LOCUS BC036123 3219 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small ArfGAP 1, mRNA (cDNA clone MGC:33992 IMAGE:5313112), complete cds. ACCESSION BC036123 VERSION BC036123.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3219) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3219) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 48 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..3219 /db_xref="H-InvDB:HIT000051637" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33992 IMAGE:5313112" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3219 /gene="SMAP1" /gene_synonym="SMAP-1" /db_xref="GeneID:60682" /db_xref="HGNC:HGNC:19651" /db_xref="MIM:611372" CDS 107..1510 /gene="SMAP1" /gene_synonym="SMAP-1" /codon_start=1 /product="small ArfGAP 1" /protein_id="AAH36123.1" /db_xref="GeneID:60682" /db_xref="HGNC:HGNC:19651" /db_xref="MIM:611372" /translation="MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWA SWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANL PENFRRPQTDQAVEFFIRDKYEKKKYYDKNAIAITNISSSDAPLQPLVSSPSLQAAVD KNKLEKEKEKKKEEKKREKEPEKPAKPLTAEKLQKKDQQLEPKKSTSPKKAAEPTVDL LGLDGPAVAPVTNGNTTVPPLNDDLDIFGPMISNPLPATVMPPAQGTPSAPAAATLST VTSGDLDLFTEQTTKSEEVAKKQLSKDSILSLYGTGTIQQQSTPGVFMGPTNIPFTSQ APAAFQGFPSMGVPVPAAPGLIGNVMGQSPSMMVGMPMPNGFMGNAQTGVMPLPQNVV GHQGGMVGQMGAPQSKFGLPQAQQPQWSLSQMNQQMAGMSISSATPTAGFGQPSSTTA GWSGSSSGQTLSTQLWK" BASE COUNT 995 a 713 c 658 g 853 t ORIGIN 1 gagtccgccc gcggtcccgg cggcgccagg tgcgttcact ctgcccggct ccagccagcg 61 tccgccgccg ccgtagctgc cccaggctcc ccgccccgct gccgagatgg cgacgcgctc 121 ctgtcgggag aaggctcaga agctgaacga gcagcaccag ctcatcctat ccaagcttct 181 gagggaggag gacaacaagt actgcgccga ctgcgaggcc aaaggtcctc gatgggcttc 241 ctggaatatt ggtgtgttta tttgcatcag atgtgctgga attcatagaa atcttggggt 301 tcatatatcc agggtcaaat cagtcaacct agaccaatgg acagcagaac agatacagtg 361 catgcaagat atgggaaata ctaaagcaag actactctat gaagccaatc ttccagagaa 421 ctttcgaaga ccacagacag atcaagcagt ggaatttttc atcagagata aatatgaaaa 481 gaagaaatac tacgataaaa atgccatagc tattacaaat atttcctcct ctgatgctcc 541 tcttcagcct ttggtatcct ctccttctct gcaagctgct gttgacaaaa ataaattgga 601 gaaagaaaag gaaaaaaaaa aggaagagaa aaagagagaa aaggagccag aaaagccggc 661 aaaaccactt acagctgaaa agctgcagaa gaaagatcag caactggagc ctaaaaaaag 721 taccagccct aaaaaagctg cggagcccac tgtggatctt ttaggacttg atggccctgc 781 tgtggcacca gtgaccaacg ggaacacaac ggtgccaccc ctgaacgatg atctggacat 841 ctttggaccg atgatttcta atcccttacc tgcaactgtc atgcccccag ctcaggggac 901 accctctgca ccagcagctg caaccctgtc tacagtaaca tctggggatc tagatttatt 961 cactgagcaa actacaaaat cagaagaagt ggcaaagaaa caactttcca aagactccat 