct atgaggatta ttctccaggc tttgagatcc
1381 gtctgacaat ccttaggtgt gtctttatgc ggctggccac catatgtgtc ctggtgttca
1441 cgctgggctc caagatcaca tcctgtgatg atgacacatg tgacctttgc ggctacaacc
1501 agaaactcta cccgtgctgg gagacccaag ttgggcagga aatgtacaag ctgatgatct
1561 tcgacttcat catcatcttg gctgtgacac tcttcgtgga ttttcctaga aagctcctgg
1621 tgacctactg ttcctcttgc aagctgattc agtgctgggg gcagcaggag tttgccattc
1681 ctgataacgt cctggggata gtttacgggc aaaccatctg ctggatcgga gcctttttct
1741 caccccttct ccctgcaatt gcaaccctga aattcattat catcttctat gtgaaagagt
1801 ggagtctgct ttacacctgc agaccctccc ccaggccgtt cagagcatcc aattctaatt
1861 tcttcttcct gttggtgttg ttgatcgggc tgtgtttggc aataatacct ctgacaatca
1921 gcatatcacg catcccttcc tcgaaagcct gtgggccgtt caccaacttc aacaccacct
1981 gggaggtcat ccccaagaca gtgagcacct tccccagctc gctgcagtcc ttcatccatg
2041 gtgtcacatc cgaagccttt gcagttcctt tcttcatgat tatttgcctc atcatgtttt
2101 acttcattgc cttagctgga gcacacaaac gggtggtcat ccagctccga gagcagctat
2161 ccctggaaag tcgtgacaag tgctacctaa tccagaaact aacagaagcc caaagggaca
2221 tgaggaacta actagactga gcgtgaagat ggtgctgcct gttgcttcta agctgaccta
2281 gtgattctgc tgagcctaca gagtctacct gggttttgag tggacattta aaaatatatt
2341 tttcttgagt ttaggctttt ccatatgtgc agctgtgttt acctaaccca gcccttaatt
2401 agggcttcag tgacttagaa aagcagggga aacccaaggc tttgcctgca gaccggccac
2461 actgtgacaa ctctaccaaa aaccaacaag ccattcaagc ttttacaaga atgaaagagc
2521 ggagacggta gtttagtatt tgagccacga gtttatgtgc acaagtgttt tgggttgtgg
2581 actgaagctc agcctgttaa tcagaccagc ccatgagtgt ataacaaaca gaattggagg
2641 ctggtttctt aaacacacac gtccacattt tttagggttg ttttcctgtg cttacaattt
2701 ttaatgcatg tgcctttatt tcacaaaaca tgtggctggg cgcagcggct cacgcctgtt
2761 atcccaacac tttgggaggc cgaggcaggc ggagcaccta agttggggag ttcaagacct
2821 gcctgaccaa cgtggagaaa ctccgtctcc actaaaatac aaaattagct gggtgtggtg
2881 gcacatgcct gtaatatcag ctactcagga ggctgaggca ggagaattgc ttgaacccag
2941 gaggtggagt ttgcagtgag ctgagatcac accattgcac tccagcctgg gcaaaaagag
3001 caaaactctc cctaaaaaaa aaatgtagaa tatctcttaa gatttccgtt atggtaaaaa
3061 ccatatgcaa taaatacctc attgtaagct tacccaaaat tgatagatgt caacctttta
3121 acagaagaac agaagtttaa gttattgttt aatgtaatca gttttcattt taatatcttt
3181 gaaatctttt tcaaaggact gtagttttgt aatggacttt tcaagccttc cttccattgt
3241 ttttcttccg ttcactggct ccacacgttt cctggggagt agcctggaat ttaaagttgg
3301 gtgcaggttt tagaaagctg ttgctgttaa caataattct cccggccatc tccactccac
3361 tactcaaaaa tgcctgaatc cttgctcaga ggagcaaagg tatcttctcg tccctttctt
3421 acagccattt tcttgctttt ccacaaagat attatttaaa gtggaatatt tttgtaactg
3481 ggataccaat gagcttttcg gtcttttcct gacttggtaa ggtttatggg tttctaaatc
3541 taataactac agtcatacca ccccgaaaaa aaaaaaaaaa a
//