LOCUS BC036193 3099 bp mRNA linear HUM 08-JUL-2008
DEFINITION Homo sapiens calcium homeostasis modulator 1, mRNA (cDNA clone
MGC:39514 IMAGE:5262638), complete cds.
ACCESSION BC036193
VERSION BC036193.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3099)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3099)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47777332.
FEATURES Location/Qualifiers
source 1..3099
/db_xref="H-InvDB:HIT000051641"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39514 IMAGE:5262638"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3099
/gene="CALHM1"
/db_xref="GeneID:255022"
/db_xref="HGNC:HGNC:23494"
CDS 138..1178
/gene="CALHM1"
/codon_start=1
/product="calcium homeostasis modulator 1"
/protein_id="AAH36193.1"
/db_xref="GeneID:255022"
/db_xref="HGNC:HGNC:23494"
/translation="MMDKFRMIFQFLQSNQESFMNGICGIMALASAQMYSAFDFNCPC
LPGYNAAYSAGILLAPPLVLFLLGLVMNNNVSMLAEEWKRPPGRRAKDPAVLRYMFCS
MAQRALIAPVVWVAVTLLDGKCFLCAFCTAVPVSALGNGSLAPGLPAPELARLLARVP
CPEIYDGDWLLAREVAVRYLRCISQALGWSFVLLTTLLAFVVRSVRPCFTQAAFLKSK
YWSHYIDIERKLFDETCTEHAKAFAKVCIQQFFEAMNHDLELGHTNGTLATAPASAAA
PTTPDGAEEEREKLRGITDQGTMNRLLTSWHKCKPPLRLGQEEPPLMGNGWAGGGPRP
PRKEVATYFSKV"
BASE COUNT 710 a 846 c 902 g 641 t
ORIGIN
1 ctctgctctg agctctgttg gtcccagcca ggagagcccg agtcatgagg tgggcaccca
61 gtgggcaggg tgggcagcag gggccctctt ggaggcagca gtgagttggg aagaggaggc
121 cgggccccac agcgggcatg atggacaagt tccggatgat cttccagttc ctgcagtcca
181 accaggagtc cttcatgaat ggcatctgtg gcatcatggc cctggccagt gcccagatgt
241 actcggcctt cgacttcaac tgcccctgcc tgccgggcta caatgcggcc tacagcgcgg
301 gcatcctgct ggcgccaccc ctggtgctct ttctgcttgg cctggtcatg aacaacaacg
361 tgtccatgct ggccgaagag tggaagcggc caccgggccg ccgggccaag gaccccgctg
421 tgttgcgcta catgttctgc tccatggccc agcgcgccct catcgcgcct gtcgtctggg
481 tggccgtcac gctactcgac ggcaaatgct tcctctgtgc cttctgcact gccgtgcccg
541 tgagcgcact gggcaacggc agcctggcac ccggccttcc tgcccccgag ctcgcccgcc
601 tgctggcccg ggtgccctgc cctgagatct acgatggcga ctggctgttg gcccgagagg
661 tggccgtgcg ttacctccgc tgcatctccc aggcgctggg ctggtccttc gtgctgctga
721 ccactctgct ggcattcgtg gtgcgctctg tgcggccctg cttcacgcag gccgccttcc
781 tcaagagcaa gtactggtcc cactatatcg acatcgagcg caagctcttc gacgagacgt
841 gcacggagca cgccaaagcc tttgccaagg tctgcatcca gcagttcttc gaggccatga
901 accatgacct ggagctgggt cacaccaacg ggacactggc cacggcccct gcttccgcag
961 ctgcccccac gacccccgat ggtgcggagg aggaaaggga gaagctgcgt ggcatcacgg
1021 atcaaggcac catgaacagg ctgctcacga gctggcacaa atgcaaaccg cctctgcggc
1081 tgggccagga ggagccaccg ctgatgggca acggctgggc tgggggtggg ccccggcctc
1141 cgcgtaagga ggtggccacc tacttcagca aagtgtgagg cgtggccagc tgaagaggca
1201 ggaacgggga tctgagccca cagcccctcc aacccccaaa ccaggtggaa aaaggaaggg
1261 tttcggtgct gggcagtact cccctaggca gatccacact ccgtagcact cgcctgccca
1321 ttggaggcag gaaatttgga gctggaaggg gatctgatgc cttcaggtgt gacactgccc
1381 tggatggccc tagggcagtg ggcccatgag cagtattagt ctaaaggggt cggaactgtc
1441 atggcaggta cagggaccaa tggctcccct ctgcccagcc cttcccaggc tgatgttcac
1501 tgtctcctcc caggttcaac agacatccct gcaccagggt ccaccctcgt ctgtggctgt
1561 tcagtacctc tcttccttta tgctccgggc tcggggagtg ggaatcatca ggcgtctcat
1621 gaagtgggag ccctctgatt tgggcaagcg tgtcgtaggt gagactgggt gtgccggggc
1681 aggtccataa ggacatgaca cacagcctac atggtgtgac acacctgggg tgacaggcga
1741 tgagacaaga tgtcagaagc taggttcaca tggaagaggt cagagtgtgt ggtcaccatg
1801 ggggtcatgt gacaattgtc caggtggact gcatgtttat ttagcacaaa ccaagcacaa
1861 aagtcctcct gtagaggggt ctttgaaaaa ccaccttaat acccacgtca catccaggtc
1921 tccaggggaa atcagaccat ccccaaggct tgagaagtta gacacagaag ctgaagtctc
1981 tccatttttc tcaaagaccc cacctcttgg ggatggagtt ctaagaggct aagaggagct
2041 ccaaggctct agcccaggtg ggatgagggt ggaggagagc agtgtaaaga gaaagcagct
2101 cagattccag agtgagacag aactgggtca aatggtgtct ctaccactca caaaccctgt
2161 ccctgggcca gctgcatcac tgcctgtgcc ttcgtttctt catctataca atgaggatga
2221 ggcccccccg gcccgccatc atggggttgc tgtgtgtaaa agcacatggc acatagtagg
2281 cacccagcac agggtggcta atgtatttgt tgatttctga acctaaggac ttccttcctc
2341 ctcccctggg cagggatgag acagcaacac aaacactcga gcttccatct tgttgaggag
2401 gaaacagagg tacagatagg tttctcagca ccgccctcag ctctgagaca taagtcccaa
2461 gcatctaagg attcattttg atcttggcat gattccatcc ttttttatcc atccttccct
2521 ctattcccac ttctggggtc cagtttccct cctcttaatt atttgggagg agttgctcag
2581 atctttgtgg gccaaggtgg gctgggaggg ctcttccagg aggtaggagt tggtatgggc
2641 cctgaagtca gggaggatta ggatgagcaa aaaacaaggt gtatgttggt gggtggcagc
2701 acttccagtg ggaagagaag gcccggaggt atcaggaggt acaaatgtga tgaagagcaa
2761 agctttgggt caggcacacc tgagttcaaa taccagcact gcaggacttg tggccagtca
2821 cccagccact ctaagcctca gtgtgtctgt ctataaaatg gatattagaa gacctgcttg
2881 gccaggcgga gtggctcatg cctgtaatcc cagcacttgg gaggccaagg agggaggatc
2941 acttgagcct gggagttgga gaccagcctg ggcaacatag caagactctg tctctgtaaa
3001 gtaataataa taataataag aagaagaaga agaataaaga gaagatttat aattttaaaa
3061 aaaaaaaaaa aaaaaaaaaa aagaaaaaaa aaaaaaaaa
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