1021 cttatctctg tatggcacag gaaccattca acagcaaagt actcctggtg tatttatggg 1081 acccacaaat ataccattta cctcacaagc accagctgca tttcagggct ttccatcgat 1141 gggcgtgcct gtgcctgcag ctcctggcct tataggaaat gtgatgggac agagtccaag 1201 catgatggtg ggcatgccca tgcccaatgg gtttatggga aatgcacaaa ctggtgtgat 1261 gccacttcct cagaacgttg ttggccacca aggaggaatg gtgggacaaa tgggtgcacc 1321 ccagagtaag tttggcctgc cgcaagctca gcagccccag tggagcctct cacagatgaa 1381 tcagcagatg gctggcatga gtatcagtag tgcaacccct actgcaggtt ttggccagcc 1441 ctccagcaca acagcaggat ggtctggaag ctcatcaggt cagactctca gcacacaact 1501 gtggaaatga aaactgcaat acaagtttca tccagaacta ccacctgaca ttccttgctg 1561 aaacgcatct agttcccctg tttattcata tgcatacttt ttttcttttt acccatttgt 1621 tcatattaag aatgatctga ttgaccgtgt tggtctgtac tgattcaatt tgatgtggtg 1681 aaaagcaggt tgataaatca ttttatgtca agggcagctt tgctcatatt tcccatgatt 1741 tcatgtactg cattatttga gaagctgctc aacttgcaaa atcagttttc ctctcaataa 1801 aattatagct ctaatgtttg cttataaggg aagtagttat catgttagta atacctctaa 1861 tagtataaac cccaccccaa aattagccag taatcctgta ggaaggtact gtatgatcaa 1921 atgtttaatc atataaatag aatgtaaatg tctcactgag cactgttttc tagtgtatca 1981 aaatgctctt atttcatcat tcacttcact gtgctgttgt tatgatgtgc ttaacaggga 2041 acgtgattag tgaaaggaag ataaacgtgg atgttactcc aaaacttcgt ttaatgaatg 2101 cttaaagaat tcagatttta tctgcctctc ttgtaatttg gatctcttct taatgtacat 2161 agtgctaaca tgaagacctt tttctgcact atatgcaaac agggtaacta actaaaacaa 2221 agccactttc aatcttcaat ccttgaaggt atatctaggt ttatgacagt aattgtgttt 2281 acattttatg gtgcctagta ttgacaaaat gttatttcac tacattaaac atgactccat 2341 agaccttttc atttgtgggt ttttatttcc tatgatgtat actgccacta accttccaaa 2401 aattacttag tattgcaaag tcaggaatca tcaggaacgt ttagctgaca aaatacttgt 2461 ctgttttaaa aacctgttca agtctaccaa cctgttcaag tctaccaatt ataagggcaa 2521 attggagaaa aagaaaaaat atatactcaa gagtggtatc ttgcagtatc ggcactgtac 2581 aaaaaaatct tccaatttag ttgttgtaga gaaaacatgc agaacaaatg aagacaaaac 2641 atacattttg taccaaccat ccaattagct tatgttaact gacaagctcc atttaaacag 2701 atgtccatca gatgacaaga aaggctgctg tactgaagta aaacaaacaa tacctgaatg 2761 ctctgtagcc taaactccaa acatcctctt ccatatggat ccactggctg gacaaactgc 2821 accagttgct gcttcaattt atacctcaat tttcactgtg tccaggtggt actttggctc 2881 gttggctaga ttaaccttct ctgtccgagt gtgccacacg agaacctgaa ggggaaggaa 2941 atagcttggg tagcgcactc ttcatggtga cactcgaggt cgggcagcac aagtgtaatg 3001 aataccttag tgcagttatt tgctttcggt tccagttctt cgactgttgt tatctgtttg 3061 agaaagtcag attcttgcat ccctggctgg gatccacgac gcttaaatac agcttttgga 3121 ttggacaaaa tgacttgaag acttacagca aatcctttgt gaaaaataaa aaaaaaaaag 3181 agactttaaa aaaaaaaaaa aacaaaaaaa aaaaaaaaa //